We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
hypothalamus 1.0071.495 genes 0 gene
13 genes 5 species 0 species
UBERON:0001898501350
gastrula 0.0019.271 gene 1 gene 16 genes 1 species 1 species UBERON:0004734111611
gingival epithelium -1.0042.370 gene
1 gene 17 genes 0 species
1 species UBERON:0001949011701
midbrain 1.0073.022 genes 0 gene
16 genes 2 species 0 species
UBERON:0001891201620
retinal neural layer 1.0075.881 gene 0 gene
17 genes 1 species 0 species
UBERON:0003902101710
hindbrain 1.0075.5413 genes 0 gene
5 genes 13 species 0 species
UBERON:00020281305130
stomach 0.0046.503 genes 3 genes 12 genes 3 species 3 species UBERON:0000945331233
pituitary gland 1.0081.765 genes 0 gene
13 genes 5 species 0 species
UBERON:0000007501350
female reproductive system 1.0041.518 genes 0 gene
10 genes 8 species 0 species
UBERON:0000474801080
inferior vagus X ganglion -1.0041.560 gene
1 gene 17 genes 0 species
1 species UBERON:0005363011701
pancreas 0.0047.702 genes 2 genes 14 genes 2 species 2 species UBERON:0001264221422
upper leg skin -1.0041.490 gene
1 gene 17 genes 0 species
1 species UBERON:0004262011701
limb, paired fin 1.0031.483 genes 0 gene
15 genes 3 species 0 species
UBERON:0002101, UBERON:0002534301530
putamen 1.0051.591 gene 0 gene
17 genes 1 species 0 species
UBERON:0001874101710
eyeball of camera-type eye 1.0019.844 genes 0 gene
14 genes 4 species 0 species
UBERON:0010230401440
right ovary -1.0029.970 gene
1 gene 17 genes 0 species
1 species UBERON:0002118011701
testis 0.1189.8410 genes 8 genes 0 gene
10 species 8 species UBERON:00004731080108
autopod skin -1.0023.640 gene
1 gene 17 genes 0 species
1 species UBERON:0015790011701
multi-cellular organism 1.0041.9918 genes 0 gene
0 gene
18 species 0 species
UBERON:00004681800180
ventricular zone 0.0059.131 gene 1 gene 16 genes 1 species 1 species UBERON:0003053111611
embryonic post-anal tail -1.0018.060 gene
2 genes 16 genes 0 species
2 species UBERON:0007144021602
fibroblast -1.0044.600 gene
3 genes 15 genes 0 species
3 species CL:0000057031503
mesonephros -1.0014.950 gene
1 gene 17 genes 0 species
1 species UBERON:0000080011701
head 1.0041.366 genes 0 gene
12 genes 6 species 0 species
UBERON:0000033601260
tongue muscle -1.0012.560 gene
1 gene 17 genes 0 species
1 species UBERON:0000378011701
trigeminal ganglion -1.0041.590 gene
1 gene 17 genes 0 species
1 species UBERON:0001675011701
forebrain 1.0065.3212 genes 0 gene
6 genes 12 species 0 species
UBERON:00018901206120
vertebral column -1.0046.040 gene
1 gene 17 genes 0 species
1 species UBERON:0001130011701
caecum -0.3341.141 gene 2 genes 15 genes 1 species 2 species UBERON:0001153121512
heart left ventricle, primary heart field -0.3328.551 gene 2 genes 15 genes 1 species 2 species UBERON:0002084, UBERON:0004140121512
olfactory bulb 1.0073.632 genes 0 gene
16 genes 2 species 0 species
UBERON:0002264201620
lens of camera-type eye 1.0064.321 gene 0 gene
17 genes 1 species 0 species
UBERON:0000965101710
brain 1.0076.7218 genes 0 gene
0 gene
18 species 0 species
UBERON:00009551800180
smooth muscle tissue -1.0028.980 gene
3 genes 15 genes 0 species
3 species UBERON:0001135031503
heart right ventricle -1.0041.760 gene
2 genes 16 genes 0 species
2 species UBERON:0002080021602
lip -1.0038.530 gene
1 gene 17 genes 0 species
1 species UBERON:0001833011701
skin of hip -1.0048.070 gene
1 gene 17 genes 0 species
1 species UBERON:0001554011701
female gonad -0.0841.536 genes 7 genes 5 genes 6 species 7 species UBERON:000099267567
mitral valve -1.0011.490 gene
1 gene 17 genes 0 species
1 species UBERON:0002135011701
ileum -1.0036.300 gene
4 genes 14 genes 0 species
4 species UBERON:0002116041404
cartilage tissue 0.0042.051 gene 1 gene 16 genes 1 species 1 species UBERON:0002418111611
thyroid gland -1.0030.940 gene
3 genes 15 genes 0 species
3 species UBERON:0002046031503
adenohypophysis 1.0052.142 genes 0 gene
16 genes 2 species 0 species
UBERON:0002196201620
larva 1.0027.301 gene 0 gene
17 genes 1 species 0 species
UBERON:0002548101710
cerebellum 1.0070.8513 genes 0 gene
5 genes 13 species 0 species
UBERON:00020371305130
fundus of stomach -1.0039.570 gene
1 gene 17 genes 0 species
1 species UBERON:0001160011701
cardiac ventricle 0.0041.651 gene 1 gene 16 genes 1 species 1 species UBERON:0002082111611
caudal tuberculum, substantia nigra 1.0052.451 gene 0 gene
17 genes 1 species 0 species
UBERON:2000633, UBERON:0002038101710
choroid plexus -1.0023.420 gene
1 gene 17 genes 0 species
1 species UBERON:0001886011701
thymus -1.0043.590 gene
5 genes 13 genes 0 species
5 species UBERON:0002370051305
tendon -1.0041.880 gene
1 gene 17 genes 0 species
1 species UBERON:0000043011701
right cardiac atrium -1.008.440 gene
1 gene 17 genes 0 species
1 species UBERON:0002078011701
endocardial endothelium -1.0012.040 gene
1 gene 17 genes 0 species
1 species UBERON:0005316011701
Ammon's horn 1.0076.284 genes 0 gene
14 genes 4 species 0 species
UBERON:0001954401440
epiblast (generic) -1.0017.630 gene
1 gene 17 genes 0 species
1 species UBERON:0002532011701
adrenal cortex 1.0041.812 genes 0 gene
16 genes 2 species 0 species
UBERON:0001235201620
brainstem 1.0077.393 genes 0 gene
15 genes 3 species 0 species
UBERON:0002298301530
retina 0.5079.223 genes 1 gene 14 genes 3 species 1 species UBERON:0000966311431
aorta 0.3341.772 genes 1 gene 15 genes 2 species 1 species UBERON:0000947211521
right kidney -1.0015.290 gene
1 gene 17 genes 0 species
1 species UBERON:0004539011701
intestine 0.2050.813 genes 2 genes 13 genes 3 species 2 species UBERON:0000160321332
esophagus 0.0047.142 genes 2 genes 14 genes 2 species 2 species UBERON:0001043221422
myocardium 0.0042.451 gene 1 gene 16 genes 1 species 1 species UBERON:0002349111611
blastula 0.3326.672 genes 1 gene 15 genes 2 species 1 species UBERON:0000307211521
right testis -1.0027.000 gene
1 gene 17 genes 0 species
1 species UBERON:0004534011701
blood -0.7136.431 gene 6 genes 11 genes 1 species 6 species UBERON:0000178161116
adipose tissue -0.2042.132 genes 3 genes 13 genes 2 species 3 species UBERON:0001013231323
embryonic head 1.0026.701 gene 0 gene
17 genes 1 species 0 species
UBERON:0008816101710
skeletal muscle tissue -0.6750.102 genes 10 genes 6 genes 2 species 10 species UBERON:00011342106210
spleen -1.0043.650 gene
10 genes 8 genes 0 species
10 species UBERON:00021060108010
kidney -0.1754.595 genes 7 genes 6 genes 5 species 7 species UBERON:000211357657
pericardium 0.0041.831 gene 1 gene 16 genes 1 species 1 species UBERON:0002407111611
lung, swim bladder 0.0044.666 genes 6 genes 6 genes 6 species 6 species UBERON:0002048, UBERON:000686066666
cardiac atrium -1.0041.810 gene
2 genes 16 genes 0 species
2 species UBERON:0002081021602
islet of Langerhans 1.0066.282 genes 0 gene
16 genes 2 species 0 species
UBERON:0000006201620
neural tube 1.0079.822 genes 0 gene
16 genes 2 species 0 species
UBERON:0001049201620
pigmented layer of retina -1.0040.590 gene
1 gene 17 genes 0 species
1 species UBERON:0001782011701
cerebellar cortex 1.0073.383 genes 0 gene
15 genes 3 species 0 species
UBERON:0002129301530
heart -0.5035.414 genes 12 genes 2 genes 4 species 12 species UBERON:00009484122412
liver -0.6734.193 genes 15 genes 0 gene
3 species 15 species UBERON:00021073150315
colon -0.5039.242 genes 6 genes 10 genes 2 species 6 species UBERON:0001155261026
left testis -1.0028.570 gene
1 gene 17 genes 0 species
1 species UBERON:0004533011701
muscle organ 0.6716.905 genes 1 gene 12 genes 5 species 1 species UBERON:0001630511251
striatum 1.0074.802 genes 0 gene
16 genes 2 species 0 species
UBERON:0002435201620
neurohypophysis -1.0032.070 gene
1 gene 17 genes 0 species
1 species UBERON:0002198011701
dorsal root ganglion -1.0041.660 gene
1 gene 17 genes 0 species
1 species UBERON:0000044011701
gall bladder -1.0044.130 gene
2 genes 16 genes 0 species
2 species UBERON:0002110021602
parathyroid gland, pharyngeal gill -1.0013.270 gene
1 gene 17 genes 0 species
1 species UBERON:0001132, UBERON:0000206011701
gingiva -1.0039.270 gene
1 gene 17 genes 0 species
1 species UBERON:0001828011701
peritoneum -1.0041.410 gene
1 gene 17 genes 0 species
1 species UBERON:0002358011701
zygote 1.0077.201 gene 0 gene
17 genes 1 species 0 species
CL:0000365101710
medulla oblongata 1.0080.272 genes 0 gene
16 genes 2 species 0 species
UBERON:0001896201620
pylorus -1.0041.490 gene
1 gene 17 genes 0 species
1 species UBERON:0001166011701
caudate nucleus 1.0052.441 gene 0 gene
17 genes 1 species 0 species
UBERON:0001873101710
embryo 1.0043.1610 genes 0 gene
8 genes 10 species 0 species
UBERON:00009221008100
left ovary -1.0030.270 gene
1 gene 17 genes 0 species
1 species UBERON:0002119011701

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