We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 16 genes 0 species
1 species UBERON:0002206011601
chordate pharynx 0.0057.881 gene 1 gene 15 genes 1 species 1 species UBERON:0001042111511
optic fissure 1.0062.151 gene 0 gene
16 genes 1 species 0 species
UBERON:0005412101610
postcranial axial skeleton -1.0053.710 gene
1 gene 16 genes 0 species
1 species UBERON:0002090011601
epithelial cell of pancreas -1.0065.830 gene
1 gene 16 genes 0 species
1 species CL:0000083011601
semi-lunar valve 1.0037.771 gene 0 gene
16 genes 1 species 0 species
UBERON:0005623101610
inferior olivary complex -1.0065.420 gene
1 gene 16 genes 0 species
1 species UBERON:0002127011601
brain blood vessel 1.0056.791 gene 0 gene
16 genes 1 species 0 species
UBERON:0003499101610
hindlimb, pelvic fin 1.0054.976 genes 0 gene
11 genes 6 species 0 species
UBERON:0002103, UBERON:0000152601160
hypothalamus 1.0072.416 genes 0 gene
11 genes 6 species 0 species
UBERON:0001898601160
nervous system 1.0053.6817 genes 0 gene
0 gene
17 species 0 species
UBERON:00010161700170
gingival epithelium -1.0062.270 gene
1 gene 16 genes 0 species
1 species UBERON:0001949011601
gastrula 0.0066.861 gene 1 gene 15 genes 1 species 1 species UBERON:0004734111511
otic placode 1.0055.851 gene 0 gene
16 genes 1 species 0 species
UBERON:0003069101610
cleaving embryo 1.0052.761 gene 0 gene
16 genes 1 species 0 species
UBERON:0007010101610
midbrain 1.0065.022 genes 0 gene
15 genes 2 species 0 species
UBERON:0001891201520
retinal neural layer 1.0031.521 gene 0 gene
16 genes 1 species 0 species
UBERON:0003902101610
cornea 1.0046.821 gene 0 gene
16 genes 1 species 0 species
UBERON:0000964101610
hindbrain 1.0067.4514 genes 0 gene
3 genes 14 species 0 species
UBERON:00020281403140
cranial nerve II 0.0062.061 gene 1 gene 15 genes 1 species 1 species UBERON:0000941111511
stomach 0.6761.765 genes 1 gene 11 genes 5 species 1 species UBERON:0000945511151
pituitary gland 0.4368.105 genes 2 genes 10 genes 5 species 2 species UBERON:0000007521052
inferior vagus X ganglion 1.0066.961 gene 0 gene
16 genes 1 species 0 species
UBERON:0005363101610
female reproductive system 1.0064.5614 genes 0 gene
3 genes 14 species 0 species
UBERON:00004741403140
epithelium of esophagus 1.0051.711 gene 0 gene
16 genes 1 species 0 species
UBERON:0001976101610
pancreas 1.0071.974 genes 0 gene
13 genes 4 species 0 species
UBERON:0001264401340
kidney epithelium 1.0048.462 genes 0 gene
15 genes 2 species 0 species
UBERON:0004819201520
upper leg skin -1.0059.320 gene
1 gene 16 genes 0 species
1 species UBERON:0004262011601
extra-ocular muscle 1.0063.561 gene 0 gene
16 genes 1 species 0 species
UBERON:0001601101610
limb, paired fin 1.0077.797 genes 0 gene
10 genes 7 species 0 species
UBERON:0002101, UBERON:0002534701070
manus, pectoral fin radial bone 1.0054.731 gene 0 gene
16 genes 1 species 0 species
UBERON:0002398, UBERON:2001586101610
face 1.0060.707 genes 0 gene
10 genes 7 species 0 species
UBERON:0001456701070
blood vessel 1.0058.313 genes 0 gene
14 genes 3 species 0 species
UBERON:0001981301430
putamen 1.0084.121 gene 0 gene
16 genes 1 species 0 species
UBERON:0001874101610
telencephalon 1.0057.8513 genes 0 gene
4 genes 13 species 0 species
UBERON:00018931304130
utricle of membranous labyrinth -1.0038.440 gene
1 gene 16 genes 0 species
1 species UBERON:0001853011601
eyeball of camera-type eye 1.0044.114 genes 0 gene
13 genes 4 species 0 species
UBERON:0010230401340
right ovary 1.0068.061 gene 0 gene
16 genes 1 species 0 species
UBERON:0002118101610
testis 0.8878.8316 genes 1 gene 0 gene
16 species 1 species UBERON:00004731610161
male reproductive system 1.0064.7516 genes 0 gene
1 gene 16 species 0 species
UBERON:00000791601160
multi-cellular organism 1.0078.5317 genes 0 gene
0 gene
17 species 0 species
UBERON:00004681700170
ventricular zone 1.0048.402 genes 0 gene
15 genes 2 species 0 species
UBERON:0003053201520
skin epidermis 1.0042.032 genes 0 gene
15 genes 2 species 0 species
UBERON:0001003201520
embryonic post-anal tail 1.0060.951 gene 0 gene
16 genes 1 species 0 species
UBERON:0007144101610
peripheral nervous system 1.0059.592 genes 0 gene
15 genes 2 species 0 species
UBERON:0000010201520
central nervous system 1.0050.8417 genes 0 gene
0 gene
17 species 0 species
UBERON:00010171700170
fibroblast 1.0065.904 genes 0 gene
13 genes 4 species 0 species
CL:0000057401340
iris -1.0038.860 gene
1 gene 16 genes 0 species
1 species UBERON:0001769011601
head 1.0054.648 genes 0 gene
9 genes 8 species 0 species
UBERON:000003380980
choroid plexus epithelium 1.0076.942 genes 0 gene
15 genes 2 species 0 species
UBERON:0003911201520
tongue muscle 1.0076.291 gene 0 gene
16 genes 1 species 0 species
UBERON:0000378101610
trigeminal ganglion 1.0063.842 genes 0 gene
15 genes 2 species 0 species
UBERON:0001675201520
forebrain 1.0050.0113 genes 0 gene
4 genes 13 species 0 species
UBERON:00018901304130
vertebral column -1.0046.040 gene
1 gene 16 genes 0 species
1 species UBERON:0001130011601
caecum 0.5086.203 genes 1 gene 13 genes 3 species 1 species UBERON:0001153311331
olfactory bulb 0.3376.482 genes 1 gene 14 genes 2 species 1 species UBERON:0002264211421
heart left ventricle, primary heart field 0.6073.794 genes 1 gene 12 genes 4 species 1 species UBERON:0002084, UBERON:0004140411241
diencephalon 1.0072.346 genes 0 gene
11 genes 6 species 0 species
UBERON:0001894601160
lens of camera-type eye 1.0064.541 gene 0 gene
16 genes 1 species 0 species
UBERON:0000965101610
ear 1.0051.852 genes 0 gene
15 genes 2 species 0 species
UBERON:0001690201520
brain 1.0069.4117 genes 0 gene
0 gene
17 species 0 species
UBERON:00009551700170
collection of basal ganglia 1.0055.542 genes 0 gene
15 genes 2 species 0 species
UBERON:0010011201520
male germ cell 0.6076.454 genes 1 gene 12 genes 4 species 1 species CL:0000015411241
upper arm skin -1.0059.540 gene
1 gene 16 genes 0 species
1 species UBERON:0004263011601
smooth muscle tissue 1.0075.912 genes 0 gene
15 genes 2 species 0 species
UBERON:0001135201520
heart right ventricle 0.3371.492 genes 1 gene 14 genes 2 species 1 species UBERON:0002080211421
lip 1.0066.321 gene 0 gene
16 genes 1 species 0 species
UBERON:0001833101610
gonad 1.0061.5216 genes 0 gene
1 gene 16 species 0 species
UBERON:00009911601160
skin of hip -1.0065.410 gene
1 gene 16 genes 0 species
1 species UBERON:0001554011601
female gonad 1.0095.9211 genes 0 gene
6 genes 11 species 0 species
UBERON:00009921106110
internal ear 1.0084.491 gene 0 gene
16 genes 1 species 0 species
UBERON:0001846101610
ileum 0.2074.453 genes 2 genes 12 genes 3 species 2 species UBERON:0002116321232
mitral valve 1.0040.521 gene 0 gene
16 genes 1 species 0 species
UBERON:0002135101610
mouth 1.0065.705 genes 0 gene
12 genes 5 species 0 species
UBERON:0000165501250
olfactory lobe 1.0057.983 genes 0 gene
14 genes 3 species 0 species
UBERON:0005366301430
cartilage tissue 1.0076.732 genes 0 gene
15 genes 2 species 0 species
UBERON:0002418201520
blastopore, primitive streak 1.0064.051 gene 0 gene
16 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101610
thyroid gland 0.6076.184 genes 1 gene 12 genes 4 species 1 species UBERON:0002046411241
adenohypophysis 1.0069.602 genes 0 gene
15 genes 2 species 0 species
UBERON:0002196201520
midbrain tegmentum 1.0060.852 genes 0 gene
15 genes 2 species 0 species
UBERON:0001943201520
choroid plexus of fourth ventricle 1.0067.671 gene 0 gene
16 genes 1 species 0 species
UBERON:0002290101610
larva 1.0036.731 gene 0 gene
16 genes 1 species 0 species
UBERON:0002548101610
bone element 1.0041.616 genes 0 gene
11 genes 6 species 0 species
UBERON:0001474601160
cerebellum 0.8764.4814 genes 1 gene 2 genes 14 species 1 species UBERON:00020371412141
fundus of stomach 1.0070.681 gene 0 gene
16 genes 1 species 0 species
UBERON:0001160101610
pineal body -1.0040.470 gene
1 gene 16 genes 0 species
1 species UBERON:0001905011601
dermis 1.0059.641 gene 0 gene
16 genes 1 species 0 species
UBERON:0002067101610
cardiac ventricle 1.0064.564 genes 0 gene
13 genes 4 species 0 species
UBERON:0002082401340
outflow tract 1.0063.042 genes 0 gene
15 genes 2 species 0 species
UBERON:0004145201520
saccule of membranous labyrinth 1.0047.221 gene 0 gene
16 genes 1 species 0 species
UBERON:0001854101610
caudal tuberculum, substantia nigra 0.0074.141 gene 1 gene 15 genes 1 species 1 species UBERON:2000633, UBERON:0002038111511
camera-type eye 1.0047.975 genes 0 gene
12 genes 5 species 0 species
UBERON:0000019501250
choroid plexus 1.0062.293 genes 0 gene
14 genes 3 species 0 species
UBERON:0001886301430
thymus 0.6072.164 genes 1 gene 12 genes 4 species 1 species UBERON:0002370411241
forelimb, pectoral fin 1.0070.823 genes 0 gene
14 genes 3 species 0 species
UBERON:0002102, UBERON:0000151301430
tendon 1.0069.701 gene 0 gene
16 genes 1 species 0 species
UBERON:0000043101610
motor neuron -1.0068.840 gene
1 gene 16 genes 0 species
1 species CL:0000100011601
olfactory cortex 1.0056.242 genes 0 gene
15 genes 2 species 0 species
UBERON:0002894201520
epithelium of lens 1.0053.791 gene 0 gene
16 genes 1 species 0 species
UBERON:0001803101610
right cardiac atrium 1.0035.752 genes 0 gene
15 genes 2 species 0 species
UBERON:0002078201520
internal carotid artery 1.0079.701 gene 0 gene
16 genes 1 species 0 species
UBERON:0001532101610
1st arch mandibular component 1.0063.081 gene 0 gene
16 genes 1 species 0 species
UBERON:0007237101610
endocardial endothelium -1.0012.040 gene
1 gene 16 genes 0 species
1 species UBERON:0005316011601
calcareous tooth -1.0063.140 gene
1 gene 16 genes 0 species
1 species UBERON:0001091011601
Ammon's horn 1.0076.575 genes 0 gene
12 genes 5 species 0 species
UBERON:0001954501250
epiblast (generic) 1.0059.401 gene 0 gene
16 genes 1 species 0 species
UBERON:0002532101610
adrenal cortex 1.0064.862 genes 0 gene
15 genes 2 species 0 species
UBERON:0001235201520
sternocleidomastoid 1.0057.411 gene 0 gene
16 genes 1 species 0 species
UBERON:0001128101610
brainstem 0.6052.164 genes 1 gene 12 genes 4 species 1 species UBERON:0002298411241
aorta 1.0065.393 genes 0 gene
14 genes 3 species 0 species
UBERON:0000947301430
right kidney 1.0071.501 gene 0 gene
16 genes 1 species 0 species
UBERON:0004539101610
retina 0.5050.483 genes 1 gene 13 genes 3 species 1 species UBERON:0000966311331
somite 1.0055.091 gene 0 gene
16 genes 1 species 0 species
UBERON:0002329101610
intestine 1.0066.158 genes 0 gene
9 genes 8 species 0 species
UBERON:000016080980
esophagus 1.0071.094 genes 0 gene
13 genes 4 species 0 species
UBERON:0001043401340
myocardium 0.0069.241 gene 1 gene 15 genes 1 species 1 species UBERON:0002349111511
blastula 1.0075.793 genes 0 gene
14 genes 3 species 0 species
UBERON:0000307301430
right testis 1.0059.131 gene 0 gene
16 genes 1 species 0 species
UBERON:0004534101610
blood 1.0085.658 genes 0 gene
9 genes 8 species 0 species
UBERON:000017880980
adipose tissue 1.0066.826 genes 0 gene
11 genes 6 species 0 species
UBERON:0001013601160
kidney blood vessel -1.0059.990 gene
1 gene 16 genes 0 species
1 species UBERON:0003517011601
embryonic head 0.0013.831 gene 1 gene 15 genes 1 species 1 species UBERON:0008816111511
skeletal muscle tissue 0.6062.208 genes 2 genes 7 genes 8 species 2 species UBERON:000113482782
integumental system 1.0055.148 genes 0 gene
9 genes 8 species 0 species
UBERON:000241680980
cardiovascular system 1.0055.1416 genes 0 gene
1 gene 16 species 0 species
UBERON:00045351601160
spleen 1.0089.0411 genes 0 gene
6 genes 11 species 0 species
UBERON:00021061106110
kidney 1.0068.4117 genes 0 gene
0 gene
17 species 0 species
UBERON:00021131700170
intestinal epithelium 1.0041.671 gene 0 gene
16 genes 1 species 0 species
UBERON:0001277101610
pericardium 1.0068.102 genes 0 gene
15 genes 2 species 0 species
UBERON:0002407201520
lung, swim bladder 0.8278.7310 genes 1 gene 6 genes 10 species 1 species UBERON:0002048, UBERON:00068601016101
cardiac atrium 0.5069.533 genes 1 gene 13 genes 3 species 1 species UBERON:0002081311331
ventral horn of spinal cord 1.0056.051 gene 0 gene
16 genes 1 species 0 species
UBERON:0002257101610
islet of Langerhans 1.0057.072 genes 0 gene
15 genes 2 species 0 species
UBERON:0000006201520
neural tube 1.0068.812 genes 0 gene
15 genes 2 species 0 species
UBERON:0001049201520
pleura 1.0050.691 gene 0 gene
16 genes 1 species 0 species
UBERON:0000977101610
endocardial cushion 1.0058.321 gene 0 gene
16 genes 1 species 0 species
UBERON:0002062101610
cerebral hemisphere 1.0038.9313 genes 0 gene
4 genes 13 species 0 species
UBERON:00018691304130
appendicular skeleton 1.0063.632 genes 0 gene
15 genes 2 species 0 species
UBERON:0002091201520
pigmented layer of retina -1.0057.810 gene
2 genes 15 genes 0 species
2 species UBERON:0001782021502
1st arch maxillary component 1.0063.441 gene 0 gene
16 genes 1 species 0 species
UBERON:0007238101610
cerebellar cortex 1.0065.874 genes 0 gene
13 genes 4 species 0 species
UBERON:0002129401340
cranial ganglion 1.0061.522 genes 0 gene
15 genes 2 species 0 species
UBERON:0001714201520
heart 1.0072.2215 genes 0 gene
2 genes 15 species 0 species
UBERON:00009481502150
liver 1.0076.2617 genes 0 gene
0 gene
17 species 0 species
UBERON:00021071700170
cranium 1.0053.531 gene 0 gene
16 genes 1 species 0 species
UBERON:0003128101610
ileal epithelium 1.0069.871 gene 0 gene
16 genes 1 species 0 species
UBERON:0008345101610
colon 0.5667.017 genes 2 genes 8 genes 7 species 2 species UBERON:000115572872
left testis 1.0058.321 gene 0 gene
16 genes 1 species 0 species
UBERON:0004533101610
muscle organ 1.0060.0212 genes 0 gene
5 genes 12 species 0 species
UBERON:00016301205120
striatum 1.0044.412 genes 0 gene
15 genes 2 species 0 species
UBERON:0002435201520
myocardium of ventricle 0.0039.701 gene 1 gene 15 genes 1 species 1 species UBERON:0001083111511
neurohypophysis 1.0057.831 gene 0 gene
16 genes 1 species 0 species
UBERON:0002198101610
presomitic mesoderm 1.0053.401 gene 0 gene
16 genes 1 species 0 species
UBERON:0003059101610
olfactory epithelium -1.0043.800 gene
1 gene 16 genes 0 species
1 species UBERON:0001997011601
meninx -1.0063.140 gene
1 gene 16 genes 0 species
1 species UBERON:0002360011601
dorsal root ganglion 0.0063.181 gene 1 gene 15 genes 1 species 1 species UBERON:0000044111511
aortic valve 1.0042.311 gene 0 gene
16 genes 1 species 0 species
UBERON:0002137101610
ciliary body -1.0037.490 gene
1 gene 16 genes 0 species
1 species UBERON:0001775011601
ear vesicle 1.0056.381 gene 0 gene
16 genes 1 species 0 species
UBERON:0003051101610
musculature 1.0065.3812 genes 0 gene
5 genes 12 species 0 species
UBERON:00010151205120
gall bladder 1.0078.642 genes 0 gene
15 genes 2 species 0 species
UBERON:0002110201520
atrioventricular valve 1.0057.452 genes 0 gene
15 genes 2 species 0 species
UBERON:0002133201520
parathyroid gland, pharyngeal gill 1.0060.631 gene 0 gene
16 genes 1 species 0 species
UBERON:0001132, UBERON:0000206101610
renal system 1.0075.3216 genes 0 gene
1 gene 16 species 0 species
UBERON:00010081601160
gingiva -1.0066.860 gene
1 gene 16 genes 0 species
1 species UBERON:0001828011601
peritoneum 1.0063.871 gene 0 gene
16 genes 1 species 0 species
UBERON:0002358101610
zygote 1.0063.791 gene 0 gene
16 genes 1 species 0 species
CL:0000365101610
respiratory system 1.0055.5311 genes 0 gene
6 genes 11 species 0 species
UBERON:00010041106110
medulla oblongata 0.3365.932 genes 1 gene 14 genes 2 species 1 species UBERON:0001896211421
pylorus -1.0062.850 gene
1 gene 16 genes 0 species
1 species UBERON:0001166011601
caudate nucleus 1.0084.351 gene 0 gene
16 genes 1 species 0 species
UBERON:0001873101610
embryo 0.7557.057 genes 1 gene 9 genes 7 species 1 species UBERON:000092271971
left ovary 1.0066.871 gene 0 gene
16 genes 1 species 0 species
UBERON:0002119101610

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