We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 20 genes 0 species
1 species UBERON:0002206012001
optic fissure -1.0040.620 gene
1 gene 20 genes 0 species
1 species UBERON:0005412012001
epithelial cell of pancreas -1.0053.760 gene
1 gene 20 genes 0 species
1 species CL:0000083012001
semi-lunar valve -1.0050.710 gene
1 gene 20 genes 0 species
1 species UBERON:0005623012001
cleithrum 1.0071.861 gene 0 gene
20 genes 1 species 0 species
UBERON:0004741102010
inferior olivary complex -1.0055.290 gene
1 gene 20 genes 0 species
1 species UBERON:0002127012001
brain blood vessel -1.0039.180 gene
1 gene 20 genes 0 species
1 species UBERON:0003499012001
hypothalamus -0.3341.932 genes 4 genes 15 genes 2 species 4 species UBERON:0001898241524
gingival epithelium -1.0042.370 gene
1 gene 20 genes 0 species
1 species UBERON:0001949012001
gastrula 0.3366.872 genes 1 gene 18 genes 2 species 1 species UBERON:0004734211821
otic placode -1.0047.580 gene
1 gene 20 genes 0 species
1 species UBERON:0003069012001
cleaving embryo -1.0047.050 gene
1 gene 20 genes 0 species
1 species UBERON:0007010012001
midbrain 0.0043.631 gene 1 gene 19 genes 1 species 1 species UBERON:0001891111911
retinal neural layer 1.0030.491 gene 0 gene
20 genes 1 species 0 species
UBERON:0003902102010
cornea -1.0039.620 gene
1 gene 20 genes 0 species
1 species UBERON:0000964012001
hindbrain 1.0035.824 genes 0 gene
17 genes 4 species 0 species
UBERON:0002028401740
cranial nerve II -1.0052.270 gene
2 genes 19 genes 0 species
2 species UBERON:0000941021902
stomach 0.2047.823 genes 2 genes 16 genes 3 species 2 species UBERON:0000945321632
pituitary gland -0.7137.371 gene 6 genes 14 genes 1 species 6 species UBERON:0000007161416
inferior vagus X ganglion -1.0044.200 gene
1 gene 20 genes 0 species
1 species UBERON:0005363012001
female reproductive system 1.0041.516 genes 0 gene
15 genes 6 species 0 species
UBERON:0000474601560
epithelium of esophagus -1.0050.040 gene
1 gene 20 genes 0 species
1 species UBERON:0001976012001
pancreas 1.0042.184 genes 0 gene
17 genes 4 species 0 species
UBERON:0001264401740
kidney epithelium 1.0048.462 genes 0 gene
19 genes 2 species 0 species
UBERON:0004819201920
upper leg skin -1.0042.460 gene
1 gene 20 genes 0 species
1 species UBERON:0004262012001
extra-ocular muscle -1.0036.170 gene
1 gene 20 genes 0 species
1 species UBERON:0001601012001
limb, paired fin 1.0032.335 genes 0 gene
16 genes 5 species 0 species
UBERON:0002101, UBERON:0002534501650
manus, pectoral fin radial bone -1.0040.660 gene
1 gene 20 genes 0 species
1 species UBERON:0002398, UBERON:2001586012001
putamen 1.0027.481 gene 0 gene
20 genes 1 species 0 species
UBERON:0001874102010
telencephalon 1.0047.388 genes 0 gene
13 genes 8 species 0 species
UBERON:0001893801380
utricle of membranous labyrinth -1.0038.440 gene
1 gene 20 genes 0 species
1 species UBERON:0001853012001
eyeball of camera-type eye 0.0038.601 gene 1 gene 19 genes 1 species 1 species UBERON:0010230111911
right ovary -1.0033.760 gene
1 gene 20 genes 0 species
1 species UBERON:0002118012001
testis -0.5042.415 genes 15 genes 1 gene 5 species 15 species UBERON:00004735151515
male reproductive system 1.0034.075 genes 0 gene
16 genes 5 species 0 species
UBERON:0000079501650
autopod skin -1.0021.530 gene
1 gene 20 genes 0 species
1 species UBERON:0015790012001
multi-cellular organism 1.0097.5621 genes 0 gene
0 gene
21 species 0 species
UBERON:00004682100210
ventricular zone -1.0027.720 gene
2 genes 19 genes 0 species
2 species UBERON:0003053021902
skin epidermis -1.0038.630 gene
1 gene 20 genes 0 species
1 species UBERON:0001003012001
embryonic post-anal tail -1.0018.060 gene
2 genes 19 genes 0 species
2 species UBERON:0007144021902
central nervous system 1.0051.0511 genes 0 gene
10 genes 11 species 0 species
UBERON:000101711010110
fibroblast -1.0031.010 gene
4 genes 17 genes 0 species
4 species CL:0000057041704
mesonephros 1.0053.062 genes 0 gene
19 genes 2 species 0 species
UBERON:0000080201920
iris -1.0038.860 gene
1 gene 20 genes 0 species
1 species UBERON:0001769012001
head 1.0049.886 genes 0 gene
15 genes 6 species 0 species
UBERON:0000033601560
choroid plexus epithelium -1.0049.750 gene
2 genes 19 genes 0 species
2 species UBERON:0003911021902
tongue muscle -1.0012.560 gene
1 gene 20 genes 0 species
1 species UBERON:0000378012001
trigeminal ganglion -1.0043.520 gene
2 genes 19 genes 0 species
2 species UBERON:0001675021902
forebrain 1.0042.628 genes 0 gene
13 genes 8 species 0 species
UBERON:0001890801380
vertebral column -1.0046.040 gene
1 gene 20 genes 0 species
1 species UBERON:0001130012001
caecum -1.0048.840 gene
3 genes 18 genes 0 species
3 species UBERON:0001153031803
chondrocranium 1.0081.251 gene 0 gene
20 genes 1 species 0 species
UBERON:0002241102010
olfactory bulb -0.3362.651 gene 2 genes 18 genes 1 species 2 species UBERON:0002264121812
heart left ventricle, primary heart field -1.0046.180 gene
5 genes 16 genes 0 species
5 species UBERON:0002084, UBERON:0004140051605
lens of camera-type eye 1.0043.661 gene 0 gene
20 genes 1 species 0 species
UBERON:0000965102010
ear -1.0045.400 gene
1 gene 20 genes 0 species
1 species UBERON:0001690012001
brain 0.1641.6411 genes 8 genes 2 genes 11 species 8 species UBERON:00009551182118
male germ cell 1.0049.302 genes 0 gene
19 genes 2 species 0 species
CL:0000015201920
smooth muscle tissue -0.3330.881 gene 2 genes 18 genes 1 species 2 species UBERON:0001135121812
upper arm skin -1.0049.030 gene
1 gene 20 genes 0 species
1 species UBERON:0004263012001
heart right ventricle -1.0052.450 gene
3 genes 18 genes 0 species
3 species UBERON:0002080031803
lip 1.0039.471 gene 0 gene
20 genes 1 species 0 species
UBERON:0001833102010
skin of hip -1.0035.460 gene
1 gene 20 genes 0 species
1 species UBERON:0001554012001
female gonad -0.4342.874 genes 10 genes 7 genes 4 species 10 species UBERON:00009924107410
ileum 0.2072.563 genes 2 genes 16 genes 3 species 2 species UBERON:0002116321632
mitral valve -1.0011.490 gene
1 gene 20 genes 0 species
1 species UBERON:0002135012001
cartilage tissue -1.0043.960 gene
2 genes 19 genes 0 species
2 species UBERON:0002418021902
blastopore, primitive streak -1.0040.630 gene
1 gene 20 genes 0 species
1 species UBERON:0000100, UBERON:0004341012001
thyroid gland -1.0028.890 gene
4 genes 17 genes 0 species
4 species UBERON:0002046041704
adenohypophysis -1.0028.010 gene
2 genes 19 genes 0 species
2 species UBERON:0002196021902
larva 1.0084.211 gene 0 gene
20 genes 1 species 0 species
UBERON:0002548102010
bone element 1.0041.612 genes 0 gene
19 genes 2 species 0 species
UBERON:0001474201920
cerebellum -0.4746.524 genes 11 genes 6 genes 4 species 11 species UBERON:00020374116411
fundus of stomach 1.0040.271 gene 0 gene
20 genes 1 species 0 species
UBERON:0001160102010
pineal body -1.0040.470 gene
1 gene 20 genes 0 species
1 species UBERON:0001905012001
dermis -1.0038.570 gene
1 gene 20 genes 0 species
1 species UBERON:0002067012001
cardiac ventricle -1.0053.040 gene
2 genes 19 genes 0 species
2 species UBERON:0002082021902
outflow tract -1.0043.640 gene
1 gene 20 genes 0 species
1 species UBERON:0004145012001
saccule of membranous labyrinth -1.0047.220 gene
1 gene 20 genes 0 species
1 species UBERON:0001854012001
caudal tuberculum, substantia nigra -1.0040.070 gene
2 genes 19 genes 0 species
2 species UBERON:2000633, UBERON:0002038021902
camera-type eye 1.0040.142 genes 0 gene
19 genes 2 species 0 species
UBERON:0000019201920
choroid plexus -1.0023.420 gene
1 gene 20 genes 0 species
1 species UBERON:0001886012001
thymus -0.6051.381 gene 4 genes 16 genes 1 species 4 species UBERON:0002370141614
tendon -1.0054.680 gene
1 gene 20 genes 0 species
1 species UBERON:0000043012001
digestive tract 1.0072.427 genes 0 gene
14 genes 7 species 0 species
UBERON:0001555701470
motor neuron -1.0042.030 gene
1 gene 20 genes 0 species
1 species CL:0000100012001
epithelium of lens -1.0039.680 gene
1 gene 20 genes 0 species
1 species UBERON:0001803012001
right cardiac atrium 0.008.441 gene 1 gene 19 genes 1 species 1 species UBERON:0002078111911
internal carotid artery -1.0040.890 gene
1 gene 20 genes 0 species
1 species UBERON:0001532012001
1st arch mandibular component -1.0041.150 gene
1 gene 20 genes 0 species
1 species UBERON:0007237012001
endocardial endothelium -1.0012.040 gene
1 gene 20 genes 0 species
1 species UBERON:0005316012001
Ammon's horn 0.0037.842 genes 2 genes 17 genes 2 species 2 species UBERON:0001954221722
epiblast (generic) -1.0025.750 gene
1 gene 20 genes 0 species
1 species UBERON:0002532012001
adrenal cortex -1.0041.810 gene
2 genes 19 genes 0 species
2 species UBERON:0001235021902
sternocleidomastoid -1.0039.100 gene
1 gene 20 genes 0 species
1 species UBERON:0001128012001
brainstem -1.0038.790 gene
3 genes 18 genes 0 species
3 species UBERON:0002298031803
aorta 0.0047.142 genes 2 genes 17 genes 2 species 2 species UBERON:0000947221722
right kidney 1.0081.011 gene 0 gene
20 genes 1 species 0 species
UBERON:0004539102010
retina -0.5039.681 gene 3 genes 17 genes 1 species 3 species UBERON:0000966131713
somite -1.0041.230 gene
1 gene 20 genes 0 species
1 species UBERON:0002329012001
intestine 1.0088.056 genes 0 gene
15 genes 6 species 0 species
UBERON:0000160601560
esophagus 0.0036.522 genes 2 genes 17 genes 2 species 2 species UBERON:0001043221722
myocardium -1.0060.570 gene
1 gene 20 genes 0 species
1 species UBERON:0002349012001
blastula 0.3326.412 genes 1 gene 18 genes 2 species 1 species UBERON:0000307211821
right testis -1.0019.790 gene
1 gene 20 genes 0 species
1 species UBERON:0004534012001
blood -0.5042.922 genes 6 genes 13 genes 2 species 6 species UBERON:0000178261326
adipose tissue 0.3344.654 genes 2 genes 15 genes 4 species 2 species UBERON:0001013421542
embryonic head -1.0011.010 gene
1 gene 20 genes 0 species
1 species UBERON:0008816012001
skeletal muscle tissue 0.0850.957 genes 6 genes 8 genes 7 species 6 species UBERON:000113476876
spleen -0.0995.795 genes 6 genes 10 genes 5 species 6 species UBERON:0002106561056
kidney 1.0076.3120 genes 0 gene
1 gene 20 species 0 species
UBERON:00021132001200
intestinal epithelium -1.0041.670 gene
1 gene 20 genes 0 species
1 species UBERON:0001277012001
pericardium 0.0041.831 gene 1 gene 19 genes 1 species 1 species UBERON:0002407111911
lung, swim bladder 0.3859.719 genes 4 genes 8 genes 9 species 4 species UBERON:0002048, UBERON:000686094894
cardiac atrium -0.3348.401 gene 2 genes 18 genes 1 species 2 species UBERON:0002081121812
ventral horn of spinal cord -1.0038.710 gene
1 gene 20 genes 0 species
1 species UBERON:0002257012001
islet of Langerhans 1.0049.562 genes 0 gene
19 genes 2 species 0 species
UBERON:0000006201920
neural tube -1.0034.530 gene
1 gene 20 genes 0 species
1 species UBERON:0001049012001
pleura -1.0048.800 gene
1 gene 20 genes 0 species
1 species UBERON:0000977012001
endocardial cushion -1.0039.650 gene
1 gene 20 genes 0 species
1 species UBERON:0002062012001
cerebral hemisphere 1.0038.938 genes 0 gene
13 genes 8 species 0 species
UBERON:0001869801380
pigmented layer of retina -1.0040.590 gene
2 genes 19 genes 0 species
2 species UBERON:0001782021902
1st arch maxillary component -1.0041.060 gene
1 gene 20 genes 0 species
1 species UBERON:0007238012001
cerebellar cortex -1.0037.220 gene
4 genes 17 genes 0 species
4 species UBERON:0002129041704
heart 0.2239.3111 genes 7 genes 3 genes 11 species 7 species UBERON:00009481173117
liver 1.0099.1721 genes 0 gene
0 gene
21 species 0 species
UBERON:00021072100210
colon -0.3337.753 genes 6 genes 12 genes 3 species 6 species UBERON:0001155361236
left testis -1.0021.000 gene
1 gene 20 genes 0 species
1 species UBERON:0004533012001
muscle organ 0.8048.409 genes 1 gene 11 genes 9 species 1 species UBERON:0001630911191
striatum 1.0039.622 genes 0 gene
19 genes 2 species 0 species
UBERON:0002435201920
myocardium of ventricle -1.0039.700 gene
1 gene 20 genes 0 species
1 species UBERON:0001083012001
neurohypophysis -1.0025.080 gene
1 gene 20 genes 0 species
1 species UBERON:0002198012001
presomitic mesoderm -1.0044.380 gene
1 gene 20 genes 0 species
1 species UBERON:0003059012001
olfactory epithelium -1.0038.600 gene
1 gene 20 genes 0 species
1 species UBERON:0001997012001
dorsal root ganglion -1.0045.470 gene
2 genes 19 genes 0 species
2 species UBERON:0000044021902
aortic valve -1.0042.310 gene
1 gene 20 genes 0 species
1 species UBERON:0002137012001
ciliary body -1.0037.490 gene
1 gene 20 genes 0 species
1 species UBERON:0001775012001
ear vesicle -1.0044.230 gene
1 gene 20 genes 0 species
1 species UBERON:0003051012001
gall bladder 0.3374.502 genes 1 gene 18 genes 2 species 1 species UBERON:0002110211821
atrioventricular valve 1.0039.641 gene 0 gene
20 genes 1 species 0 species
UBERON:0002133102010
parathyroid gland, pharyngeal gill -1.0027.970 gene
1 gene 20 genes 0 species
1 species UBERON:0001132, UBERON:0000206012001
gingiva -1.0039.270 gene
1 gene 20 genes 0 species
1 species UBERON:0001828012001
peritoneum 1.0041.411 gene 0 gene
20 genes 1 species 0 species
UBERON:0002358102010
zygote 1.0057.461 gene 0 gene
20 genes 1 species 0 species
CL:0000365102010
medulla oblongata -1.0042.740 gene
2 genes 19 genes 0 species
2 species UBERON:0001896021902
pylorus -1.0041.490 gene
1 gene 20 genes 0 species
1 species UBERON:0001166012001
caudate nucleus -1.0024.440 gene
1 gene 20 genes 0 species
1 species UBERON:0001873012001
embryo 1.0079.0610 genes 0 gene
11 genes 10 species 0 species
UBERON:000092210011100
left ovary -1.0030.780 gene
1 gene 20 genes 0 species
1 species UBERON:0002119012001

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