We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 17 genes 0 species
1 species UBERON:0002206011701
forelimb mesenchyme, mesenchyme pectoral fin 1.0068.751 gene 0 gene
17 genes 1 species 0 species
UBERON:0003859, UBERON:0003934101710
chordate pharynx 1.0054.242 genes 0 gene
16 genes 2 species 0 species
UBERON:0001042201620
optic fissure -1.0040.620 gene
1 gene 17 genes 0 species
1 species UBERON:0005412011701
postcranial axial skeleton 1.0068.721 gene 0 gene
17 genes 1 species 0 species
UBERON:0002090101710
epithelial cell of pancreas 1.0067.731 gene 0 gene
17 genes 1 species 0 species
CL:0000083101710
semi-lunar valve 1.0055.971 gene 0 gene
17 genes 1 species 0 species
UBERON:0005623101710
inferior olivary complex 1.0048.341 gene 0 gene
17 genes 1 species 0 species
UBERON:0002127101710
brain blood vessel 1.0046.101 gene 0 gene
17 genes 1 species 0 species
UBERON:0003499101710
hindlimb, pelvic fin 1.0061.646 genes 0 gene
12 genes 6 species 0 species
UBERON:0002103, UBERON:0000152601260
hypothalamus 0.0047.083 genes 3 genes 12 genes 3 species 3 species UBERON:0001898331233
gingival epithelium -1.0067.870 gene
1 gene 17 genes 0 species
1 species UBERON:0001949011701
gastrula -0.3341.441 gene 2 genes 15 genes 1 species 2 species UBERON:0004734121512
otic placode -1.0047.580 gene
1 gene 17 genes 0 species
1 species UBERON:0003069011701
cleaving embryo 1.0059.281 gene 0 gene
17 genes 1 species 0 species
UBERON:0007010101710
midbrain 1.0073.172 genes 0 gene
16 genes 2 species 0 species
UBERON:0001891201620
retinal neural layer -1.0045.120 gene
1 gene 17 genes 0 species
1 species UBERON:0003902011701
cornea 1.0044.701 gene 0 gene
17 genes 1 species 0 species
UBERON:0000964101710
hindbrain 1.0061.524 genes 0 gene
14 genes 4 species 0 species
UBERON:0002028401440
cranial nerve II -1.0052.390 gene
2 genes 16 genes 0 species
2 species UBERON:0000941021602
stomach 0.2051.203 genes 2 genes 13 genes 3 species 2 species UBERON:0000945321332
pituitary gland -0.1455.943 genes 4 genes 11 genes 3 species 4 species UBERON:0000007341134
inferior vagus X ganglion 1.0073.311 gene 0 gene
17 genes 1 species 0 species
UBERON:0005363101710
female reproductive system 1.0073.809 genes 0 gene
9 genes 9 species 0 species
UBERON:000047490990
epithelium of esophagus 1.0074.311 gene 0 gene
17 genes 1 species 0 species
UBERON:0001976101710
pancreas 0.5056.863 genes 1 gene 14 genes 3 species 1 species UBERON:0001264311431
kidney epithelium 0.0049.561 gene 1 gene 16 genes 1 species 1 species UBERON:0004819111611
upper leg skin -1.0054.170 gene
1 gene 17 genes 0 species
1 species UBERON:0004262011701
extra-ocular muscle 1.0056.281 gene 0 gene
17 genes 1 species 0 species
UBERON:0001601101710
limb, paired fin 1.0086.926 genes 0 gene
12 genes 6 species 0 species
UBERON:0002101, UBERON:0002534601260
manus, pectoral fin radial bone 1.0089.501 gene 0 gene
17 genes 1 species 0 species
UBERON:0002398, UBERON:2001586101710
putamen 1.0056.541 gene 0 gene
17 genes 1 species 0 species
UBERON:0001874101710
telencephalon 1.0047.3814 genes 0 gene
4 genes 14 species 0 species
UBERON:00018931404140
utricle of membranous labyrinth -1.0038.440 gene
1 gene 17 genes 0 species
1 species UBERON:0001853011701
eyeball of camera-type eye 1.0038.603 genes 0 gene
15 genes 3 species 0 species
UBERON:0010230301530
right ovary -1.0040.720 gene
1 gene 17 genes 0 species
1 species UBERON:0002118011701
testis -0.2249.137 genes 11 genes 0 gene
7 species 11 species UBERON:00004737110711
male reproductive system 1.0042.139 genes 0 gene
9 genes 9 species 0 species
UBERON:000007990990
autopod skin -1.007.220 gene
1 gene 17 genes 0 species
1 species UBERON:0015790011701
jaw skeleton 1.0059.082 genes 0 gene
16 genes 2 species 0 species
UBERON:0001708201620
multi-cellular organism 1.0049.5418 genes 0 gene
0 gene
18 species 0 species
UBERON:00004681800180
ventricular zone 0.0053.491 gene 1 gene 16 genes 1 species 1 species UBERON:0003053111611
skin epidermis -1.0040.780 gene
1 gene 17 genes 0 species
1 species UBERON:0001003011701
embryonic post-anal tail -1.0018.060 gene
2 genes 16 genes 0 species
2 species UBERON:0007144021602
central nervous system 1.0048.3815 genes 0 gene
3 genes 15 species 0 species
UBERON:00010171503150
fibroblast 0.3352.672 genes 1 gene 15 genes 2 species 1 species CL:0000057211521
mesonephros -1.004.840 gene
1 gene 17 genes 0 species
1 species UBERON:0000080011701
iris -1.0038.860 gene
1 gene 17 genes 0 species
1 species UBERON:0001769011701
head 1.0053.378 genes 0 gene
10 genes 8 species 0 species
UBERON:0000033801080
choroid plexus epithelium 1.0067.512 genes 0 gene
16 genes 2 species 0 species
UBERON:0003911201620
tongue muscle 1.0041.571 gene 0 gene
17 genes 1 species 0 species
UBERON:0000378101710
trigeminal ganglion 0.0072.621 gene 1 gene 16 genes 1 species 1 species UBERON:0001675111611
forebrain 1.0049.3814 genes 0 gene
4 genes 14 species 0 species
UBERON:00018901404140
vertebral column 0.0046.041 gene 1 gene 16 genes 1 species 1 species UBERON:0001130111611
caecum -0.3373.971 gene 2 genes 15 genes 1 species 2 species UBERON:0001153121512
heart left ventricle, primary heart field 0.2046.343 genes 2 genes 13 genes 3 species 2 species UBERON:0002084, UBERON:0004140321332
olfactory bulb 0.3363.132 genes 1 gene 15 genes 2 species 1 species UBERON:0002264211521
lens of camera-type eye 1.0048.131 gene 0 gene
17 genes 1 species 0 species
UBERON:0000965101710
ear 1.0067.892 genes 0 gene
16 genes 2 species 0 species
UBERON:0001690201620
brain 0.6757.3715 genes 3 genes 0 gene
15 species 3 species UBERON:00009551530153
male germ cell 1.0049.303 genes 0 gene
15 genes 3 species 0 species
CL:0000015301530
upper arm skin -1.0049.030 gene
1 gene 17 genes 0 species
1 species UBERON:0004263011701
smooth muscle tissue -0.3360.021 gene 2 genes 15 genes 1 species 2 species UBERON:0001135121512
heart right ventricle -0.3368.831 gene 2 genes 15 genes 1 species 2 species UBERON:0002080121512
lip 1.0053.531 gene 0 gene
17 genes 1 species 0 species
UBERON:0001833101710
skin of hip -1.0047.050 gene
1 gene 17 genes 0 species
1 species UBERON:0001554011701
female gonad 0.0057.446 genes 6 genes 6 genes 6 species 6 species UBERON:000099266666
internal ear 1.0067.451 gene 0 gene
17 genes 1 species 0 species
UBERON:0001846101710
ileum -0.2063.792 genes 3 genes 13 genes 2 species 3 species UBERON:0002116231323
mitral valve 1.0036.901 gene 0 gene
17 genes 1 species 0 species
UBERON:0002135101710
cartilage tissue 1.0077.514 genes 0 gene
14 genes 4 species 0 species
UBERON:0002418401440
blastopore, primitive streak -1.0040.630 gene
1 gene 17 genes 0 species
1 species UBERON:0000100, UBERON:0004341011701
thyroid gland 0.0050.592 genes 2 genes 14 genes 2 species 2 species UBERON:0002046221422
adenohypophysis 0.0059.551 gene 1 gene 16 genes 1 species 1 species UBERON:0002196111611
choroid plexus of fourth ventricle -1.0057.090 gene
1 gene 17 genes 0 species
1 species UBERON:0002290011701
larva 1.0034.001 gene 0 gene
17 genes 1 species 0 species
UBERON:0002548101710
bone element 1.0051.405 genes 0 gene
13 genes 5 species 0 species
UBERON:0001474501350
cerebellum -0.3859.484 genes 9 genes 5 genes 4 species 9 species UBERON:000203749549
fundus of stomach -1.0048.150 gene
1 gene 17 genes 0 species
1 species UBERON:0001160011701
pineal body -1.0040.470 gene
1 gene 17 genes 0 species
1 species UBERON:0001905011701
dermis -1.0052.130 gene
1 gene 17 genes 0 species
1 species UBERON:0002067011701
cardiac ventricle 1.0074.914 genes 0 gene
14 genes 4 species 0 species
UBERON:0002082401440
outflow tract 0.0037.721 gene 1 gene 16 genes 1 species 1 species UBERON:0004145111611
saccule of membranous labyrinth -1.0047.220 gene
1 gene 17 genes 0 species
1 species UBERON:0001854011701
caudal tuberculum, substantia nigra 1.0048.652 genes 0 gene
16 genes 2 species 0 species
UBERON:2000633, UBERON:0002038201620
camera-type eye 1.0040.143 genes 0 gene
15 genes 3 species 0 species
UBERON:0000019301530
choroid plexus 0.3323.422 genes 1 gene 15 genes 2 species 1 species UBERON:0001886211521
tarsal skeleton 1.0054.541 gene 0 gene
17 genes 1 species 0 species
UBERON:0009879101710
thymus -0.2062.812 genes 3 genes 13 genes 2 species 3 species UBERON:0002370231323
forelimb, pectoral fin 1.0077.772 genes 0 gene
16 genes 2 species 0 species
UBERON:0002102, UBERON:0000151201620
tendon 1.0066.741 gene 0 gene
17 genes 1 species 0 species
UBERON:0000043101710
motor neuron -1.0042.030 gene
1 gene 17 genes 0 species
1 species CL:0000100011701
epithelium of lens -1.0039.680 gene
1 gene 17 genes 0 species
1 species UBERON:0001803011701
right cardiac atrium 0.0024.391 gene 1 gene 16 genes 1 species 1 species UBERON:0002078111611
internal carotid artery -1.0057.650 gene
1 gene 17 genes 0 species
1 species UBERON:0001532011701
1st arch mandibular component 1.0057.001 gene 0 gene
17 genes 1 species 0 species
UBERON:0007237101710
endocardial endothelium -1.0021.940 gene
1 gene 17 genes 0 species
1 species UBERON:0005316011701
Ammon's horn 0.6049.524 genes 1 gene 13 genes 4 species 1 species UBERON:0001954411341
epiblast (generic) 1.0033.451 gene 0 gene
17 genes 1 species 0 species
UBERON:0002532101710
adrenal cortex 0.0073.161 gene 1 gene 16 genes 1 species 1 species UBERON:0001235111611
sternocleidomastoid -1.0037.000 gene
1 gene 17 genes 0 species
1 species UBERON:0001128011701
brainstem -0.5040.361 gene 3 genes 14 genes 1 species 3 species UBERON:0002298131413
aorta 1.0073.244 genes 0 gene
14 genes 4 species 0 species
UBERON:0000947401440
right kidney 1.0055.381 gene 0 gene
17 genes 1 species 0 species
UBERON:0004539101710
retina -0.2046.892 genes 3 genes 13 genes 2 species 3 species UBERON:0000966231323
somite -1.0041.230 gene
1 gene 17 genes 0 species
1 species UBERON:0002329011701
intestine 0.6053.124 genes 1 gene 13 genes 4 species 1 species UBERON:0000160411341
esophagus 0.5055.073 genes 1 gene 14 genes 3 species 1 species UBERON:0001043311431
hindlimb mesenchyme, mesenchyme pelvic fin 1.0049.991 gene 0 gene
17 genes 1 species 0 species
UBERON:0003860, UBERON:0003935101710
myocardium 1.0075.561 gene 0 gene
17 genes 1 species 0 species
UBERON:0002349101710
blastula 0.3348.722 genes 1 gene 15 genes 2 species 1 species UBERON:0000307211521
right testis 1.0043.361 gene 0 gene
17 genes 1 species 0 species
UBERON:0004534101710
blood -0.4343.012 genes 5 genes 11 genes 2 species 5 species UBERON:0000178251125
adipose tissue 1.0066.966 genes 0 gene
12 genes 6 species 0 species
UBERON:0001013601260
kidney blood vessel -1.0063.320 gene
1 gene 17 genes 0 species
1 species UBERON:0003517011701
embryonic head 0.3323.422 genes 1 gene 15 genes 2 species 1 species UBERON:0008816211521
skeletal muscle tissue -0.3360.874 genes 8 genes 6 genes 4 species 8 species UBERON:000113448648
spleen -0.4543.143 genes 8 genes 7 genes 3 species 8 species UBERON:000210638738
kidney 0.3858.349 genes 4 genes 5 genes 9 species 4 species UBERON:000211394594
intestinal epithelium -1.0041.670 gene
1 gene 17 genes 0 species
1 species UBERON:0001277011701
pericardium 1.0077.632 genes 0 gene
16 genes 2 species 0 species
UBERON:0002407201620
Meckel's cartilage 1.0057.701 gene 0 gene
17 genes 1 species 0 species
UBERON:0003107101710
lung, swim bladder 0.1760.817 genes 5 genes 6 genes 7 species 5 species UBERON:0002048, UBERON:000686075675
cardiac atrium 0.0073.562 genes 2 genes 14 genes 2 species 2 species UBERON:0002081221422
ventral horn of spinal cord 1.0040.091 gene 0 gene
17 genes 1 species 0 species
UBERON:0002257101710
islet of Langerhans -1.0039.040 gene
2 genes 16 genes 0 species
2 species UBERON:0000006021602
neural tube 1.0058.822 genes 0 gene
16 genes 2 species 0 species
UBERON:0001049201620
pleura 1.0052.711 gene 0 gene
17 genes 1 species 0 species
UBERON:0000977101710
endocardial cushion -1.0039.650 gene
1 gene 17 genes 0 species
1 species UBERON:0002062011701
notochord -1.0057.670 gene
1 gene 17 genes 0 species
1 species UBERON:0002328011701
cerebral hemisphere 1.0038.9314 genes 0 gene
4 genes 14 species 0 species
UBERON:00018691404140
skeletal joint 1.0066.674 genes 0 gene
14 genes 4 species 0 species
UBERON:0000982401440
pigmented layer of retina 0.0065.191 gene 1 gene 16 genes 1 species 1 species UBERON:0001782111611
1st arch maxillary component 1.0056.661 gene 0 gene
17 genes 1 species 0 species
UBERON:0007238101710
skeleton 1.0059.973 genes 0 gene
15 genes 3 species 0 species
UBERON:0004288301530
cerebellar cortex 0.0038.642 genes 2 genes 14 genes 2 species 2 species UBERON:0002129221422
heart 0.1349.089 genes 7 genes 2 genes 9 species 7 species UBERON:000094897297
liver -0.5648.614 genes 14 genes 0 gene
4 species 14 species UBERON:00021074140414
ileal epithelium -1.0054.380 gene
1 gene 17 genes 0 species
1 species UBERON:0008345011701
colon -0.1151.724 genes 5 genes 9 genes 4 species 5 species UBERON:000115545945
left testis 1.0044.401 gene 0 gene
17 genes 1 species 0 species
UBERON:0004533101710
muscle organ 0.7566.897 genes 1 gene 10 genes 7 species 1 species UBERON:0001630711071
striatum 0.0039.131 gene 1 gene 16 genes 1 species 1 species UBERON:0002435111611
myocardium of ventricle -1.0039.700 gene
1 gene 17 genes 0 species
1 species UBERON:0001083011701
neurohypophysis -1.0024.470 gene
1 gene 17 genes 0 species
1 species UBERON:0002198011701
presomitic mesoderm -1.0044.380 gene
1 gene 17 genes 0 species
1 species UBERON:0003059011701
olfactory epithelium 1.0055.901 gene 0 gene
17 genes 1 species 0 species
UBERON:0001997101710
dorsal root ganglion 1.0072.652 genes 0 gene
16 genes 2 species 0 species
UBERON:0000044201620
aortic valve -1.0042.310 gene
1 gene 17 genes 0 species
1 species UBERON:0002137011701
ciliary body -1.0037.490 gene
1 gene 17 genes 0 species
1 species UBERON:0001775011701
ear vesicle -1.0045.560 gene
1 gene 17 genes 0 species
1 species UBERON:0003051011701
gall bladder 0.0057.411 gene 1 gene 16 genes 1 species 1 species UBERON:0002110111611
atrioventricular valve 0.0039.641 gene 1 gene 16 genes 1 species 1 species UBERON:0002133111611
parathyroid gland, pharyngeal gill -1.0016.760 gene
1 gene 17 genes 0 species
1 species UBERON:0001132, UBERON:0000206011701
gingiva 1.0072.181 gene 0 gene
17 genes 1 species 0 species
UBERON:0001828101710
peritoneum 1.0073.261 gene 0 gene
17 genes 1 species 0 species
UBERON:0002358101710
zygote -1.0020.880 gene
1 gene 17 genes 0 species
1 species CL:0000365011701
medulla oblongata -0.3372.611 gene 2 genes 15 genes 1 species 2 species UBERON:0001896121512
pylorus 1.0072.941 gene 0 gene
17 genes 1 species 0 species
UBERON:0001166101710
caudate nucleus 1.0050.481 gene 0 gene
17 genes 1 species 0 species
UBERON:0001873101710
embryo 0.8054.309 genes 1 gene 8 genes 9 species 1 species UBERON:000092291891
left ovary -1.0038.200 gene
1 gene 17 genes 0 species
1 species UBERON:0002119011701

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