We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
chordate pharynx 0.0057.881 gene 1 gene 12 genes 1 species 1 species UBERON:0001042111211
postcranial axial skeleton 1.0058.711 gene 0 gene
13 genes 1 species 0 species
UBERON:0002090101310
epithelial cell of pancreas 1.0050.541 gene 0 gene
13 genes 1 species 0 species
CL:0000083101310
inferior olivary complex 1.0068.491 gene 0 gene
13 genes 1 species 0 species
UBERON:0002127101310
hindlimb, pelvic fin 1.0061.645 genes 0 gene
9 genes 5 species 0 species
UBERON:0002103, UBERON:000015250950
hypothalamus 1.0078.703 genes 0 gene
11 genes 3 species 0 species
UBERON:0001898301130
nervous system 1.0053.6813 genes 0 gene
1 gene 13 species 0 species
UBERON:00010161301130
gingival epithelium 1.0076.291 gene 0 gene
13 genes 1 species 0 species
UBERON:0001949101310
gastrula 0.0022.481 gene 1 gene 12 genes 1 species 1 species UBERON:0004734111211
midbrain 1.0071.952 genes 0 gene
12 genes 2 species 0 species
UBERON:0001891201220
retinal neural layer 1.0058.091 gene 0 gene
13 genes 1 species 0 species
UBERON:0003902101310
cornea -1.0074.990 gene
1 gene 13 genes 0 species
1 species UBERON:0000964011301
hindbrain 1.0071.6210 genes 0 gene
4 genes 10 species 0 species
UBERON:00020281004100
cranial nerve II -1.0059.980 gene
2 genes 12 genes 0 species
2 species UBERON:0000941021202
stomach 1.0089.654 genes 0 gene
10 genes 4 species 0 species
UBERON:0000945401040
pituitary gland 0.5083.403 genes 1 gene 10 genes 3 species 1 species UBERON:0000007311031
inferior vagus X ganglion 1.0073.451 gene 0 gene
13 genes 1 species 0 species
UBERON:0005363101310
female reproductive system 1.0075.5410 genes 0 gene
4 genes 10 species 0 species
UBERON:00004741004100
epithelium of esophagus 1.0062.261 gene 0 gene
13 genes 1 species 0 species
UBERON:0001976101310
kidney epithelium 1.0049.432 genes 0 gene
12 genes 2 species 0 species
UBERON:0004819201220
pancreas 1.0079.673 genes 0 gene
11 genes 3 species 0 species
UBERON:0001264301130
upper leg skin 1.0058.181 gene 0 gene
13 genes 1 species 0 species
UBERON:0004262101310
limb, paired fin 1.0069.537 genes 0 gene
7 genes 7 species 0 species
UBERON:0002101, UBERON:000253470770
face 1.0060.703 genes 0 gene
11 genes 3 species 0 species
UBERON:0001456301130
blood vessel 0.3358.312 genes 1 gene 11 genes 2 species 1 species UBERON:0001981211121
optic choroid 1.0052.061 gene 0 gene
13 genes 1 species 0 species
UBERON:0001776101310
putamen 1.0076.921 gene 0 gene
13 genes 1 species 0 species
UBERON:0001874101310
telencephalon 1.0063.0710 genes 0 gene
4 genes 10 species 0 species
UBERON:00018931004100
right ovary 1.0082.911 gene 0 gene
13 genes 1 species 0 species
UBERON:0002118101310
testis 0.5787.4411 genes 3 genes 0 gene
11 species 3 species UBERON:00004731130113
autopod skin 1.0030.891 gene 0 gene
13 genes 1 species 0 species
UBERON:0015790101310
multi-cellular organism 1.0097.7014 genes 0 gene
0 gene
14 species 0 species
UBERON:00004681400140
ventricular zone 1.0057.752 genes 0 gene
12 genes 2 species 0 species
UBERON:0003053201220
pharyngeal arch 1.0083.331 gene 0 gene
13 genes 1 species 0 species
UBERON:0002539101310
embryonic post-anal tail 0.0067.201 gene 1 gene 12 genes 1 species 1 species UBERON:0007144111211
peripheral nervous system 1.0059.592 genes 0 gene
12 genes 2 species 0 species
UBERON:0000010201220
central nervous system 1.0079.8413 genes 0 gene
1 gene 13 species 0 species
UBERON:00010171301130
fibroblast 0.3374.302 genes 1 gene 11 genes 2 species 1 species CL:0000057211121
mesonephros 1.0073.942 genes 0 gene
12 genes 2 species 0 species
UBERON:0000080201220
head 1.0074.094 genes 0 gene
10 genes 4 species 0 species
UBERON:0000033401040
choroid plexus epithelium 1.0064.891 gene 0 gene
13 genes 1 species 0 species
UBERON:0003911101310
trigeminal ganglion 1.0080.181 gene 0 gene
13 genes 1 species 0 species
UBERON:0001675101310
forebrain 1.0069.0810 genes 0 gene
4 genes 10 species 0 species
UBERON:00018901004100
caecum 1.0080.901 gene 0 gene
13 genes 1 species 0 species
UBERON:0001153101310
diencephalon 1.0073.663 genes 0 gene
11 genes 3 species 0 species
UBERON:0001894301130
olfactory bulb 1.0061.852 genes 0 gene
12 genes 2 species 0 species
UBERON:0002264201220
heart left ventricle, primary heart field 1.0088.272 genes 0 gene
12 genes 2 species 0 species
UBERON:0002084, UBERON:0004140201220
lens of camera-type eye 1.0066.792 genes 0 gene
12 genes 2 species 0 species
UBERON:0000965201220
ear 1.0067.291 gene 0 gene
13 genes 1 species 0 species
UBERON:0001690101310
brain 0.8674.6713 genes 1 gene 0 gene
13 species 1 species UBERON:00009551310131
collection of basal ganglia 1.0066.652 genes 0 gene
12 genes 2 species 0 species
UBERON:0010011201220
male germ cell 1.0060.662 genes 0 gene
12 genes 2 species 0 species
CL:0000015201220
smooth muscle tissue 1.0080.782 genes 0 gene
12 genes 2 species 0 species
UBERON:0001135201220
upper arm skin 1.0066.901 gene 0 gene
13 genes 1 species 0 species
UBERON:0004263101310
heart right ventricle 1.0059.171 gene 0 gene
13 genes 1 species 0 species
UBERON:0002080101310
lip 1.0064.661 gene 0 gene
13 genes 1 species 0 species
UBERON:0001833101310
gonad 1.0061.5213 genes 0 gene
1 gene 13 species 0 species
UBERON:00009911301130
skin of hip 1.0058.181 gene 0 gene
13 genes 1 species 0 species
UBERON:0001554101310
female gonad 0.7881.998 genes 1 gene 5 genes 8 species 1 species UBERON:000099281581
internal ear 1.0051.941 gene 0 gene
13 genes 1 species 0 species
UBERON:0001846101310
ileum 1.0092.373 genes 0 gene
11 genes 3 species 0 species
UBERON:0002116301130
cartilage tissue 1.0073.722 genes 0 gene
12 genes 2 species 0 species
UBERON:0002418201220
thyroid gland 1.0088.883 genes 0 gene
11 genes 3 species 0 species
UBERON:0002046301130
adenohypophysis 1.0086.181 gene 0 gene
13 genes 1 species 0 species
UBERON:0002196101310
midbrain tegmentum 0.0060.851 gene 1 gene 12 genes 1 species 1 species UBERON:0001943111211
larva 1.0048.381 gene 0 gene
13 genes 1 species 0 species
UBERON:0002548101310
bone element 1.0064.275 genes 0 gene
9 genes 5 species 0 species
UBERON:000147450950
cerebellum 1.0078.0210 genes 0 gene
4 genes 10 species 0 species
UBERON:00020371004100
fundus of stomach 1.0085.641 gene 0 gene
13 genes 1 species 0 species
UBERON:0001160101310
cardiac ventricle 0.3377.472 genes 1 gene 11 genes 2 species 1 species UBERON:0002082211121
caudal tuberculum, substantia nigra 1.0076.331 gene 0 gene
13 genes 1 species 0 species
UBERON:2000633, UBERON:0002038101310
camera-type eye 1.0086.992 genes 0 gene
12 genes 2 species 0 species
UBERON:0000019201220
choroid plexus 1.0062.752 genes 0 gene
12 genes 2 species 0 species
UBERON:0001886201220
thymus 1.0084.754 genes 0 gene
10 genes 4 species 0 species
UBERON:0002370401040
forelimb, pectoral fin 0.3370.822 genes 1 gene 11 genes 2 species 1 species UBERON:0002102, UBERON:0000151211121
tendon 1.0070.291 gene 0 gene
13 genes 1 species 0 species
UBERON:0000043101310
olfactory cortex 0.0056.241 gene 1 gene 12 genes 1 species 1 species UBERON:0002894111211
calcareous tooth -1.0063.140 gene
1 gene 13 genes 0 species
1 species UBERON:0001091011301
Ammon's horn 1.0074.242 genes 0 gene
12 genes 2 species 0 species
UBERON:0001954201220
epiblast (generic) 1.0065.901 gene 0 gene
13 genes 1 species 0 species
UBERON:0002532101310
adrenal cortex 1.0079.321 gene 0 gene
13 genes 1 species 0 species
UBERON:0001235101310
brainstem 1.0081.813 genes 0 gene
11 genes 3 species 0 species
UBERON:0002298301130
aorta 1.0078.052 genes 0 gene
12 genes 2 species 0 species
UBERON:0000947201220
right kidney 1.0072.231 gene 0 gene
13 genes 1 species 0 species
UBERON:0004539101310
retina 0.3360.742 genes 1 gene 11 genes 2 species 1 species UBERON:0000966211121
intestine 1.0072.817 genes 0 gene
7 genes 7 species 0 species
UBERON:000016070770
esophagus 1.0086.893 genes 0 gene
11 genes 3 species 0 species
UBERON:0001043301130
myocardium 1.0078.911 gene 0 gene
13 genes 1 species 0 species
UBERON:0002349101310
blastula 0.5038.673 genes 1 gene 10 genes 3 species 1 species UBERON:0000307311031
right testis 1.0069.331 gene 0 gene
13 genes 1 species 0 species
UBERON:0004534101310
blood 0.5095.653 genes 1 gene 10 genes 3 species 1 species UBERON:0000178311031
adipose tissue 1.0071.423 genes 0 gene
11 genes 3 species 0 species
UBERON:0001013301130
skeletal muscle tissue 0.7878.468 genes 1 gene 5 genes 8 species 1 species UBERON:000113481581
integumental system 1.0055.146 genes 0 gene
8 genes 6 species 0 species
UBERON:000241660860
cardiovascular system 1.0055.1414 genes 0 gene
0 gene
14 species 0 species
UBERON:00045351400140
spleen 1.0096.446 genes 0 gene
8 genes 6 species 0 species
UBERON:000210660860
kidney 1.0092.3214 genes 0 gene
0 gene
14 species 0 species
UBERON:00021131400140
pericardium 1.0086.562 genes 0 gene
12 genes 2 species 0 species
UBERON:0002407201220
endoderm 1.0081.661 gene 0 gene
13 genes 1 species 0 species
UBERON:0000925101310
lung, swim bladder 0.7882.758 genes 1 gene 5 genes 8 species 1 species UBERON:0002048, UBERON:000686081581
cardiac atrium 0.0074.561 gene 1 gene 12 genes 1 species 1 species UBERON:0002081111211
islet of Langerhans 1.0078.292 genes 0 gene
12 genes 2 species 0 species
UBERON:0000006201220
neural tube 1.0070.251 gene 0 gene
13 genes 1 species 0 species
UBERON:0001049101310
pleura 1.0064.071 gene 0 gene
13 genes 1 species 0 species
UBERON:0000977101310
appendicular skeleton 0.0063.631 gene 1 gene 12 genes 1 species 1 species UBERON:0002091111211
pigmented layer of retina 1.0051.281 gene 0 gene
13 genes 1 species 0 species
UBERON:0001782101310
cerebellar cortex 1.0078.874 genes 0 gene
10 genes 4 species 0 species
UBERON:0002129401040
cranial ganglion 0.0069.211 gene 1 gene 12 genes 1 species 1 species UBERON:0001714111211
heart 0.8580.1012 genes 1 gene 1 gene 12 species 1 species UBERON:00009481211121
liver 1.0097.6814 genes 0 gene
0 gene
14 species 0 species
UBERON:00021071400140
cranium -1.0053.530 gene
1 gene 13 genes 0 species
1 species UBERON:0003128011301
colon 1.0082.145 genes 0 gene
9 genes 5 species 0 species
UBERON:000115550950
left testis 1.0070.721 gene 0 gene
13 genes 1 species 0 species
UBERON:0004533101310
telencephalic ventricle 1.0057.111 gene 0 gene
13 genes 1 species 0 species
UBERON:0002285101310
muscle organ 0.8063.879 genes 1 gene 4 genes 9 species 1 species UBERON:000163091491
striatum 1.0067.692 genes 0 gene
12 genes 2 species 0 species
UBERON:0002435201220
olfactory epithelium 1.0053.361 gene 0 gene
13 genes 1 species 0 species
UBERON:0001997101310
meninx 1.0073.671 gene 0 gene
13 genes 1 species 0 species
UBERON:0002360101310
dorsal root ganglion 0.0075.211 gene 1 gene 12 genes 1 species 1 species UBERON:0000044111211
musculature 1.0065.3810 genes 0 gene
4 genes 10 species 0 species
UBERON:00010151004100
gall bladder 1.0091.481 gene 0 gene
13 genes 1 species 0 species
UBERON:0002110101310
parathyroid gland, pharyngeal gill -1.0015.730 gene
1 gene 13 genes 0 species
1 species UBERON:0001132, UBERON:0000206011301
renal system 1.0052.7014 genes 0 gene
0 gene
14 species 0 species
UBERON:00010081400140
gingiva 1.0063.601 gene 0 gene
13 genes 1 species 0 species
UBERON:0001828101310
peritoneum 1.0076.041 gene 0 gene
13 genes 1 species 0 species
UBERON:0002358101310
zygote 1.0067.691 gene 0 gene
13 genes 1 species 0 species
CL:0000365101310
respiratory system 1.0055.538 genes 0 gene
6 genes 8 species 0 species
UBERON:000100480680
medulla oblongata 0.0080.291 gene 1 gene 12 genes 1 species 1 species UBERON:0001896111211
pylorus 1.0083.461 gene 0 gene
13 genes 1 species 0 species
UBERON:0001166101310
caudate nucleus 1.0078.461 gene 0 gene
13 genes 1 species 0 species
UBERON:0001873101310
embryo 1.0074.558 genes 0 gene
6 genes 8 species 0 species
UBERON:000092280680
left ovary 1.0079.531 gene 0 gene
13 genes 1 species 0 species
UBERON:0002119101310

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