We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0072.531 gene 0 gene
16 genes 1 species 0 species
UBERON:0002206101610
vestibulocochlear ganglion 1.0059.351 gene 0 gene
16 genes 1 species 0 species
UBERON:0002827101610
optic fissure 1.0054.151 gene 0 gene
16 genes 1 species 0 species
UBERON:0005412101610
epithelial cell of pancreas -1.0069.790 gene
1 gene 16 genes 0 species
1 species CL:0000083011601
semi-lunar valve -1.0037.770 gene
1 gene 16 genes 0 species
1 species UBERON:0005623011601
brain blood vessel 1.0044.511 gene 0 gene
16 genes 1 species 0 species
UBERON:0003499101610
hypothalamus 1.0084.156 genes 0 gene
11 genes 6 species 0 species
UBERON:0001898601160
paraxial mesoderm 1.0044.811 gene 0 gene
16 genes 1 species 0 species
UBERON:0003077101610
gingival epithelium -1.0046.530 gene
1 gene 16 genes 0 species
1 species UBERON:0001949011601
gastrula 1.0043.083 genes 0 gene
14 genes 3 species 0 species
UBERON:0004734301430
cleaving embryo -1.0048.170 gene
2 genes 15 genes 0 species
2 species UBERON:0007010021502
midbrain 1.0072.203 genes 0 gene
14 genes 3 species 0 species
UBERON:0001891301430
retinal neural layer 1.0080.372 genes 0 gene
15 genes 2 species 0 species
UBERON:0003902201520
cornea 1.0044.661 gene 0 gene
16 genes 1 species 0 species
UBERON:0000964101610
hindbrain 1.0073.8214 genes 0 gene
3 genes 14 species 0 species
UBERON:00020281403140
inner nuclear layer of retina 1.0052.051 gene 0 gene
16 genes 1 species 0 species
UBERON:0001791101610
stomach 0.6751.795 genes 1 gene 11 genes 5 species 1 species UBERON:0000945511151
pituitary gland 0.7153.086 genes 1 gene 10 genes 6 species 1 species UBERON:0000007611061
inferior vagus X ganglion 1.0063.111 gene 0 gene
16 genes 1 species 0 species
UBERON:0005363101610
female reproductive system 1.0059.7312 genes 0 gene
5 genes 12 species 0 species
UBERON:00004741205120
kidney epithelium 0.0075.871 gene 1 gene 15 genes 1 species 1 species UBERON:0004819111511
pancreas 0.5057.023 genes 1 gene 13 genes 3 species 1 species UBERON:0001264311331
upper leg skin -1.0054.850 gene
1 gene 16 genes 0 species
1 species UBERON:0004262011601
extra-ocular muscle 1.0050.961 gene 0 gene
16 genes 1 species 0 species
UBERON:0001601101610
midbrain-hindbrain boundary 1.0072.411 gene 0 gene
16 genes 1 species 0 species
UBERON:0003052101610
limb, paired fin 1.0066.517 genes 0 gene
10 genes 7 species 0 species
UBERON:0002101, UBERON:0002534701070
manus, pectoral fin radial bone -1.0064.320 gene
1 gene 16 genes 0 species
1 species UBERON:0002398, UBERON:2001586011601
putamen 1.0082.511 gene 0 gene
16 genes 1 species 0 species
UBERON:0001874101610
telencephalon 1.0069.5614 genes 0 gene
3 genes 14 species 0 species
UBERON:00018931403140
utricle of membranous labyrinth -1.0053.780 gene
1 gene 16 genes 0 species
1 species UBERON:0001853011601
eyeball of camera-type eye 1.0074.456 genes 0 gene
11 genes 6 species 0 species
UBERON:0010230601160
right ovary 1.0052.091 gene 0 gene
16 genes 1 species 0 species
UBERON:0002118101610
testis -0.1849.377 genes 10 genes 0 gene
7 species 10 species UBERON:00004737100710
male reproductive system 1.0051.407 genes 0 gene
10 genes 7 species 0 species
UBERON:0000079701070
autopod skin -1.007.220 gene
1 gene 16 genes 0 species
1 species UBERON:0015790011601
multi-cellular organism 1.0059.0217 genes 0 gene
0 gene
17 species 0 species
UBERON:00004681700170
ventricular zone 1.0090.853 genes 0 gene
14 genes 3 species 0 species
UBERON:0003053301430
skin epidermis 0.0038.631 gene 1 gene 15 genes 1 species 1 species UBERON:0001003111511
embryonic post-anal tail 1.0073.591 gene 0 gene
16 genes 1 species 0 species
UBERON:0007144101610
central nervous system 1.0069.4417 genes 0 gene
0 gene
17 species 0 species
UBERON:00010171700170
fibroblast 0.5068.873 genes 1 gene 13 genes 3 species 1 species CL:0000057311331
mesonephros 1.0022.662 genes 0 gene
15 genes 2 species 0 species
UBERON:0000080201520
iris 1.0064.251 gene 0 gene
16 genes 1 species 0 species
UBERON:0001769101610
head 1.0068.957 genes 0 gene
10 genes 7 species 0 species
UBERON:0000033701070
choroid plexus epithelium 1.0059.151 gene 0 gene
16 genes 1 species 0 species
UBERON:0003911101610
tongue muscle 1.0042.211 gene 0 gene
16 genes 1 species 0 species
UBERON:0000378101610
geniculate ganglion 1.0066.651 gene 0 gene
16 genes 1 species 0 species
UBERON:0001700101610
trigeminal ganglion 1.0092.702 genes 0 gene
15 genes 2 species 0 species
UBERON:0001675201520
forebrain 1.0066.7414 genes 0 gene
3 genes 14 species 0 species
UBERON:00018901403140
vertebral column -1.0046.040 gene
1 gene 16 genes 0 species
1 species UBERON:0001130011601
caecum 0.3359.142 genes 1 gene 14 genes 2 species 1 species UBERON:0001153211421
diencephalon 1.0076.296 genes 0 gene
11 genes 6 species 0 species
UBERON:0001894601160
olfactory bulb 1.0088.423 genes 0 gene
14 genes 3 species 0 species
UBERON:0002264301430
heart left ventricle, primary heart field 0.0060.332 genes 2 genes 13 genes 2 species 2 species UBERON:0002084, UBERON:0004140221322
lens of camera-type eye 1.0062.771 gene 0 gene
16 genes 1 species 0 species
UBERON:0000965101610
ear 1.0047.801 gene 0 gene
16 genes 1 species 0 species
UBERON:0001690101610
brain 1.0081.6317 genes 0 gene
0 gene
17 species 0 species
UBERON:00009551700170
collection of basal ganglia 1.0072.213 genes 0 gene
14 genes 3 species 0 species
UBERON:0010011301430
smooth muscle tissue 0.0063.712 genes 2 genes 13 genes 2 species 2 species UBERON:0001135221322
upper arm skin 1.0076.201 gene 0 gene
16 genes 1 species 0 species
UBERON:0004263101610
heart right ventricle 0.0059.191 gene 1 gene 15 genes 1 species 1 species UBERON:0002080111511
lip 1.0041.961 gene 0 gene
16 genes 1 species 0 species
UBERON:0001833101610
ganglionic layer of retina 1.0058.891 gene 0 gene
16 genes 1 species 0 species
UBERON:0001792101610
skin of hip 1.0050.591 gene 0 gene
16 genes 1 species 0 species
UBERON:0001554101610
female gonad 0.6468.289 genes 2 genes 6 genes 9 species 2 species UBERON:000099292692
spinal nerve 1.0070.001 gene 0 gene
16 genes 1 species 0 species
UBERON:0001780101610
ileum 0.2045.923 genes 2 genes 12 genes 3 species 2 species UBERON:0002116321232
mitral valve 1.0040.641 gene 0 gene
16 genes 1 species 0 species
UBERON:0002135101610
cartilage tissue 0.3343.192 genes 1 gene 14 genes 2 species 1 species UBERON:0002418211421
blastopore, primitive streak -1.0040.630 gene
1 gene 16 genes 0 species
1 species UBERON:0000100, UBERON:0004341011601
thyroid gland 0.3357.822 genes 1 gene 14 genes 2 species 1 species UBERON:0002046211421
adenohypophysis 1.0050.663 genes 0 gene
14 genes 3 species 0 species
UBERON:0002196301430
midbrain tegmentum 1.0051.523 genes 0 gene
14 genes 3 species 0 species
UBERON:0001943301430
larva 1.0055.991 gene 0 gene
16 genes 1 species 0 species
UBERON:0002548101610
bone element 1.0045.074 genes 0 gene
13 genes 4 species 0 species
UBERON:0001474401340
trigeminal nerve 1.0071.421 gene 0 gene
16 genes 1 species 0 species
UBERON:0001645101610
cerebellum 1.0084.0613 genes 0 gene
4 genes 13 species 0 species
UBERON:00020371304130
fundus of stomach 1.0059.251 gene 0 gene
16 genes 1 species 0 species
UBERON:0001160101610
pineal body 0.0067.361 gene 1 gene 15 genes 1 species 1 species UBERON:0001905111511
dermis 1.0051.801 gene 0 gene
16 genes 1 species 0 species
UBERON:0002067101610
cardiac ventricle 0.5059.433 genes 1 gene 13 genes 3 species 1 species UBERON:0002082311331
outflow tract 0.0054.241 gene 1 gene 15 genes 1 species 1 species UBERON:0004145111511
camera-type eye 1.0058.346 genes 0 gene
11 genes 6 species 0 species
UBERON:0000019601160
caudal tuberculum, substantia nigra 1.0084.132 genes 0 gene
15 genes 2 species 0 species
UBERON:2000633, UBERON:0002038201520
choroid plexus 0.0065.081 gene 1 gene 15 genes 1 species 1 species UBERON:0001886111511
thymus -0.2052.282 genes 3 genes 12 genes 2 species 3 species UBERON:0002370231223
tendon 1.0043.761 gene 0 gene
16 genes 1 species 0 species
UBERON:0000043101610
epithelium of lens 1.0039.681 gene 0 gene
16 genes 1 species 0 species
UBERON:0001803101610
right cardiac atrium 1.0043.682 genes 0 gene
15 genes 2 species 0 species
UBERON:0002078201520
internal carotid artery -1.0040.890 gene
1 gene 16 genes 0 species
1 species UBERON:0001532011601
1st arch mandibular component -1.0041.150 gene
1 gene 16 genes 0 species
1 species UBERON:0007237011601
endocardial endothelium -1.0020.950 gene
1 gene 16 genes 0 species
1 species UBERON:0005316011601
Ammon's horn 1.0077.864 genes 0 gene
13 genes 4 species 0 species
UBERON:0001954401340
epiblast (generic) 1.0055.351 gene 0 gene
16 genes 1 species 0 species
UBERON:0002532101610
adrenal cortex 1.0059.832 genes 0 gene
15 genes 2 species 0 species
UBERON:0001235201520
glossopharyngeal ganglion 1.0063.621 gene 0 gene
16 genes 1 species 0 species
UBERON:0001701101610
sternocleidomastoid -1.0048.550 gene
1 gene 16 genes 0 species
1 species UBERON:0001128011601
brainstem 1.0073.826 genes 0 gene
11 genes 6 species 0 species
UBERON:0002298601160
aorta 0.5059.843 genes 1 gene 13 genes 3 species 1 species UBERON:0000947311331
right kidney -1.0015.290 gene
1 gene 16 genes 0 species
1 species UBERON:0004539011601
somite -1.0044.750 gene
1 gene 16 genes 0 species
1 species UBERON:0002329011601
retina 1.0088.895 genes 0 gene
12 genes 5 species 0 species
UBERON:0000966501250
intestine 0.7163.336 genes 1 gene 10 genes 6 species 1 species UBERON:0000160611061
esophagus 1.0058.474 genes 0 gene
13 genes 4 species 0 species
UBERON:0001043401340
myocardium 0.0061.281 gene 1 gene 15 genes 1 species 1 species UBERON:0002349111511
blastula 0.0031.421 gene 1 gene 15 genes 1 species 1 species UBERON:0000307111511
right testis -1.0026.050 gene
1 gene 16 genes 0 species
1 species UBERON:0004534011601
blood -0.7147.581 gene 6 genes 10 genes 1 species 6 species UBERON:0000178161016
adipose tissue 1.0055.896 genes 0 gene
11 genes 6 species 0 species
UBERON:0001013601160
embryonic head 1.0073.412 genes 0 gene
15 genes 2 species 0 species
UBERON:0008816201520
skeletal muscle tissue -0.4567.363 genes 8 genes 6 genes 3 species 8 species UBERON:000113438638
spleen 0.2776.567 genes 4 genes 6 genes 7 species 4 species UBERON:000210674674
kidney 0.8856.1416 genes 1 gene 0 gene
16 species 1 species UBERON:00021131610161
pericardium -1.0059.950 gene
1 gene 16 genes 0 species
1 species UBERON:0002407011601
lung, swim bladder 0.4578.178 genes 3 genes 6 genes 8 species 3 species UBERON:0002048, UBERON:000686083683
cardiac atrium 0.5059.723 genes 1 gene 13 genes 3 species 1 species UBERON:0002081311331
ventral horn of spinal cord 1.0069.681 gene 0 gene
16 genes 1 species 0 species
UBERON:0002257101610
islet of Langerhans 1.0058.012 genes 0 gene
15 genes 2 species 0 species
UBERON:0000006201520
neural tube 1.0079.033 genes 0 gene
14 genes 3 species 0 species
UBERON:0001049301430
endocardial cushion -1.0039.650 gene
1 gene 16 genes 0 species
1 species UBERON:0002062011601
cerebral hemisphere 1.0069.4114 genes 0 gene
3 genes 14 species 0 species
UBERON:00018691403140
pigmented layer of retina 1.0054.002 genes 0 gene
15 genes 2 species 0 species
UBERON:0001782201520
1st arch maxillary component 1.0041.061 gene 0 gene
16 genes 1 species 0 species
UBERON:0007238101610
vagus X ganglion 1.0059.072 genes 0 gene
15 genes 2 species 0 species
UBERON:0005362201520
cerebellar cortex 1.0078.104 genes 0 gene
13 genes 4 species 0 species
UBERON:0002129401340
heart 0.7364.9013 genes 2 genes 2 genes 13 species 2 species UBERON:00009481322132
liver -0.0656.318 genes 9 genes 0 gene
8 species 9 species UBERON:000210789089
colon 0.1159.975 genes 4 genes 8 genes 5 species 4 species UBERON:000115554854
left testis -1.0026.410 gene
1 gene 16 genes 0 species
1 species UBERON:0004533011601
muscle organ 1.0037.4410 genes 0 gene
7 genes 10 species 0 species
UBERON:00016301007100
striatum 1.0073.532 genes 0 gene
15 genes 2 species 0 species
UBERON:0002435201520
myocardium of ventricle 0.0055.491 gene 1 gene 15 genes 1 species 1 species UBERON:0001083111511
neurohypophysis 1.0058.342 genes 0 gene
15 genes 2 species 0 species
UBERON:0002198201520
presomitic mesoderm 0.0044.011 gene 1 gene 15 genes 1 species 1 species UBERON:0003059111511
olfactory epithelium -1.0038.600 gene
1 gene 16 genes 0 species
1 species UBERON:0001997011601
meninx -1.0057.880 gene
1 gene 16 genes 0 species
1 species UBERON:0002360011601
dorsal root ganglion 1.0064.802 genes 0 gene
15 genes 2 species 0 species
UBERON:0000044201520
aortic valve -1.0042.310 gene
1 gene 16 genes 0 species
1 species UBERON:0002137011601
ciliary body 1.0063.921 gene 0 gene
16 genes 1 species 0 species
UBERON:0001775101610
ear vesicle -1.0039.800 gene
1 gene 16 genes 0 species
1 species UBERON:0003051011601
gall bladder 1.0056.522 genes 0 gene
15 genes 2 species 0 species
UBERON:0002110201520
atrioventricular valve 0.0039.641 gene 1 gene 15 genes 1 species 1 species UBERON:0002133111511
parathyroid gland, pharyngeal gill -1.0013.760 gene
1 gene 16 genes 0 species
1 species UBERON:0001132, UBERON:0000206011601
gingiva -1.0055.960 gene
1 gene 16 genes 0 species
1 species UBERON:0001828011601
peritoneum 1.0059.401 gene 0 gene
16 genes 1 species 0 species
UBERON:0002358101610
zygote -1.0034.930 gene
1 gene 16 genes 0 species
1 species CL:0000365011601
medulla oblongata 1.0067.554 genes 0 gene
13 genes 4 species 0 species
UBERON:0001896401340
pylorus -1.0059.150 gene
1 gene 16 genes 0 species
1 species UBERON:0001166011601
caudate nucleus 1.0084.201 gene 0 gene
16 genes 1 species 0 species
UBERON:0001873101610
embryo 1.0073.028 genes 0 gene
9 genes 8 species 0 species
UBERON:000092280980
rhombomere 1.0052.441 gene 0 gene
16 genes 1 species 0 species
UBERON:0001892101610
left ovary 1.0049.681 gene 0 gene
16 genes 1 species 0 species
UBERON:0002119101610

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