We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
otic placode 1.0055.611 gene 0 gene
6 genes 1 species 0 species
UBERON:000306910610
neocortex 0.6064.444 genes 1 gene 2 genes 3 species 1 species UBERON:000195041231
substantia nigra 0.0059.101 gene 1 gene 5 genes 1 species 1 species UBERON:000203811511
lymph node 0.0064.711 gene 1 gene 5 genes 1 species 1 species UBERON:000002911511
urinary bladder 0.0060.841 gene 1 gene 5 genes 1 species 1 species UBERON:000125511511
cleaving embryo 0.0063.341 gene 1 gene 5 genes 1 species 1 species UBERON:000701011511
camera-type eye 0.0061.851 gene 1 gene 5 genes 1 species 1 species UBERON:000001911511
autopod skin 0.0084.451 gene 1 gene 5 genes 1 species 1 species UBERON:001579011511
knee joint 0.0065.981 gene 1 gene 5 genes 1 species 1 species UBERON:000148511511
olfactory epithelium 0.0066.371 gene 1 gene 5 genes 1 species 1 species UBERON:000199711511
seminiferous tubule of testis 1.0084.872 genes 0 gene
5 genes 1 species 0 species
UBERON:000134320510
ileum 0.0064.592 genes 2 genes 3 genes 2 species 2 species UBERON:000211622322
hypothalamus -0.3359.781 gene 2 genes 4 genes 1 species 2 species UBERON:000189812412
thyroid gland -1.0076.180 gene
2 genes 5 genes 0 species
2 species UBERON:000204602502
bone element 0.0058.591 gene 1 gene 5 genes 1 species 1 species UBERON:000147411511
cerebellum -0.2065.982 genes 3 genes 2 genes 2 species 3 species UBERON:000203723223
zygote 0.0093.031 gene 1 gene 5 genes 1 species 1 species CL:000036511511
nervous system 1.0053.684 genes 0 gene
3 genes 3 species 0 species
UBERON:000101640330
medulla oblongata 1.0051.481 gene 0 gene
6 genes 1 species 0 species
UBERON:000189610610
cardiac ventricle 0.0065.841 gene 1 gene 5 genes 1 species 1 species UBERON:000208211511
cornea 0.0055.111 gene 1 gene 5 genes 1 species 1 species UBERON:000096411511
hindbrain 0.3382.912 genes 1 gene 4 genes 2 species 1 species UBERON:000202821421
chordate pharynx -1.0057.880 gene
1 gene 6 genes 0 species
1 species UBERON:000104201601
embryonic post-anal tail 0.0080.521 gene 1 gene 5 genes 1 species 1 species UBERON:000714411511
optic fissure 0.0063.701 gene 1 gene 5 genes 1 species 1 species UBERON:000541211511
ear 0.0076.811 gene 1 gene 5 genes 1 species 1 species UBERON:000169011511
peripheral nervous system 1.0059.591 gene 0 gene
6 genes 1 species 0 species
UBERON:000001010610
renal system 1.0075.323 genes 0 gene
4 genes 3 species 0 species
UBERON:000100830430
gastrocnemius 0.0070.071 gene 1 gene 5 genes 1 species 1 species UBERON:000138811511
primitive streak 0.0065.671 gene 1 gene 5 genes 1 species 1 species UBERON:000434111511
olfactory tubercle 0.0061.531 gene 1 gene 5 genes 1 species 1 species UBERON:000188311511
large intestine 0.3363.222 genes 1 gene 4 genes 2 species 1 species UBERON:000005921421
islet of Langerhans 1.0079.882 genes 0 gene
5 genes 1 species 0 species
UBERON:000000620510
olfactory bulb 0.0067.511 gene 1 gene 5 genes 1 species 1 species UBERON:000226411511
membranous labyrinth 1.0052.141 gene 0 gene
6 genes 1 species 0 species
UBERON:000184910610
appendicular skeleton 1.0063.631 gene 0 gene
6 genes 1 species 0 species
UBERON:000209110610
interventricular septum 1.0086.021 gene 0 gene
6 genes 1 species 0 species
UBERON:000209410610
epithelium of cochlear duct 0.0060.391 gene 1 gene 5 genes 1 species 1 species UBERON:000324311511
main bronchus -1.0064.990 gene
1 gene 6 genes 0 species
1 species UBERON:000218201601
prostate gland 0.0053.451 gene 1 gene 5 genes 1 species 1 species UBERON:000236711511
cerebral hemisphere 0.6065.204 genes 1 gene 2 genes 3 species 1 species UBERON:000186941231
quadriceps femoris 0.0065.292 genes 2 genes 3 genes 2 species 2 species UBERON:000137722322
right kidney 0.0075.131 gene 1 gene 5 genes 1 species 1 species UBERON:000453911511
median eminence of neurohypophysis 0.0061.471 gene 1 gene 5 genes 1 species 1 species UBERON:000219711511
vagina 1.0061.271 gene 0 gene
6 genes 1 species 0 species
UBERON:000099610610
blood vessel 1.0058.312 genes 0 gene
5 genes 2 species 0 species
UBERON:000198120520
1st arch mandibular component 0.0065.181 gene 1 gene 5 genes 1 species 1 species UBERON:000723711511
somite 1.0041.231 gene 0 gene
6 genes 1 species 0 species
UBERON:000232910610
lens of camera-type eye 0.0069.241 gene 1 gene 5 genes 1 species 1 species UBERON:000096511511
esophagus 0.0070.822 genes 2 genes 3 genes 2 species 2 species UBERON:000104322322
diencephalon 1.0053.911 gene 0 gene
6 genes 1 species 0 species
UBERON:000189410610
brainstem 0.0056.061 gene 1 gene 5 genes 1 species 1 species UBERON:000229811511
skin of external ear 0.0077.191 gene 1 gene 5 genes 1 species 1 species UBERON:000145911511
epiblast (generic) 0.0068.871 gene 1 gene 5 genes 1 species 1 species UBERON:000253211511
midbrain tegmentum 1.0060.851 gene 0 gene
6 genes 1 species 0 species
UBERON:000194310610
larynx -1.0061.750 gene
1 gene 6 genes 0 species
1 species UBERON:000173701601
intestine 0.3366.742 genes 1 gene 4 genes 2 species 1 species UBERON:000016021421
adipose tissue 0.0056.871 gene 1 gene 5 genes 1 species 1 species UBERON:000101311511
dentate gyrus of hippocampal formation 0.0064.771 gene 1 gene 5 genes 1 species 1 species UBERON:000188511511
heart 0.7179.586 genes 1 gene 0 gene
3 species 1 species UBERON:000094861031
pineal body 0.0062.041 gene 1 gene 5 genes 1 species 1 species UBERON:000190511511
pons -1.0056.230 gene
1 gene 6 genes 0 species
1 species UBERON:000098801601
cerebral cortex 0.6070.524 genes 1 gene 2 genes 3 species 1 species UBERON:000095641231
metanephric ureteric bud 0.0062.871 gene 1 gene 5 genes 1 species 1 species UBERON:000508011511
aortic valve 0.0051.251 gene 1 gene 5 genes 1 species 1 species UBERON:000213711511
ureter smooth muscle 0.0059.421 gene 1 gene 5 genes 1 species 1 species UBERON:000991911511
manus 1.0064.341 gene 0 gene
6 genes 1 species 0 species
UBERON:000239810610
globus pallidus 0.0060.021 gene 1 gene 5 genes 1 species 1 species UBERON:000187511511
utricle of membranous labyrinth 1.0058.321 gene 0 gene
6 genes 1 species 0 species
UBERON:000185310610
Ammon's horn 0.0074.511 gene 1 gene 5 genes 1 species 1 species UBERON:000195411511
1st arch maxillary component 0.0065.801 gene 1 gene 5 genes 1 species 1 species UBERON:000723811511
sciatic nerve 0.0062.381 gene 1 gene 5 genes 1 species 1 species UBERON:000132211511
aorta 0.0075.432 genes 2 genes 3 genes 2 species 2 species UBERON:000094722322
lip 1.0081.852 genes 0 gene
5 genes 1 species 0 species
UBERON:000183320510
primary visual cortex 0.0078.541 gene 1 gene 5 genes 1 species 1 species UBERON:000243611511
adrenal gland -0.3365.651 gene 2 genes 4 genes 1 species 2 species UBERON:000236912412
pigmented layer of retina 0.0064.041 gene 1 gene 5 genes 1 species 1 species UBERON:000178211511
lung 0.3388.124 genes 2 genes 1 gene 3 species 2 species UBERON:000204842132
testis 1.0099.437 genes 0 gene
0 gene
4 species 0 species
UBERON:000047370040
undifferentiated genital tubercle 0.0077.211 gene 1 gene 5 genes 1 species 1 species UBERON:000587611511
submandibular gland -1.0066.000 gene
2 genes 5 genes 0 species
1 species UBERON:000173602501
vault of skull 0.0065.951 gene 1 gene 5 genes 1 species 1 species UBERON:000433911511
meninx 1.0073.671 gene 0 gene
6 genes 1 species 0 species
UBERON:000236010610
central nervous system 0.6059.614 genes 1 gene 2 genes 3 species 1 species UBERON:000101741231
heart left ventricle -0.3373.491 gene 2 genes 4 genes 1 species 2 species UBERON:000208412412
metanephric mesenchyme 0.0061.811 gene 1 gene 5 genes 1 species 1 species UBERON:000322011511
cranium 1.0053.531 gene 0 gene
6 genes 1 species 0 species
UBERON:000312810610
saccule of membranous labyrinth 1.0051.661 gene 0 gene
6 genes 1 species 0 species
UBERON:000185410610
seminal vesicle -1.0061.560 gene
2 genes 5 genes 0 species
1 species UBERON:000099802501
saliva-secreting gland 0.0063.811 gene 1 gene 5 genes 1 species 1 species UBERON:000104411511
telencephalon 0.6069.354 genes 1 gene 2 genes 3 species 1 species UBERON:000189341231
cardiac atrium 0.0064.031 gene 1 gene 5 genes 1 species 1 species UBERON:000208111511
cranial nerve II 1.0041.101 gene 0 gene
6 genes 1 species 0 species
UBERON:000094110610
stomach 0.0070.922 genes 2 genes 3 genes 2 species 2 species UBERON:000094522322
extra-ocular muscle 0.0069.161 gene 1 gene 5 genes 1 species 1 species UBERON:000160111511
olfactory cortex 1.0056.241 gene 0 gene
6 genes 1 species 0 species
UBERON:000289410610
metanephros 0.0061.051 gene 1 gene 5 genes 1 species 1 species UBERON:000008111511
lacrimal gland -1.0060.000 gene
2 genes 5 genes 0 species
1 species UBERON:000181702501
uterine cervix -0.3359.241 gene 2 genes 4 genes 1 species 2 species UBERON:000000212412
temporalis muscle -1.0063.290 gene
2 genes 5 genes 0 species
1 species UBERON:000159802501
mammillary body 0.0059.701 gene 1 gene 5 genes 1 species 1 species UBERON:000220611511
heart right ventricle 1.0075.451 gene 0 gene
6 genes 1 species 0 species
UBERON:000208010610
myocardium of ventricle 0.0082.791 gene 1 gene 5 genes 1 species 1 species UBERON:000108311511
pancreas 0.5061.633 genes 1 gene 3 genes 2 species 1 species UBERON:000126431321
musculature 1.0065.384 genes 0 gene
3 genes 3 species 0 species
UBERON:000101540330
limb 0.5077.543 genes 1 gene 3 genes 3 species 1 species UBERON:000210131331
placenta 0.0057.191 gene 1 gene 5 genes 1 species 1 species UBERON:000198711511
iris 0.0066.451 gene 1 gene 5 genes 1 species 1 species UBERON:000176911511
diaphragm 0.0068.171 gene 1 gene 5 genes 1 species 1 species UBERON:000110311511
tongue -1.0080.150 gene
1 gene 6 genes 0 species
1 species UBERON:000172301601
secondary palatal shelf 0.0067.031 gene 1 gene 5 genes 1 species 1 species UBERON:000561911511
postcranial axial skeleton -1.0053.710 gene
1 gene 6 genes 0 species
1 species UBERON:000209001601
midbrain 0.0081.581 gene 1 gene 5 genes 1 species 1 species UBERON:000189111511
cochlea 0.0057.491 gene 1 gene 5 genes 1 species 1 species UBERON:000184411511
brain blood vessel 0.0062.001 gene 1 gene 5 genes 1 species 1 species UBERON:000349911511
gastrula 0.0068.571 gene 1 gene 5 genes 1 species 1 species UBERON:000473411511
duodenum 0.0061.202 genes 2 genes 3 genes 2 species 2 species UBERON:000211422322
trigeminal ganglion 0.0065.441 gene 1 gene 5 genes 1 species 1 species UBERON:000167511511
dermis 0.0056.421 gene 1 gene 5 genes 1 species 1 species UBERON:000206711511
masseter muscle -1.0040.710 gene
1 gene 6 genes 0 species
1 species UBERON:000159701601
middle ear -1.0063.630 gene
1 gene 6 genes 0 species
1 species UBERON:000175601601
spleen 0.5068.033 genes 1 gene 3 genes 2 species 1 species UBERON:000210631321
outflow tract 0.0067.881 gene 1 gene 5 genes 1 species 1 species UBERON:000414511511
kidney 0.0090.763 genes 3 genes 1 gene 3 species 3 species UBERON:000211333133
forelimb 1.0070.821 gene 0 gene
6 genes 1 species 0 species
UBERON:000210210610
hindlimb 1.0054.972 genes 0 gene
5 genes 2 species 0 species
UBERON:000210320520
ureter 0.0054.241 gene 1 gene 5 genes 1 species 1 species UBERON:000005611511
choroid plexus epithelium 0.0070.721 gene 1 gene 5 genes 1 species 1 species UBERON:000391111511
face 1.0060.701 gene 0 gene
6 genes 1 species 0 species
UBERON:000145610610
bone marrow 0.0055.101 gene 1 gene 5 genes 1 species 1 species UBERON:000237111511
brain 0.1485.944 genes 3 genes 0 gene
3 species 3 species UBERON:000095543033
carotid body 0.0050.991 gene 1 gene 5 genes 1 species 1 species UBERON:000162911511
ventral horn of spinal cord 0.0054.261 gene 1 gene 5 genes 1 species 1 species UBERON:000225711511
multi-cellular organism 1.0059.487 genes 0 gene
0 gene
4 species 0 species
UBERON:000046870040
blood 0.0084.922 genes 2 genes 3 genes 2 species 2 species UBERON:000017822322
cardiovascular system 1.0055.146 genes 0 gene
1 gene 3 species 0 species
UBERON:000453560130
integumental system 1.0055.142 genes 0 gene
5 genes 2 species 0 species
UBERON:000241620520
ventricular zone 0.0078.041 gene 1 gene 5 genes 1 species 1 species UBERON:000305311511
semi-lunar valve 0.0056.731 gene 1 gene 5 genes 1 species 1 species UBERON:000562311511
triceps brachii 0.0063.181 gene 1 gene 5 genes 1 species 1 species UBERON:000150911511
forebrain 0.6075.634 genes 1 gene 2 genes 3 species 1 species UBERON:000189041231
thymus 0.0067.922 genes 2 genes 3 genes 2 species 2 species UBERON:000237022322
pes 1.0061.891 gene 0 gene
6 genes 1 species 0 species
UBERON:000238710610
intestinal epithelium 1.0041.671 gene 0 gene
6 genes 1 species 0 species
UBERON:000127710610
respiratory system 1.0055.534 genes 0 gene
3 genes 3 species 0 species
UBERON:000100440330
sternocleidomastoid 0.0065.391 gene 1 gene 5 genes 1 species 1 species UBERON:000112811511
female gonad -0.1489.153 genes 4 genes 0 gene
3 species 4 species UBERON:000099234034
embryo 0.0091.002 genes 2 genes 3 genes 2 species 2 species UBERON:000092222322
epididymis 0.0063.861 gene 1 gene 5 genes 1 species 1 species UBERON:000130111511
choroid plexus 1.0062.751 gene 0 gene
6 genes 1 species 0 species
UBERON:000188610610
smooth muscle tissue 0.3383.302 genes 1 gene 4 genes 2 species 1 species UBERON:000113521421
epithelium of lens 0.0039.681 gene 1 gene 5 genes 1 species 1 species UBERON:000180311511
motor neuron -1.0042.030 gene
1 gene 6 genes 0 species
1 species CL:000010001601
jejunum 0.0062.592 genes 2 genes 3 genes 2 species 2 species UBERON:000211522322
internal ear 1.0051.441 gene 0 gene
6 genes 1 species 0 species
UBERON:000184610610
vas deferens 0.0062.441 gene 1 gene 5 genes 1 species 1 species UBERON:000100011511
renal corpuscle 0.0061.691 gene 1 gene 5 genes 1 species 1 species UBERON:000122911511
epithelium of stomach 0.0065.201 gene 1 gene 5 genes 1 species 1 species UBERON:000127611511
atrioventricular valve 0.0059.141 gene 1 gene 5 genes 1 species 1 species UBERON:000213311511
urethra -1.0058.810 gene
1 gene 6 genes 0 species
1 species UBERON:000005701601
cranial ganglion 1.0069.211 gene 0 gene
6 genes 1 species 0 species
UBERON:000171410610
uterus 0.0086.642 genes 2 genes 3 genes 2 species 2 species UBERON:000099522322
small intestine 0.3359.272 genes 1 gene 4 genes 2 species 1 species UBERON:000210821421
retina 0.0051.901 gene 1 gene 5 genes 1 species 1 species UBERON:000096611511
striatum 0.0067.241 gene 1 gene 5 genes 1 species 1 species UBERON:000243511511
calcareous tooth -1.0063.140 gene
1 gene 6 genes 0 species
1 species UBERON:000109101601
epithelium of small intestine -1.0051.830 gene
2 genes 5 genes 0 species
1 species UBERON:000190202501
dorsal root ganglion 0.0061.421 gene 1 gene 5 genes 1 species 1 species UBERON:000004411511
internal carotid artery -1.0054.180 gene
2 genes 5 genes 0 species
1 species UBERON:000153202501
trachea 1.0056.491 gene 0 gene
6 genes 1 species 0 species
UBERON:000312610610
mouth 1.0065.702 genes 0 gene
5 genes 1 species 0 species
UBERON:000016520510
intercostal muscle 0.0070.541 gene 1 gene 5 genes 1 species 1 species UBERON:000111111511
head 1.0063.952 genes 0 gene
5 genes 1 species 0 species
UBERON:000003320510
colon 0.0067.392 genes 2 genes 3 genes 2 species 2 species UBERON:000115522322
collection of basal ganglia 1.0066.651 gene 0 gene
6 genes 1 species 0 species
UBERON:001001110610
presomitic mesoderm 0.0056.911 gene 1 gene 5 genes 1 species 1 species UBERON:000305911511
metanephric collecting duct 1.0042.421 gene 0 gene
6 genes 1 species 0 species
UBERON:000473710610
skeletal muscle tissue 0.3383.304 genes 2 genes 1 gene 3 species 2 species UBERON:000113442132
male reproductive system 1.0061.907 genes 0 gene
0 gene
4 species 0 species
UBERON:000007970040
hair follicle 0.0061.801 gene 1 gene 5 genes 1 species 1 species UBERON:000207311511
eyeball of camera-type eye 0.0057.711 gene 1 gene 5 genes 1 species 1 species UBERON:001023011511
amygdala 0.0069.911 gene 1 gene 5 genes 1 species 1 species UBERON:000187611511
skin epidermis 0.0062.511 gene 1 gene 5 genes 1 species 1 species UBERON:000100311511
ear vesicle 0.0053.881 gene 1 gene 5 genes 1 species 1 species UBERON:000305111511
ciliary body -1.0062.360 gene
2 genes 5 genes 0 species
1 species UBERON:000177502501
fibroblast 0.0076.101 gene 1 gene 5 genes 1 species 1 species CL:000005711511
metanephric loop of Henle 0.0061.551 gene 1 gene 5 genes 1 species 1 species UBERON:000513011511
cerebellar cortex 0.0070.181 gene 1 gene 5 genes 1 species 1 species UBERON:000212911511
blastocyst 0.0062.291 gene 1 gene 5 genes 1 species 1 species UBERON:000035811511
liver -0.1473.043 genes 4 genes 0 gene
3 species 4 species UBERON:000210734034
endocardial cushion 0.0059.391 gene 1 gene 5 genes 1 species 1 species UBERON:000206211511
dorsal plus ventral thalamus 1.0062.751 gene 0 gene
6 genes 1 species 0 species
UBERON:000189710610
parotid gland -1.0068.180 gene
2 genes 5 genes 0 species
1 species UBERON:000183102501
neural tube 0.0082.031 gene 1 gene 5 genes 1 species 1 species UBERON:000104911511
retinal neural layer 0.0055.911 gene 1 gene 5 genes 1 species 1 species UBERON:000390211511
yolk sac 0.0065.501 gene 1 gene 5 genes 1 species 1 species UBERON:000104011511
pituitary gland -0.3367.691 gene 2 genes 4 genes 1 species 2 species UBERON:000000712412
gonad 1.0061.527 genes 0 gene
0 gene
4 species 0 species
UBERON:000099170040
mammary gland 0.0061.551 gene 1 gene 5 genes 1 species 1 species UBERON:000191111511

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