We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 19 genes 0 species
1 species UBERON:0002206011901
optic fissure 1.0044.921 gene 0 gene
19 genes 1 species 0 species
UBERON:0005412101910
epithelial cell of pancreas -1.0056.060 gene
1 gene 19 genes 0 species
1 species CL:0000083011901
semi-lunar valve 1.0069.891 gene 0 gene
19 genes 1 species 0 species
UBERON:0005623101910
brain blood vessel -1.0039.180 gene
1 gene 19 genes 0 species
1 species UBERON:0003499011901
hypothalamus 1.0062.395 genes 0 gene
15 genes 5 species 0 species
UBERON:0001898501550
myotome 1.0072.082 genes 0 gene
18 genes 1 species 0 species
UBERON:0003082201810
paraxial mesoderm 1.0044.812 genes 0 gene
18 genes 2 species 0 species
UBERON:0003077201820
gingival epithelium -1.0042.370 gene
1 gene 19 genes 0 species
1 species UBERON:0001949011901
gastrula 0.5037.653 genes 1 gene 16 genes 2 species 1 species UBERON:0004734311621
otic placode 1.0064.461 gene 0 gene
19 genes 1 species 0 species
UBERON:0003069101910
cleaving embryo -1.0049.440 gene
2 genes 18 genes 0 species
2 species UBERON:0007010021802
midbrain 1.0062.382 genes 0 gene
18 genes 2 species 0 species
UBERON:0001891201820
retinal neural layer 1.0053.031 gene 0 gene
19 genes 1 species 0 species
UBERON:0003902101910
cornea 1.0054.091 gene 0 gene
19 genes 1 species 0 species
UBERON:0000964101910
hindbrain 1.0061.2914 genes 0 gene
6 genes 14 species 0 species
UBERON:00020281406140
cranial nerve II -1.0038.780 gene
1 gene 19 genes 0 species
1 species UBERON:0000941011901
stomach 1.0055.755 genes 0 gene
15 genes 5 species 0 species
UBERON:0000945501550
pituitary gland 0.3349.244 genes 2 genes 14 genes 4 species 2 species UBERON:0000007421442
inferior vagus X ganglion 1.0044.651 gene 0 gene
19 genes 1 species 0 species
UBERON:0005363101910
female reproductive system 1.0041.519 genes 0 gene
11 genes 9 species 0 species
UBERON:0000474901190
pancreas 1.0046.824 genes 0 gene
16 genes 4 species 0 species
UBERON:0001264401640
kidney epithelium 0.0056.091 gene 1 gene 18 genes 1 species 1 species UBERON:0004819111811
upper leg skin -1.0046.060 gene
1 gene 19 genes 0 species
1 species UBERON:0004262011901
extra-ocular muscle 1.0096.001 gene 0 gene
19 genes 1 species 0 species
UBERON:0001601101910
limb, paired fin 1.0070.0910 genes 0 gene
10 genes 9 species 0 species
UBERON:0002101, UBERON:00025341001090
manus, pectoral fin radial bone -1.0040.660 gene
1 gene 19 genes 0 species
1 species UBERON:0002398, UBERON:2001586011901
putamen 1.0066.061 gene 0 gene
19 genes 1 species 0 species
UBERON:0001874101910
telencephalon 1.0039.1514 genes 0 gene
6 genes 14 species 0 species
UBERON:00018931406140
utricle of membranous labyrinth -1.0038.440 gene
1 gene 19 genes 0 species
1 species UBERON:0001853011901
eyeball of camera-type eye 1.0060.684 genes 0 gene
16 genes 4 species 0 species
UBERON:0010230401640
right ovary -1.0052.050 gene
1 gene 19 genes 0 species
1 species UBERON:0002118011901
testis 0.5873.3715 genes 4 genes 1 gene 15 species 3 species UBERON:00004731541153
male reproductive system 1.0045.4215 genes 0 gene
5 genes 15 species 0 species
UBERON:00000791505150
autopod skin 1.0053.481 gene 0 gene
19 genes 1 species 0 species
UBERON:0015790101910
multi-cellular organism 1.0075.2820 genes 0 gene
0 gene
19 species 0 species
UBERON:00004682000190
ventricular zone 1.0073.732 genes 0 gene
18 genes 2 species 0 species
UBERON:0003053201820
skin epidermis 1.0057.041 gene 0 gene
19 genes 1 species 0 species
UBERON:0001003101910
embryonic post-anal tail 1.0070.021 gene 0 gene
19 genes 1 species 0 species
UBERON:0007144101910
central nervous system 1.0037.2920 genes 0 gene
0 gene
19 species 0 species
UBERON:00010172000190
fibroblast 1.0073.684 genes 0 gene
16 genes 4 species 0 species
CL:0000057401640
mesonephros 1.0011.384 genes 0 gene
16 genes 3 species 0 species
UBERON:0000080401630
iris -1.0038.860 gene
1 gene 19 genes 0 species
1 species UBERON:0001769011901
head 1.0057.648 genes 0 gene
12 genes 7 species 0 species
UBERON:0000033801270
choroid plexus epithelium -1.0039.040 gene
1 gene 19 genes 0 species
1 species UBERON:0003911011901
tongue muscle 1.0094.301 gene 0 gene
19 genes 1 species 0 species
UBERON:0000378101910
trigeminal ganglion 0.0057.091 gene 1 gene 18 genes 1 species 1 species UBERON:0001675111811
forebrain 1.0078.9614 genes 0 gene
6 genes 14 species 0 species
UBERON:00018901406140
vertebral column -1.0046.040 gene
1 gene 19 genes 0 species
1 species UBERON:0001130011901
caecum 1.0043.152 genes 0 gene
18 genes 2 species 0 species
UBERON:0001153201820
heart left ventricle, primary heart field 0.5095.653 genes 1 gene 16 genes 3 species 1 species UBERON:0002084, UBERON:0004140311631
olfactory bulb 1.0045.952 genes 0 gene
18 genes 2 species 0 species
UBERON:0002264201820
lens of camera-type eye 1.0056.291 gene 0 gene
19 genes 1 species 0 species
UBERON:0000965101910
ear 1.0066.501 gene 0 gene
19 genes 1 species 0 species
UBERON:0001690101910
brain 1.0071.2520 genes 0 gene
0 gene
19 species 0 species
UBERON:00009552000190
smooth muscle tissue 1.0095.803 genes 0 gene
17 genes 3 species 0 species
UBERON:0001135301730
upper arm skin -1.0055.580 gene
1 gene 19 genes 0 species
1 species UBERON:0004263011901
heart right ventricle 1.0093.753 genes 0 gene
17 genes 3 species 0 species
UBERON:0002080301730
lip 1.0080.791 gene 0 gene
19 genes 1 species 0 species
UBERON:0001833101910
skin of hip -1.0036.390 gene
1 gene 19 genes 0 species
1 species UBERON:0001554011901
female gonad -0.0856.806 genes 7 genes 7 genes 6 species 6 species UBERON:000099267766
ileum 0.5041.243 genes 1 gene 16 genes 3 species 1 species UBERON:0002116311631
mitral valve 1.0088.051 gene 0 gene
19 genes 1 species 0 species
UBERON:0002135101910
mouth 1.0067.134 genes 0 gene
16 genes 4 species 0 species
UBERON:0000165401640
cartilage tissue 0.0062.281 gene 1 gene 18 genes 1 species 1 species UBERON:0002418111811
blastopore, primitive streak 1.0058.491 gene 0 gene
19 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101910
thyroid gland 0.0058.122 genes 2 genes 16 genes 2 species 2 species UBERON:0002046221622
adenohypophysis 0.0048.231 gene 1 gene 18 genes 1 species 1 species UBERON:0002196111811
pectoral appendage musculature 1.0060.576 genes 0 gene
14 genes 5 species 0 species
UBERON:0007269601450
larva 1.0095.692 genes 0 gene
18 genes 1 species 0 species
UBERON:0002548201810
bone element 1.0052.276 genes 0 gene
14 genes 5 species 0 species
UBERON:0001474601450
cerebellum 1.0060.5214 genes 0 gene
6 genes 14 species 0 species
UBERON:00020371406140
fundus of stomach 1.0055.581 gene 0 gene
19 genes 1 species 0 species
UBERON:0001160101910
pineal body -1.0040.470 gene
1 gene 19 genes 0 species
1 species UBERON:0001905011901
dermis 1.0059.641 gene 0 gene
19 genes 1 species 0 species
UBERON:0002067101910
cardiac ventricle 0.5079.473 genes 1 gene 16 genes 3 species 1 species UBERON:0002082311631
outflow tract 1.0053.972 genes 0 gene
18 genes 2 species 0 species
UBERON:0004145201820
saccule of membranous labyrinth 1.0062.491 gene 0 gene
19 genes 1 species 0 species
UBERON:0001854101910
caudal tuberculum, substantia nigra 0.0063.391 gene 1 gene 18 genes 1 species 1 species UBERON:2000633, UBERON:0002038111811
camera-type eye 1.0044.484 genes 0 gene
16 genes 4 species 0 species
UBERON:0000019401640
choroid plexus 1.0096.111 gene 0 gene
19 genes 1 species 0 species
UBERON:0001886101910
thymus 0.2046.553 genes 2 genes 15 genes 3 species 2 species UBERON:0002370321532
forelimb, pectoral fin 1.0071.566 genes 0 gene
14 genes 5 species 0 species
UBERON:0002102, UBERON:0000151601450
tendon 1.0057.871 gene 0 gene
19 genes 1 species 0 species
UBERON:0000043101910
motor neuron -1.0061.720 gene
1 gene 19 genes 0 species
1 species CL:0000100011901
epithelium of lens 1.0039.681 gene 0 gene
19 genes 1 species 0 species
UBERON:0001803101910
right cardiac atrium 1.0094.372 genes 0 gene
18 genes 2 species 0 species
UBERON:0002078201820
internal carotid artery -1.0063.580 gene
1 gene 19 genes 0 species
1 species UBERON:0001532011901
1st arch mandibular component -1.0041.150 gene
1 gene 19 genes 0 species
1 species UBERON:0007237011901
Ammon's horn 1.0070.613 genes 0 gene
17 genes 3 species 0 species
UBERON:0001954301730
epiblast (generic) 1.0062.641 gene 0 gene
19 genes 1 species 0 species
UBERON:0002532101910
adrenal cortex 0.0041.811 gene 1 gene 18 genes 1 species 1 species UBERON:0001235111811
sternocleidomastoid 1.0096.491 gene 0 gene
19 genes 1 species 0 species
UBERON:0001128101910
brainstem 0.5063.093 genes 1 gene 16 genes 3 species 1 species UBERON:0002298311631
aorta 1.0050.194 genes 0 gene
16 genes 4 species 0 species
UBERON:0000947401640
right kidney -1.0015.290 gene
1 gene 19 genes 0 species
1 species UBERON:0004539011901
retina 0.0046.793 genes 3 genes 14 genes 3 species 2 species UBERON:0000966331432
somite 0.3354.152 genes 1 gene 17 genes 1 species 1 species UBERON:0002329211711
intestine 0.5058.716 genes 2 genes 12 genes 6 species 1 species UBERON:0000160621261
esophagus 1.0093.334 genes 0 gene
16 genes 4 species 0 species
UBERON:0001043401640
myocardium 1.0092.913 genes 0 gene
17 genes 3 species 0 species
UBERON:0002349301730
blastula 0.0025.692 genes 2 genes 16 genes 2 species 2 species UBERON:0000307221622
right testis 1.0068.591 gene 0 gene
19 genes 1 species 0 species
UBERON:0004534101910
blood 0.1446.994 genes 3 genes 13 genes 4 species 3 species UBERON:0000178431343
adipose tissue 0.6091.074 genes 1 gene 15 genes 4 species 1 species UBERON:0001013411541
embryonic head 1.0065.761 gene 0 gene
19 genes 1 species 0 species
UBERON:0008816101910
skeletal muscle tissue 1.0098.3613 genes 0 gene
7 genes 12 species 0 species
UBERON:00011341307120
spleen -0.6447.472 genes 9 genes 9 genes 2 species 8 species UBERON:000210629928
kidney 0.8748.1514 genes 1 gene 5 genes 13 species 1 species UBERON:00021131415131
intestinal epithelium -1.0041.670 gene
1 gene 19 genes 0 species
1 species UBERON:0001277011901
pericardium 0.3341.832 genes 1 gene 17 genes 1 species 1 species UBERON:0002407211711
lung, swim bladder 0.1750.527 genes 5 genes 8 genes 7 species 4 species UBERON:0002048, UBERON:000686075874
cardiac atrium 1.0084.684 genes 0 gene
16 genes 4 species 0 species
UBERON:0002081401640
ventral horn of spinal cord -1.0038.710 gene
1 gene 19 genes 0 species
1 species UBERON:0002257011901
islet of Langerhans 1.0066.822 genes 0 gene
18 genes 2 species 0 species
UBERON:0000006201820
neural tube 1.0063.902 genes 0 gene
18 genes 2 species 0 species
UBERON:0001049201820
endocardial cushion -1.0055.950 gene
1 gene 19 genes 0 species
1 species UBERON:0002062011901
cerebral hemisphere 1.0038.9314 genes 0 gene
6 genes 14 species 0 species
UBERON:00018691406140
skeletal joint 1.0055.512 genes 0 gene
18 genes 2 species 0 species
UBERON:0000982201820
pigmented layer of retina 0.0064.331 gene 1 gene 18 genes 1 species 1 species UBERON:0001782111811
1st arch maxillary component -1.0043.550 gene
1 gene 19 genes 0 species
1 species UBERON:0007238011901
cerebellar cortex 1.0067.954 genes 0 gene
16 genes 4 species 0 species
UBERON:0002129401640
heart 0.6596.7114 genes 3 genes 3 genes 13 species 3 species UBERON:00009481433133
liver 0.0042.4910 genes 10 genes 0 gene
10 species 10 species UBERON:0002107101001010
colon 0.5048.686 genes 2 genes 12 genes 6 species 2 species UBERON:0001155621262
left testis 1.0069.151 gene 0 gene
19 genes 1 species 0 species
UBERON:0004533101910
muscle organ 1.0098.4314 genes 0 gene
6 genes 13 species 0 species
UBERON:00016301406130
striatum 1.0040.432 genes 0 gene
18 genes 2 species 0 species
UBERON:0002435201820
myocardium of ventricle 1.0096.053 genes 0 gene
17 genes 3 species 0 species
UBERON:0001083301730
neurohypophysis 1.0048.111 gene 0 gene
19 genes 1 species 0 species
UBERON:0002198101910
presomitic mesoderm 1.0054.492 genes 0 gene
18 genes 2 species 0 species
UBERON:0003059201820
olfactory epithelium -1.0038.600 gene
1 gene 19 genes 0 species
1 species UBERON:0001997011901
dorsal root ganglion 0.0048.951 gene 1 gene 18 genes 1 species 1 species UBERON:0000044111811
aortic valve 1.0065.621 gene 0 gene
19 genes 1 species 0 species
UBERON:0002137101910
ciliary body -1.0037.490 gene
1 gene 19 genes 0 species
1 species UBERON:0001775011901
ear vesicle 1.0068.061 gene 0 gene
19 genes 1 species 0 species
UBERON:0003051101910
musculature 1.0069.3314 genes 0 gene
6 genes 13 species 0 species
UBERON:00010151406130
gall bladder 1.0060.822 genes 0 gene
18 genes 2 species 0 species
UBERON:0002110201820
atrioventricular valve 1.0081.152 genes 0 gene
18 genes 2 species 0 species
UBERON:0002133201820
parathyroid gland, pharyngeal gill 1.0072.862 genes 0 gene
18 genes 1 species 0 species
UBERON:0001132, UBERON:0000206201810
gingiva 1.0059.841 gene 0 gene
19 genes 1 species 0 species
UBERON:0001828101910
peritoneum 1.0041.411 gene 0 gene
19 genes 1 species 0 species
UBERON:0002358101910
zygote 1.0029.221 gene 0 gene
19 genes 1 species 0 species
CL:0000365101910
medulla oblongata 1.0042.821 gene 0 gene
19 genes 1 species 0 species
UBERON:0001896101910
pylorus -1.0041.490 gene
1 gene 19 genes 0 species
1 species UBERON:0001166011901
caudate nucleus 1.0064.361 gene 0 gene
19 genes 1 species 0 species
UBERON:0001873101910
embryo 1.0089.1110 genes 0 gene
10 genes 9 species 0 species
UBERON:00009221001090
left ovary 1.0050.951 gene 0 gene
19 genes 1 species 0 species
UBERON:0002119101910

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