We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0063.771 gene 0 gene
17 genes 1 species 0 species
UBERON:0002206101710
optic fissure -1.0040.620 gene
1 gene 17 genes 0 species
1 species UBERON:0005412011701
semi-lunar valve 1.0053.711 gene 0 gene
17 genes 1 species 0 species
UBERON:0005623101710
brain blood vessel 1.0056.161 gene 0 gene
17 genes 1 species 0 species
UBERON:0003499101710
hypothalamus 1.0087.325 genes 0 gene
13 genes 5 species 0 species
UBERON:0001898501350
paraxial mesoderm 1.0061.552 genes 0 gene
16 genes 2 species 0 species
UBERON:0003077201620
gastrula 1.0071.913 genes 0 gene
15 genes 3 species 0 species
UBERON:0004734301530
otic placode 1.0067.981 gene 0 gene
17 genes 1 species 0 species
UBERON:0003069101710
cleaving embryo 1.0092.942 genes 0 gene
16 genes 2 species 0 species
UBERON:0007010201620
retinal neural layer 1.0088.892 genes 0 gene
16 genes 2 species 0 species
UBERON:0003902201620
midbrain 1.0081.422 genes 0 gene
16 genes 2 species 0 species
UBERON:0001891201620
cornea 1.0057.581 gene 0 gene
17 genes 1 species 0 species
UBERON:0000964101710
hindbrain 1.0082.1713 genes 0 gene
5 genes 13 species 0 species
UBERON:00020281305130
cranial nerve II 1.0055.551 gene 0 gene
17 genes 1 species 0 species
UBERON:0000941101710
stomach 1.0082.815 genes 0 gene
13 genes 5 species 0 species
UBERON:0000945501350
pituitary gland 0.6792.445 genes 1 gene 12 genes 5 species 1 species UBERON:0000007511251
pancreas 1.0085.404 genes 0 gene
14 genes 4 species 0 species
UBERON:0001264401440
extra-ocular muscle -1.0055.340 gene
1 gene 17 genes 0 species
1 species UBERON:0001601011701
limb, paired fin 1.0083.389 genes 0 gene
9 genes 9 species 0 species
UBERON:0002101, UBERON:000253490990
manus, pectoral fin radial bone 1.0065.501 gene 0 gene
17 genes 1 species 0 species
UBERON:0002398, UBERON:2001586101710
putamen 1.0088.631 gene 0 gene
17 genes 1 species 0 species
UBERON:0001874101710
telencephalon 1.0058.9414 genes 0 gene
4 genes 14 species 0 species
UBERON:00018931404140
utricle of membranous labyrinth 1.0057.081 gene 0 gene
17 genes 1 species 0 species
UBERON:0001853101710
eyeball of camera-type eye 1.0055.326 genes 0 gene
12 genes 6 species 0 species
UBERON:0010230601260
right ovary 1.0087.741 gene 0 gene
17 genes 1 species 0 species
UBERON:0002118101710
male reproductive system 1.0067.7517 genes 0 gene
1 gene 17 species 0 species
UBERON:00000791701170
testis 1.0088.6917 genes 0 gene
1 gene 17 species 0 species
UBERON:00004731701170
autopod skin 1.0044.941 gene 0 gene
17 genes 1 species 0 species
UBERON:0015790101710
multi-cellular organism 1.0079.8718 genes 0 gene
0 gene
18 species 0 species
UBERON:00004681800180
ventricular zone 1.0095.002 genes 0 gene
16 genes 2 species 0 species
UBERON:0003053201620
skin epidermis 1.0065.172 genes 0 gene
16 genes 2 species 0 species
UBERON:0001003201620
pharyngeal arch 1.0083.332 genes 0 gene
16 genes 2 species 0 species
UBERON:0002539201620
embryonic post-anal tail 1.0076.141 gene 0 gene
17 genes 1 species 0 species
UBERON:0007144101710
central nervous system 1.0059.2918 genes 0 gene
0 gene
18 species 0 species
UBERON:00010171800180
fibroblast 1.0080.703 genes 0 gene
15 genes 3 species 0 species
CL:0000057301530
mesonephros 1.0053.063 genes 0 gene
15 genes 3 species 0 species
UBERON:0000080301530
iris -1.0046.260 gene
1 gene 17 genes 0 species
1 species UBERON:0001769011701
head 1.0071.128 genes 0 gene
10 genes 8 species 0 species
UBERON:0000033801080
choroid plexus epithelium -1.0053.930 gene
1 gene 17 genes 0 species
1 species UBERON:0003911011701
tongue muscle 1.0081.161 gene 0 gene
17 genes 1 species 0 species
UBERON:0000378101710
trigeminal ganglion 1.0058.081 gene 0 gene
17 genes 1 species 0 species
UBERON:0001675101710
forebrain 1.0066.8814 genes 0 gene
4 genes 14 species 0 species
UBERON:00018901404140
vertebral column -1.0046.040 gene
1 gene 17 genes 0 species
1 species UBERON:0001130011701
caecum 1.0086.522 genes 0 gene
16 genes 2 species 0 species
UBERON:0001153201620
heart left ventricle, primary heart field 0.5081.763 genes 1 gene 14 genes 3 species 1 species UBERON:0002084, UBERON:0004140311431
olfactory bulb 1.0065.732 genes 0 gene
16 genes 2 species 0 species
UBERON:0002264201620
lens of camera-type eye 1.0070.292 genes 0 gene
16 genes 2 species 0 species
UBERON:0000965201620
ear 1.0065.322 genes 0 gene
16 genes 2 species 0 species
UBERON:0001690201620
brain 1.0081.6718 genes 0 gene
0 gene
18 species 0 species
UBERON:00009551800180
smooth muscle tissue 1.0086.743 genes 0 gene
15 genes 3 species 0 species
UBERON:0001135301530
heart right ventricle 0.0059.551 gene 1 gene 16 genes 1 species 1 species UBERON:0002080111611
lip 1.0081.811 gene 0 gene
17 genes 1 species 0 species
UBERON:0001833101710
female gonad 1.0088.0211 genes 0 gene
7 genes 11 species 0 species
UBERON:00009921107110
ileum 0.5085.793 genes 1 gene 14 genes 3 species 1 species UBERON:0002116311431
mitral valve 1.0057.241 gene 0 gene
17 genes 1 species 0 species
UBERON:0002135101710
cartilage tissue 1.0062.812 genes 0 gene
16 genes 2 species 0 species
UBERON:0002418201620
blastopore, primitive streak 1.0062.031 gene 0 gene
17 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101710
thyroid gland 1.0086.694 genes 0 gene
14 genes 4 species 0 species
UBERON:0002046401440
adenohypophysis 1.0086.783 genes 0 gene
15 genes 3 species 0 species
UBERON:0002196301530
choroid plexus of fourth ventricle -1.0047.680 gene
1 gene 17 genes 0 species
1 species UBERON:0002290011701
larva 1.0045.621 gene 0 gene
17 genes 1 species 0 species
UBERON:0002548101710
bone element 1.0065.997 genes 0 gene
11 genes 7 species 0 species
UBERON:0001474701170
cerebellum 1.0087.5113 genes 0 gene
5 genes 13 species 0 species
UBERON:00020371305130
fundus of stomach 1.0086.821 gene 0 gene
17 genes 1 species 0 species
UBERON:0001160101710
pineal body 1.0078.351 gene 0 gene
17 genes 1 species 0 species
UBERON:0001905101710
dermis 1.0066.481 gene 0 gene
17 genes 1 species 0 species
UBERON:0002067101710
cardiac ventricle 0.5063.003 genes 1 gene 14 genes 3 species 1 species UBERON:0002082311431
outflow tract 1.0064.482 genes 0 gene
16 genes 2 species 0 species
UBERON:0004145201620
saccule of membranous labyrinth 1.0067.031 gene 0 gene
17 genes 1 species 0 species
UBERON:0001854101710
camera-type eye 1.0057.426 genes 0 gene
12 genes 6 species 0 species
UBERON:0000019601260
caudal tuberculum, substantia nigra 1.0086.902 genes 0 gene
16 genes 2 species 0 species
UBERON:2000633, UBERON:0002038201620
choroid plexus 1.0083.801 gene 0 gene
17 genes 1 species 0 species
UBERON:0001886101710
thymus 1.0081.194 genes 0 gene
14 genes 4 species 0 species
UBERON:0002370401440
forelimb, pectoral fin 1.0068.154 genes 0 gene
14 genes 4 species 0 species
UBERON:0002102, UBERON:0000151401440
motor neuron -1.0060.430 gene
1 gene 17 genes 0 species
1 species CL:0000100011701
epithelium of lens 1.0060.221 gene 0 gene
17 genes 1 species 0 species
UBERON:0001803101710
right cardiac atrium 1.0055.312 genes 0 gene
16 genes 2 species 0 species
UBERON:0002078201620
internal carotid artery -1.0058.700 gene
1 gene 17 genes 0 species
1 species UBERON:0001532011701
1st arch mandibular component 1.0064.151 gene 0 gene
17 genes 1 species 0 species
UBERON:0007237101710
Ammon's horn 1.0087.884 genes 0 gene
14 genes 4 species 0 species
UBERON:0001954401440
epiblast (generic) 1.0076.611 gene 0 gene
17 genes 1 species 0 species
UBERON:0002532101710
adrenal cortex 1.0075.322 genes 0 gene
16 genes 2 species 0 species
UBERON:0001235201620
sternocleidomastoid -1.0053.760 gene
1 gene 17 genes 0 species
1 species UBERON:0001128011701
brainstem 1.0058.283 genes 0 gene
15 genes 3 species 0 species
UBERON:0002298301530
aorta 1.0084.794 genes 0 gene
14 genes 4 species 0 species
UBERON:0000947401440
right kidney 1.0077.461 gene 0 gene
17 genes 1 species 0 species
UBERON:0004539101710
somite 1.0064.392 genes 0 gene
16 genes 2 species 0 species
UBERON:0002329201620
retina 1.0090.705 genes 0 gene
13 genes 5 species 0 species
UBERON:0000966501350
intestine 1.0085.078 genes 0 gene
10 genes 8 species 0 species
UBERON:0000160801080
esophagus 1.0085.064 genes 0 gene
14 genes 4 species 0 species
UBERON:0001043401440
blastula 1.0085.424 genes 0 gene
14 genes 4 species 0 species
UBERON:0000307401440
right testis 1.0090.121 gene 0 gene
17 genes 1 species 0 species
UBERON:0004534101710
blood 1.0085.118 genes 0 gene
10 genes 8 species 0 species
UBERON:0000178801080
adipose tissue 1.0082.705 genes 0 gene
13 genes 5 species 0 species
UBERON:0001013501350
embryonic head 1.0055.463 genes 0 gene
15 genes 3 species 0 species
UBERON:0008816301530
skeletal muscle tissue 0.8284.2510 genes 1 gene 7 genes 10 species 1 species UBERON:00011341017101
spleen 1.0090.0210 genes 0 gene
8 genes 10 species 0 species
UBERON:00021061008100
kidney 1.0083.8818 genes 0 gene
0 gene
18 species 0 species
UBERON:00021131800180
intestinal epithelium -1.0041.670 gene
1 gene 17 genes 0 species
1 species UBERON:0001277011701
lung, swim bladder 0.8383.8911 genes 1 gene 6 genes 11 species 1 species UBERON:0002048, UBERON:00068601116111
cardiac atrium 1.0079.264 genes 0 gene
14 genes 4 species 0 species
UBERON:0002081401440
ventral horn of spinal cord 1.0060.651 gene 0 gene
17 genes 1 species 0 species
UBERON:0002257101710
islet of Langerhans 1.0082.042 genes 0 gene
16 genes 2 species 0 species
UBERON:0000006201620
neural tube 1.0082.272 genes 0 gene
16 genes 2 species 0 species
UBERON:0001049201620
endocardial cushion 1.0069.711 gene 0 gene
17 genes 1 species 0 species
UBERON:0002062101710
cerebral hemisphere 1.0061.0014 genes 0 gene
4 genes 14 species 0 species
UBERON:00018691404140
skeletal joint 1.0054.402 genes 0 gene
16 genes 2 species 0 species
UBERON:0000982201620
pigmented layer of retina -1.0055.550 gene
1 gene 17 genes 0 species
1 species UBERON:0001782011701
1st arch maxillary component 1.0064.221 gene 0 gene
17 genes 1 species 0 species
UBERON:0007238101710
cerebellar cortex 1.0091.434 genes 0 gene
14 genes 4 species 0 species
UBERON:0002129401440
heart 0.8780.9614 genes 1 gene 3 genes 14 species 1 species UBERON:00009481413141
liver 1.0077.4318 genes 0 gene
0 gene
18 species 0 species
UBERON:00021071800180
ileal epithelium -1.0058.810 gene
1 gene 17 genes 0 species
1 species UBERON:0008345011701
colon 0.7583.217 genes 1 gene 10 genes 7 species 1 species UBERON:0001155711071
left testis 1.0090.401 gene 0 gene
17 genes 1 species 0 species
UBERON:0004533101710
muscle organ 1.0045.4113 genes 0 gene
5 genes 13 species 0 species
UBERON:00016301305130
striatum 1.0060.822 genes 0 gene
16 genes 2 species 0 species
UBERON:0002435201620
myocardium of ventricle 0.0039.701 gene 1 gene 16 genes 1 species 1 species UBERON:0001083111611
neurohypophysis 1.0085.172 genes 0 gene
16 genes 2 species 0 species
UBERON:0002198201620
presomitic mesoderm 1.0061.692 genes 0 gene
16 genes 2 species 0 species
UBERON:0003059201620
olfactory epithelium 1.0063.521 gene 0 gene
17 genes 1 species 0 species
UBERON:0001997101710
dorsal root ganglion 1.0062.541 gene 0 gene
17 genes 1 species 0 species
UBERON:0000044101710
aortic valve 1.0088.691 gene 0 gene
17 genes 1 species 0 species
UBERON:0002137101710
ciliary body -1.0055.060 gene
1 gene 17 genes 0 species
1 species UBERON:0001775011701
ear vesicle 1.0069.101 gene 0 gene
17 genes 1 species 0 species
UBERON:0003051101710
gall bladder 1.0083.122 genes 0 gene
16 genes 2 species 0 species
UBERON:0002110201620
atrioventricular valve 1.0065.232 genes 0 gene
16 genes 2 species 0 species
UBERON:0002133201620
parathyroid gland, pharyngeal gill 1.0057.161 gene 0 gene
17 genes 1 species 0 species
UBERON:0001132, UBERON:0000206101710
zygote 1.0080.851 gene 0 gene
17 genes 1 species 0 species
CL:0000365101710
medulla oblongata 1.0053.711 gene 0 gene
17 genes 1 species 0 species
UBERON:0001896101710
caudate nucleus 1.0088.241 gene 0 gene
17 genes 1 species 0 species
UBERON:0001873101710
embryo 1.0086.079 genes 0 gene
9 genes 9 species 0 species
UBERON:000092290990
left ovary 1.0088.281 gene 0 gene
17 genes 1 species 0 species
UBERON:0002119101710

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