Bgee: Gene Expression Evolution

This is a previous release of Bgee. Access last version of Bgee.

Data sources used in this release of Bgee

Data sourceVersion used release dateVersion used detailsDescriptionCategory
Ensembl 19 Oct 2012 Release 69 Source for genes definition, genes families and genes homology relations, mappings to the Gene Ontology, mappings to Affymetrix probeset IDs, and cross-references to other databases
miRBase Release 19 Source for miRNA families
ZFIN 07 Nov 2012 Zebrafish in situ data source In situ data source
MGI 14 Nov 2012 MGI 5.10.03 Mouse in situ data source In situ data source
BDGP 02 Nov 2012 Partial integration of "Release 3 + updates" Drosophila in situ data source In situ data source
Xenbase 17 Nov 2012 2.8.1 Xenopus in situ data source In situ data source
ArrayExpress Affymetrix data source for various species Affymetrix data source
GEO Affymetrix data source for various species Affymetrix data source
Unigene EST data source for various species EST data source
smiRNAdb v2 EST data for miRNAs EST data source
SRA RNA-Seq data source for various species RNA-Seq data source
Abstract human embryonic anatomy modified by Aitken 08 Apr 2005 Embryonic human anatomical ontology Ontology
eVoc adult human anatomy 30 Mar 2007 eVoc 2.9 Adult human anatomical ontology Ontology
Abstract mouse embryonic anatomy modified by Aitken 08 Apr 2005 Embryonic mouse anatomical ontology Ontology
Mouse adult gross anatomy 15 Jul 2011 Adult mouse anatomical ontology Ontology
Zebrafish anatomy and development 01 Oct 2012 CVS version: 1.46 Zebrafish anatomical ontology Ontology
Xenopus anatomy and development 14 Oct 2011 Version 2.0.7 Xenopus anatomical ontology Ontology
Drosophila gross anatomy 27 Jul 2012 CVS version 1.45 Drosophila anatomical ontology Ontology
Drosophila development 19 Oct 2009 CVS version 1.17 Drosophila developmental ontology Ontology
Filtered Gene Ontology 06 Nov 2012 data-version: 2012-11-07 Ontology

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