We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
lens of camera-type eye 1.0058.661 gene 0 gene
16 genes 1 species 0 species
UBERON:0000965101610
mesenchyme of testis 1.0075.001 gene 0 gene
16 genes 1 species 0 species
UBERON:0003312101610
multi-cellular organism 1.0087.5117 genes 0 gene
0 gene
17 species 0 species
UBERON:00004681700170
choroid plexus of fourth ventricle 1.0079.871 gene 0 gene
16 genes 1 species 0 species
UBERON:0002290101610
left testis 1.0090.131 gene 0 gene
16 genes 1 species 0 species
UBERON:0004533101610
brain 1.0087.2617 genes 0 gene
0 gene
17 species 0 species
UBERON:00009551700170
upper arm skin -1.0049.030 gene
1 gene 16 genes 0 species
1 species UBERON:0004263011601
colon 0.0052.484 genes 4 genes 9 genes 4 species 4 species UBERON:000115544944
iris -1.0043.540 gene
1 gene 16 genes 0 species
1 species UBERON:0001769011601
heart left ventricle, primary heart field 0.5074.693 genes 1 gene 13 genes 3 species 1 species UBERON:0002084, UBERON:0004140311331
olfactory bulb 0.3390.722 genes 1 gene 14 genes 2 species 1 species UBERON:0002264211421
trigeminal ganglion 0.0073.451 gene 1 gene 15 genes 1 species 1 species UBERON:0001675111511
tongue muscle -1.0012.560 gene
1 gene 16 genes 0 species
1 species UBERON:0000378011601
central nervous system 1.0093.4617 genes 0 gene
0 gene
17 species 0 species
UBERON:00010171700170
zygote 1.0067.531 gene 0 gene
16 genes 1 species 0 species
CL:0000365101610
skin epidermis -1.0041.760 gene
1 gene 16 genes 0 species
1 species UBERON:0001003011601
fibroblast -0.3351.941 gene 2 genes 14 genes 1 species 2 species CL:0000057121412
adenohypophysis 1.0078.712 genes 0 gene
15 genes 2 species 0 species
UBERON:0002196201520
alveolar ridge, cementum, dental follicle, periodontal ligament -1.0047.950 gene
1 gene 16 genes 0 species
1 species UBERON:0004103, UBERON:0001753, UBERON:0008969, UBERON:0008266011601
myocardium of ventricle -1.0042.680 gene
1 gene 16 genes 0 species
1 species UBERON:0001083011601
bronchial epithelial cell -1.0041.600 gene
1 gene 16 genes 0 species
1 species CL:0002328011601
amygdala 1.0066.162 genes 0 gene
15 genes 2 species 0 species
UBERON:0001876201520
camera-type eye 1.0053.074 genes 0 gene
13 genes 4 species 0 species
UBERON:0000019401340
mitral valve 1.0026.421 gene 0 gene
16 genes 1 species 0 species
UBERON:0002135101610
lip 1.0053.691 gene 0 gene
16 genes 1 species 0 species
UBERON:0001833101610
ileum 0.0041.062 genes 2 genes 13 genes 2 species 2 species UBERON:0002116221322
pylorus -1.0041.490 gene
1 gene 16 genes 0 species
1 species UBERON:0001166011601
skin of hip -1.0058.460 gene
1 gene 16 genes 0 species
1 species UBERON:0001554011601
olfactory epithelium -1.0043.850 gene
1 gene 16 genes 0 species
1 species UBERON:0001997011601
gonad 1.0073.0615 genes 0 gene
2 genes 15 species 0 species
UBERON:00009911502150
left ovary 1.0062.561 gene 0 gene
16 genes 1 species 0 species
UBERON:0002119101610
Ammon's horn 1.0064.924 genes 0 gene
13 genes 4 species 0 species
UBERON:0001954401340
ear 1.0067.792 genes 0 gene
15 genes 2 species 0 species
UBERON:0001690201520
cartilage tissue 0.0043.961 gene 1 gene 15 genes 1 species 1 species UBERON:0002418111511
right cardiac atrium 1.0049.142 genes 0 gene
15 genes 2 species 0 species
UBERON:0002078201520
urinary bladder vasculature -1.0059.990 gene
1 gene 16 genes 0 species
1 species UBERON:0012239011601
embryonic post-anal tail 0.0062.921 gene 1 gene 15 genes 1 species 1 species UBERON:0007144111511
epithelium of lens -1.0053.130 gene
1 gene 16 genes 0 species
1 species UBERON:0001803011601
seminiferous tubule of testis -1.0048.360 gene
1 gene 16 genes 0 species
1 species UBERON:0001343011601
thymus -0.2055.002 genes 3 genes 12 genes 2 species 3 species UBERON:0002370231223
internal carotid artery -1.0068.780 gene
1 gene 16 genes 0 species
1 species UBERON:0001532011601
motor neuron 1.0087.781 gene 0 gene
16 genes 1 species 0 species
CL:0000100101610
semi-lunar valve 1.0037.771 gene 0 gene
16 genes 1 species 0 species
UBERON:0005623101610
retina 1.0068.703 genes 0 gene
14 genes 3 species 0 species
UBERON:0000966301430
aorta -0.5041.771 gene 3 genes 13 genes 1 species 3 species UBERON:0000947131313
somite -1.0058.530 gene
1 gene 16 genes 0 species
1 species UBERON:0002329011601
tendon 1.0041.881 gene 0 gene
16 genes 1 species 0 species
UBERON:0000043101610
right kidney -1.0025.020 gene
1 gene 16 genes 0 species
1 species UBERON:0004539011601
optic fissure 1.0058.431 gene 0 gene
16 genes 1 species 0 species
UBERON:0005412101610
midbrain 1.0077.722 genes 0 gene
15 genes 2 species 0 species
UBERON:0001891201520
gingival epithelium -1.0042.370 gene
1 gene 16 genes 0 species
1 species UBERON:0001949011601
pineal body 1.0082.971 gene 0 gene
16 genes 1 species 0 species
UBERON:0001905101610
brainstem 1.0089.464 genes 0 gene
13 genes 4 species 0 species
UBERON:0002298401340
myocardium -1.0043.250 gene
1 gene 16 genes 0 species
1 species UBERON:0002349011601
cardiac ventricle 1.0053.033 genes 0 gene
14 genes 3 species 0 species
UBERON:0002082301430
esophagus -0.5060.561 gene 3 genes 13 genes 1 species 3 species UBERON:0001043131313
thyroid gland 0.0063.992 genes 2 genes 13 genes 2 species 2 species UBERON:0002046221322
manus 1.0060.181 gene 0 gene
16 genes 1 species 0 species
UBERON:0002398101610
epiblast (generic) 1.0070.501 gene 0 gene
16 genes 1 species 0 species
UBERON:0002532101610
male germ cell 1.0049.304 genes 0 gene
13 genes 4 species 0 species
CL:0000015401340
bone marrow -0.3349.762 genes 4 genes 11 genes 2 species 4 species UBERON:0002371241124
globus pallidus 0.0061.181 gene 1 gene 15 genes 1 species 1 species UBERON:0001875111511
spleen 0.3349.386 genes 3 genes 8 genes 6 species 3 species UBERON:000210663863
kidney epithelium 0.0048.461 gene 1 gene 15 genes 1 species 1 species UBERON:0004819111511
pancreas 1.0055.914 genes 0 gene
13 genes 4 species 0 species
UBERON:0001264401340
kidney 0.3350.048 genes 4 genes 5 genes 8 species 4 species UBERON:000211384584
heart right ventricle -1.0065.270 gene
3 genes 14 genes 0 species
3 species UBERON:0002080031403
blood -0.3346.332 genes 4 genes 11 genes 2 species 4 species UBERON:0000178241124
pleura -1.0049.010 gene
1 gene 16 genes 0 species
1 species UBERON:0000977011601
embryonic head 1.0047.732 genes 0 gene
15 genes 2 species 0 species
UBERON:0008816201520
female reproductive system 1.0041.516 genes 0 gene
11 genes 6 species 0 species
UBERON:0000474601160
cleaving embryo 1.0082.411 gene 0 gene
16 genes 1 species 0 species
UBERON:0007010101610
large intestine 0.6041.794 genes 1 gene 12 genes 4 species 1 species UBERON:0000059411241
adipose tissue 0.2046.343 genes 2 genes 12 genes 3 species 2 species UBERON:0001013321232
islet of Langerhans 1.0066.602 genes 0 gene
15 genes 2 species 0 species
UBERON:0000006201520
mesonephros 0.004.841 gene 1 gene 15 genes 1 species 1 species UBERON:0000080111511
epithelium of bronchus -1.0049.450 gene
2 genes 15 genes 0 species
2 species UBERON:0002031021502
right ovary 1.0066.181 gene 0 gene
16 genes 1 species 0 species
UBERON:0002118101610
duodenum 0.0053.212 genes 2 genes 13 genes 2 species 2 species UBERON:0002114221322
ventral horn of spinal cord 1.0087.311 gene 0 gene
16 genes 1 species 0 species
UBERON:0002257101610
choroid plexus epithelium 0.0078.331 gene 1 gene 15 genes 1 species 1 species UBERON:0003911111511
blood vessel 1.0066.652 genes 0 gene
15 genes 2 species 0 species
UBERON:0001981201520
pes 1.0072.171 gene 0 gene
16 genes 1 species 0 species
UBERON:0002387101610
1st arch mandibular component 1.0060.481 gene 0 gene
16 genes 1 species 0 species
UBERON:0007237101610
pericardium -1.0041.830 gene
1 gene 16 genes 0 species
1 species UBERON:0002407011601
ventricular zone 1.0065.542 genes 0 gene
15 genes 2 species 0 species
UBERON:0003053201520
pigmented layer of retina -1.0055.760 gene
2 genes 15 genes 0 species
2 species UBERON:0001782021502
oviduct epithelium 0.0047.281 gene 1 gene 15 genes 1 species 1 species UBERON:0004804111511
liver -0.1850.317 genes 10 genes 0 gene
7 species 10 species UBERON:00021077100710
endocardial cushion 1.0057.301 gene 0 gene
16 genes 1 species 0 species
UBERON:0002062101610
forebrain 1.0081.6214 genes 0 gene
3 genes 14 species 0 species
UBERON:00018901403140
skin of leg 1.0061.191 gene 0 gene
16 genes 1 species 0 species
UBERON:0001511101610
collection of basal ganglia 1.0072.212 genes 0 gene
15 genes 2 species 0 species
UBERON:0010011201520
muscle organ 1.0048.407 genes 0 gene
10 genes 7 species 0 species
UBERON:0001630701070
caecum 0.0041.141 gene 1 gene 15 genes 1 species 1 species UBERON:0001153111511
striatum 1.0062.602 genes 0 gene
15 genes 2 species 0 species
UBERON:0002435201520
cardiac atrium 0.0042.712 genes 2 genes 13 genes 2 species 2 species UBERON:0002081221322
diencephalon 1.0078.935 genes 0 gene
12 genes 5 species 0 species
UBERON:0001894501250
head 1.0080.997 genes 0 gene
10 genes 7 species 0 species
UBERON:0000033701070
fundus of stomach 1.0054.781 gene 0 gene
16 genes 1 species 0 species
UBERON:0001160101610
small intestine 0.5061.563 genes 1 gene 13 genes 3 species 1 species UBERON:0002108311331
cerebellar cortex 1.0099.614 genes 0 gene
13 genes 4 species 0 species
UBERON:0002129401340
peritoneum 1.0041.411 gene 0 gene
16 genes 1 species 0 species
UBERON:0002358101610
utricle of membranous labyrinth 1.0049.581 gene 0 gene
16 genes 1 species 0 species
UBERON:0001853101610
skin of external ear -1.0038.230 gene
1 gene 16 genes 0 species
1 species UBERON:0001459011601
heart 0.4363.5410 genes 4 genes 3 genes 10 species 4 species UBERON:00009481043104
renal corpuscle -1.0046.890 gene
1 gene 16 genes 0 species
1 species UBERON:0001229011601
lung -0.4047.293 genes 7 genes 7 genes 3 species 7 species UBERON:000204837737
cerebral hemisphere 1.0085.5314 genes 0 gene
3 genes 14 species 0 species
UBERON:00018691403140
gall bladder 0.0081.451 gene 1 gene 15 genes 1 species 1 species UBERON:0002110111511
female gonad 0.0073.055 genes 5 genes 7 genes 5 species 5 species UBERON:000099255755
inferior vagus X ganglion 1.0056.671 gene 0 gene
16 genes 1 species 0 species
UBERON:0005363101610
atrioventricular valve 0.0055.151 gene 1 gene 15 genes 1 species 1 species UBERON:0002133111511
upper leg skin -1.0035.240 gene
1 gene 16 genes 0 species
1 species UBERON:0004262011601
ciliary body 1.0071.331 gene 0 gene
16 genes 1 species 0 species
UBERON:0001775101610
neurohypophysis 1.0062.772 genes 0 gene
15 genes 2 species 0 species
UBERON:0002198201520
intestine 1.0053.554 genes 0 gene
13 genes 4 species 0 species
UBERON:0000160401340
aortic valve 1.0046.261 gene 0 gene
16 genes 1 species 0 species
UBERON:0002137101610
embryo 0.7565.317 genes 1 gene 9 genes 7 species 1 species UBERON:000092271971
outflow tract 1.0060.942 genes 0 gene
15 genes 2 species 0 species
UBERON:0004145201520
choroid plexus 0.0065.081 gene 1 gene 15 genes 1 species 1 species UBERON:0001886111511
dermis -1.0038.570 gene
1 gene 16 genes 0 species
1 species UBERON:0002067011601
presomitic mesoderm 1.0065.591 gene 0 gene
16 genes 1 species 0 species
UBERON:0003059101610
smooth muscle tissue -0.3368.431 gene 2 genes 14 genes 1 species 2 species UBERON:0001135121412
gastrula 1.0091.492 genes 0 gene
15 genes 2 species 0 species
UBERON:0004734201520
medulla oblongata 1.0089.912 genes 0 gene
15 genes 2 species 0 species
UBERON:0001896201520
adrenal gland 0.3361.034 genes 2 genes 11 genes 4 species 2 species UBERON:0002369421142
caudate nucleus 1.0070.621 gene 0 gene
16 genes 1 species 0 species
UBERON:0001873101610
dorsal root ganglion 1.0062.812 genes 0 gene
15 genes 2 species 0 species
UBERON:0000044201520
cerebellum 1.0099.5312 genes 0 gene
5 genes 12 species 0 species
UBERON:00020371205120
trachea -1.0051.010 gene
3 genes 14 genes 0 species
3 species UBERON:0003126031403
bone element 1.0059.292 genes 0 gene
15 genes 2 species 0 species
UBERON:0001474201520
blastopore, primitive streak 1.0060.681 gene 0 gene
16 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101610
1st arch maxillary component 1.0060.501 gene 0 gene
16 genes 1 species 0 species
UBERON:0007238101610
gingiva -1.0039.270 gene
1 gene 16 genes 0 species
1 species UBERON:0001828011601
vertebral column -1.0046.040 gene
1 gene 16 genes 0 species
1 species UBERON:0001130011601
brain blood vessel 1.0052.431 gene 0 gene
16 genes 1 species 0 species
UBERON:0003499101610
cochlea 1.0077.241 gene 0 gene
16 genes 1 species 0 species
UBERON:0001844101610
bronchus -1.0041.230 gene
1 gene 16 genes 0 species
1 species UBERON:0002185011601
blastula 0.3319.932 genes 1 gene 14 genes 2 species 1 species UBERON:0000307211421
cornea 1.0083.221 gene 0 gene
16 genes 1 species 0 species
UBERON:0000964101610
epithelial cell of pancreas -1.0050.540 gene
1 gene 16 genes 0 species
1 species CL:0000083011601
autopod skin 1.0029.551 gene 0 gene
16 genes 1 species 0 species
UBERON:0015790101610
inferior olivary complex -1.0046.120 gene
1 gene 16 genes 0 species
1 species UBERON:0002127011601
mammillary body 1.0091.041 gene 0 gene
16 genes 1 species 0 species
UBERON:0002206101610
adrenal cortex 1.0041.812 genes 0 gene
15 genes 2 species 0 species
UBERON:0001235201520
epithelium of small intestine -1.0039.860 gene
1 gene 16 genes 0 species
1 species UBERON:0001902011601
hindbrain 1.0084.3112 genes 0 gene
5 genes 12 species 0 species
UBERON:00020281205120
right testis 1.0089.251 gene 0 gene
16 genes 1 species 0 species
UBERON:0004534101610
laryngeal cartilage -1.0013.830 gene
1 gene 16 genes 0 species
1 species UBERON:0001739011601
sciatic nerve 0.0056.081 gene 1 gene 15 genes 1 species 1 species UBERON:0001322111511
retinal neural layer 1.0074.821 gene 0 gene
16 genes 1 species 0 species
UBERON:0003902101610
tongue -1.0041.280 gene
3 genes 14 genes 0 species
3 species UBERON:0001723031403
hypothalamus 1.0090.265 genes 0 gene
12 genes 5 species 0 species
UBERON:0001898501250
saccule of membranous labyrinth 1.0088.651 gene 0 gene
16 genes 1 species 0 species
UBERON:0001854101610
sternocleidomastoid -1.0066.690 gene
1 gene 16 genes 0 species
1 species UBERON:0001128011601
synovial membrane of synovial joint -1.0021.090 gene
1 gene 16 genes 0 species
1 species UBERON:0002018011601
ear vesicle 1.0087.191 gene 0 gene
16 genes 1 species 0 species
UBERON:0003051101610
intestinal epithelium -1.0041.670 gene
1 gene 16 genes 0 species
1 species UBERON:0001277011601
limb 1.0059.216 genes 0 gene
11 genes 6 species 0 species
UBERON:0002101601160
meninx 1.0068.411 gene 0 gene
16 genes 1 species 0 species
UBERON:0002360101610
ileal epithelium -1.0061.840 gene
1 gene 16 genes 0 species
1 species UBERON:0008345011601
stomach 0.5048.983 genes 1 gene 13 genes 3 species 1 species UBERON:0000945311331
epithelium of esophagus -1.0050.040 gene
1 gene 16 genes 0 species
1 species UBERON:0001976011601
testis 0.7595.2914 genes 2 genes 1 gene 14 species 2 species UBERON:00004731421142
skeletal muscle tissue -0.2753.054 genes 7 genes 6 genes 4 species 7 species UBERON:000113447647
male reproductive system 1.0095.0814 genes 0 gene
3 genes 14 species 0 species
UBERON:00000791403140
vault of skull -1.0041.000 gene
1 gene 16 genes 0 species
1 species UBERON:0004339011601
eyeball of camera-type eye 1.0050.784 genes 0 gene
13 genes 4 species 0 species
UBERON:0010230401340
neural tube 1.0077.852 genes 0 gene
15 genes 2 species 0 species
UBERON:0001049201520
otic placode 1.0086.641 gene 0 gene
16 genes 1 species 0 species
UBERON:0003069101610
left cardiac atrium 1.0075.011 gene 0 gene
16 genes 1 species 0 species
UBERON:0002079101610
telencephalon 1.0084.8214 genes 0 gene
3 genes 14 species 0 species
UBERON:00018931403140
putamen 1.0068.491 gene 0 gene
16 genes 1 species 0 species
UBERON:0001874101610
extra-ocular muscle -1.0062.740 gene
1 gene 16 genes 0 species
1 species UBERON:0001601011601
cranial nerve II -1.0055.230 gene
2 genes 15 genes 0 species
2 species UBERON:0000941021502
pituitary gland 0.6779.675 genes 1 gene 11 genes 5 species 1 species UBERON:0000007511151
urinary bladder 0.5055.903 genes 1 gene 13 genes 3 species 1 species UBERON:0001255311331

Do not show this banner again