More result(s)

Gene expression calls

This page provides calls of baseline presence/absence of expression, and of differential over-/under-expression, either in single species, or made comparable between multiple species. Click on a species or a group of species to browse files available for download. It is possible to download these data directly into R using our R package. See also processed expression values. All data are available under the Creative Commons Zero license (CC0).

Single-species(click on species to see more details)

*D. pseudoobscura*
Drosophila pseudoobscura

Hierarchical orthologous groups

See documentation

1	2	3
OMA ID	Gene ID	Gene name

This file provides groups of genes orthologous between the selected taxa.

Presence/Absence of expression

See documentation

Not enough data

1	2	3	4	5	6	7	8	9
Gene ID	Gene name	Anatomical entity ID	Anatomical entity name	Developmental stage ID	Developmental stage name	Expression	Call quality	Expression rank

Gene ID

Gene name

Anatomical entity ID

Anatomical entity name

Developmental stage ID

Developmental stage name

Expression

Call quality

Expression rank

Including observed data

Affymetrix data

Affymetrix experiment count showing expression of this gene in this condition or in sub-conditions with a high quality

Affymetrix experiment count showing expression of this gene in this condition or in sub-conditions with a low quality

Affymetrix experiment count showing absence of expression of this gene in this condition or valid parent conditions with a high quality

Affymetrix experiment count showing absence of expression of this gene in this condition or valid parent conditions with a low quality

Including Affymetrix observed data

EST data

EST experiment count showing expression of this gene in this condition or in sub-conditions with a high quality

EST experiment count showing expression of this gene in this condition or in sub-conditions with a low quality

Including EST observed data

In situ data

In situ hybridization experiment count showing expression of this gene in this condition or in sub-conditions with a high quality

In situ hybridization experiment count showing expression of this gene in this condition or in sub-conditions with a low quality

In situ hybridization experiment count showing absence of expression of this gene in this condition or valid parent conditions with a high quality

In situ hybridization experiment count showing absence of expression of this gene in this condition or valid parent conditions with a low quality

Including in situ observed data

RNA-Seq data

RNA-Seq experiment count showing expression of this gene in this condition or in sub-conditions with a high quality

RNA-Seq experiment count showing expression of this gene in this condition or in sub-conditions with a low quality

RNA-Seq experiment count showing absence of expression of this gene in this condition or valid parent conditions with a high quality

RNA-Seq experiment count showing absence of expression of this gene in this condition or valid parent conditions with a low quality

Including RNA-Seq observed data

Over-/Under-expression

See documentation

Improvement of these files is in progress

Multi-species(orthologous genes in homologous anatomical structures)

These files will be available in a future release.

Images from Wikimedia Commons. In most cases, pictures corresponds to the sequenced strains. Show information about original images.

Homo sapiens picture by Leonardo da Vinci (Life time: 1519) [Public domain]. See H. sapiens picture via Wikimedia Commons

Mus musculus picture by Rasbak [GFDL or CC-BY-SA-3.0], See M. musculus picture via Wikimedia Commons

Danio rerio picture by Azul (Own work) [see page for license], See D. rerio picture via Wikimedia Commons

Drosophila melanogaster picture by André Karwath aka Aka (Own work) [CC-BY-SA-2.5], See D. melanogaster picture via Wikimedia Commons

Caenorhabditis elegans picture by Bob Goldstein, UNC Chapel Hill http://bio.unc.edu/people/faculty/goldstein/ (Own work) [CC-BY-SA-3.0], See C. elegans picture via Wikimedia Commons

Pan troglodytes picture by Thomas Lersch (Own work) [GFDL, CC-BY-SA-3.0 or CC-BY-2.5], See P. troglodytes picture via Wikimedia Commons

Pan paniscus picture by Ltshears (Own work) [CC-BY-SA-3.0 or GFDL], See P. paniscus picture via Wikimedia Commons

Gorilla gorilla picture by Brocken Inaglory (Own work) [CC-BY-SA-3.0 or GFDL], See G. gorilla picture via Wikimedia Commons

Macaca mulatta picture by Aiwok (Own work) [GFDL or CC-BY-SA-3.0-2.5-2.0-1.0], See M. mulatta picture via Wikimedia Commons

Rattus norvegicus picture by Reg Mckenna (originally posted to Flickr as Wild Rat) [CC-BY-2.0], See R. norvegicus picture via Wikimedia Commons

Bos taurus picture by User Robert Merkel on en.wikipedia (US Department of Agriculture) [Public domain], See B. taurus picture via Wikimedia Commons

Sus scrofa picture by Joshua Lutz (Own work) [Public domain], See S. scrofa picture via Wikimedia Commons

Equus caballus picture by Doug Antczak Baker Institute for Animal Health College of Veterinary Medicine Cornell University [Public Domain], See E. caballus picture via Wikimedia Commons

Oryctolagus cuniculus picture by JJ Harrison (Own work) [CC-BY-SA-3.0], See O. cuniculus picture via Wikimedia Commons

Canis lupus familiaris picture by Mood210 (Own work) [CC-BY-SA-3.0], See C. lupus familiaris picture via Wikimedia Commons

Felis catus picture [CC-BY-SA-3.0], See F. catus picture via Wikimedia Commons

Cavia porcellus picture by Variraptor (Own work) [CC-BY-SA-3.0], See C. porcellus picture via Wikimedia Commons

Erinaceus europaeus picture by Michael Gäbler (Own work) [CC-BY-SA-3.0], See E. europaeus picture via Wikimedia Commons

Monodelphis domestica picture by Marsupial Genome Sheds Light on the Evolution of Immunity. Hill E, PLoS Biology Vol. 4/3/2006, e75 http://dx.doi.org/10.1371/journal.pbio.0040075 [CC-BY-2.5], See M. domestica picture via Wikimedia Commons

Ornithorhynchus anatinus picture by Dr. Philip Bethge (private) [GFDL or CC-BY-SA-3.0-2.5-2.0-1.0], See O. anatinus picture via Wikimedia Commons

Gallus gallus picture by Subramanya C K (Own work) [CC-BY-SA-3.0], See G. gallus picture via Wikimedia Commons

Anolis carolinensis picture by PiccoloNamek (Moved from Image:P1010027.jpg) [GFDL or CC-BY-SA-3.0], See A. carolinensis picture via Wikimedia Commons

Xenopus tropicalis picture by Václav Gvoždík (http://calphotos.berkeley.edu) [CC-BY-SA-2.5, CC-BY-SA-2.5 or CC-BY-SA-3.0], See X. tropicalis picture via Wikimedia Commons

Drosophila ananassae picture by Nicolas Gompel [CC BY-NC-SA 2.0 FR], See D. ananassae picture via Nicolas Gompel's lab website

Drosophila mojavensis picture by Nicolas Gompel [CC BY-NC-SA 2.0 FR], See D. mojavensis picture via Nicolas Gompel's lab website

Drosophila pseudoobscura picture, See D. pseudoobscura picture via Ensembl Metazoa

Drosophila simulans picture by Nicolas Gompel [CC BY-NC-SA 2.0 FR], See D. simulans picture via Nicolas Gompel's lab website

Drosophila virilis picture by Nicolas Gompel [CC BY-NC-SA 2.0 FR], See D. virilis picture via Nicolas Gompel's lab website

Drosophila yakuba picture by Nicolas Gompel [CC BY-NC-SA 2.0 FR], See D. yakuba picture via Nicolas Gompel's lab website