We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0057.671 gene 0 gene
16 genes 1 species 0 species
UBERON:0002206101610
chordate pharynx 1.0057.881 gene 0 gene
16 genes 1 species 0 species
UBERON:0001042101610
optic fissure 1.0040.621 gene 0 gene
16 genes 1 species 0 species
UBERON:0005412101610
future diencephalon 1.0070.812 genes 0 gene
15 genes 2 species 0 species
UBERON:0006222201520
postcranial axial skeleton 1.0058.711 gene 0 gene
16 genes 1 species 0 species
UBERON:0002090101610
epithelial cell of pancreas 1.0056.061 gene 0 gene
16 genes 1 species 0 species
CL:0000083101610
semi-lunar valve 1.0037.771 gene 0 gene
16 genes 1 species 0 species
UBERON:0005623101610
brain blood vessel -1.0039.180 gene
1 gene 16 genes 0 species
1 species UBERON:0003499011601
hindlimb, pelvic fin 1.0061.642 genes 0 gene
15 genes 2 species 0 species
UBERON:0002103, UBERON:0000152201520
hypothalamus 0.7588.887 genes 1 gene 9 genes 6 species 1 species UBERON:000189871961
paraxial mesoderm -1.0044.810 gene
1 gene 16 genes 0 species
1 species UBERON:0003077011601
nervous system 1.0061.0912 genes 0 gene
5 genes 11 species 0 species
UBERON:00010161205110
gingival epithelium -1.0042.370 gene
1 gene 16 genes 0 species
1 species UBERON:0001949011601
gastrula 0.5057.883 genes 1 gene 13 genes 3 species 1 species UBERON:0004734311331
otic placode -1.0047.580 gene
1 gene 16 genes 0 species
1 species UBERON:0003069011601
cleaving embryo 0.0073.511 gene 1 gene 15 genes 1 species 1 species UBERON:0007010111511
neuron 1.0075.972 genes 0 gene
15 genes 1 species 0 species
CL:0000540201510
midbrain 1.0065.933 genes 0 gene
14 genes 3 species 0 species
UBERON:0001891301430
retinal neural layer -1.0027.410 gene
1 gene 16 genes 0 species
1 species UBERON:0003902011601
cornea -1.0038.570 gene
1 gene 16 genes 0 species
1 species UBERON:0000964011601
hindbrain 1.0092.116 genes 0 gene
11 genes 5 species 0 species
UBERON:0002028601150
third ventricle 1.0058.331 gene 0 gene
16 genes 1 species 0 species
UBERON:0002286101610
cranial nerve II -1.0059.980 gene
1 gene 16 genes 0 species
1 species UBERON:0000941011601
stomach -0.6028.281 gene 4 genes 12 genes 1 species 4 species UBERON:0000945141214
pituitary gland -0.1156.214 genes 5 genes 8 genes 3 species 5 species UBERON:000000745835
inferior vagus X ganglion -1.0041.560 gene
1 gene 16 genes 0 species
1 species UBERON:0005363011601
female reproductive system 1.0041.515 genes 0 gene
12 genes 4 species 0 species
UBERON:0000474501240
kidney epithelium -1.0056.090 gene
1 gene 16 genes 0 species
1 species UBERON:0004819011601
pancreas 0.0042.562 genes 2 genes 13 genes 2 species 2 species UBERON:0001264221322
upper leg skin -1.0046.340 gene
1 gene 16 genes 0 species
1 species UBERON:0004262011601
extra-ocular muscle 1.0062.831 gene 0 gene
16 genes 1 species 0 species
UBERON:0001601101610
optic stalk 1.0053.291 gene 0 gene
16 genes 1 species 0 species
UBERON:0003098101610
limb, paired fin 1.0023.692 genes 0 gene
15 genes 2 species 0 species
UBERON:0002101, UBERON:0002534201520
manus, pectoral fin radial bone -1.0054.430 gene
1 gene 16 genes 0 species
1 species UBERON:0002398, UBERON:2001586011601
face 1.0074.992 genes 0 gene
15 genes 2 species 0 species
UBERON:0001456201520
blood vessel 1.0064.571 gene 0 gene
16 genes 1 species 0 species
UBERON:0001981101610
putamen -1.0029.580 gene
1 gene 16 genes 0 species
1 species UBERON:0001874011601
telencephalon 1.0086.277 genes 0 gene
10 genes 6 species 0 species
UBERON:0001893701060
utricle of membranous labyrinth -1.0053.780 gene
1 gene 16 genes 0 species
1 species UBERON:0001853011601
eyeball of camera-type eye 0.3338.602 genes 1 gene 14 genes 2 species 1 species UBERON:0010230211421
right ovary -1.0018.300 gene
1 gene 16 genes 0 species
1 species UBERON:0002118011601
male reproductive system 1.0052.796 genes 0 gene
11 genes 5 species 0 species
UBERON:0000079601150
testis -0.1443.086 genes 8 genes 3 genes 5 species 8 species UBERON:000047368358
multi-cellular organism 1.0086.2414 genes 0 gene
3 genes 13 species 0 species
UBERON:00004681403130
ventricular zone 0.0040.781 gene 1 gene 15 genes 1 species 1 species UBERON:0003053111511
skin epidermis -1.0040.890 gene
1 gene 16 genes 0 species
1 species UBERON:0001003011601
pharyngeal arch 1.0051.542 genes 0 gene
15 genes 2 species 0 species
UBERON:0002539201520
embryonic post-anal tail 1.0018.031 gene 0 gene
16 genes 1 species 0 species
UBERON:0007144101610
peripheral nervous system 1.0065.371 gene 0 gene
16 genes 1 species 0 species
UBERON:0000010101610
central nervous system 1.0071.2012 genes 0 gene
5 genes 11 species 0 species
UBERON:00010171205110
fibroblast -1.0026.010 gene
2 genes 15 genes 0 species
2 species CL:0000057021502
mesonephros -1.004.840 gene
1 gene 16 genes 0 species
1 species UBERON:0000080011601
iris -1.0038.860 gene
1 gene 16 genes 0 species
1 species UBERON:0001769011601
head 1.0080.005 genes 0 gene
12 genes 4 species 0 species
UBERON:0000033501240
choroid plexus epithelium -1.0039.040 gene
1 gene 16 genes 0 species
1 species UBERON:0003911011601
tongue muscle -1.0012.560 gene
1 gene 16 genes 0 species
1 species UBERON:0000378011601
trigeminal ganglion 0.0044.431 gene 1 gene 15 genes 1 species 1 species UBERON:0001675111511
forebrain 1.0076.359 genes 0 gene
8 genes 8 species 0 species
UBERON:000189090880
vertebral column -1.0046.040 gene
1 gene 16 genes 0 species
1 species UBERON:0001130011601
caecum -1.0041.140 gene
3 genes 14 genes 0 species
3 species UBERON:0001153031403
diencephalon 1.0089.517 genes 0 gene
10 genes 6 species 0 species
UBERON:0001894701060
optic recess of third ventricle 1.0050.001 gene 0 gene
16 genes 1 species 0 species
UBERON:0002287101610
heart left ventricle, primary heart field -0.6056.221 gene 4 genes 12 genes 1 species 4 species UBERON:0002084, UBERON:0004140141214
olfactory bulb -1.0037.130 gene
2 genes 15 genes 0 species
2 species UBERON:0002264021502
lens of camera-type eye -1.0029.300 gene
1 gene 16 genes 0 species
1 species UBERON:0000965011601
ear 1.0063.961 gene 0 gene
16 genes 1 species 0 species
UBERON:0001690101610
brain 0.8584.3612 genes 1 gene 4 genes 11 species 1 species UBERON:00009551214111
collection of basal ganglia 1.0063.882 genes 0 gene
15 genes 2 species 0 species
UBERON:0010011201520
hematopoietic stem cell 1.0049.991 gene 0 gene
16 genes 1 species 0 species
CL:0000037101610
upper arm skin -1.0055.580 gene
1 gene 16 genes 0 species
1 species UBERON:0004263011601
smooth muscle tissue -1.0019.550 gene
2 genes 15 genes 0 species
2 species UBERON:0001135021502
heart right ventricle -1.0054.760 gene
3 genes 14 genes 0 species
3 species UBERON:0002080031403
lip -1.0012.270 gene
1 gene 16 genes 0 species
1 species UBERON:0001833011601
gonad 1.0061.527 genes 0 gene
10 genes 6 species 0 species
UBERON:0000991701060
skin of hip -1.0035.920 gene
1 gene 16 genes 0 species
1 species UBERON:0001554011601
female gonad -0.0956.355 genes 6 genes 6 genes 4 species 6 species UBERON:000099256646
internal ear 1.0085.991 gene 0 gene
16 genes 1 species 0 species
UBERON:0001846101610
ileum -0.6036.651 gene 4 genes 12 genes 1 species 4 species UBERON:0002116141214
mitral valve -1.0018.460 gene
1 gene 16 genes 0 species
1 species UBERON:0002135011601
olfactory lobe 1.0057.982 genes 0 gene
15 genes 2 species 0 species
UBERON:0005366201520
cartilage tissue -1.0042.720 gene
2 genes 15 genes 0 species
2 species UBERON:0002418021502
blastopore, primitive streak -1.0040.630 gene
1 gene 16 genes 0 species
1 species UBERON:0000100, UBERON:0004341011601
thyroid gland -1.0076.180 gene
5 genes 12 genes 0 species
5 species UBERON:0002046051205
adenohypophysis -1.0024.270 gene
2 genes 15 genes 0 species
2 species UBERON:0002196021502
midbrain tegmentum 1.0067.381 gene 0 gene
16 genes 1 species 0 species
UBERON:0001943101610
choroid plexus of fourth ventricle -1.0061.180 gene
1 gene 16 genes 0 species
1 species UBERON:0002290011601
larva 1.0091.982 genes 0 gene
15 genes 1 species 0 species
UBERON:0002548201510
bone element 1.0045.073 genes 0 gene
14 genes 2 species 0 species
UBERON:0001474301420
cerebellum -0.4048.383 genes 7 genes 7 genes 3 species 7 species UBERON:000203737737
fundus of stomach -1.0029.080 gene
1 gene 16 genes 0 species
1 species UBERON:0001160011601
pineal body -1.0040.470 gene
1 gene 16 genes 0 species
1 species UBERON:0001905011601
dermis -1.0038.570 gene
1 gene 16 genes 0 species
1 species UBERON:0002067011601
cardiac ventricle -0.3349.751 gene 2 genes 14 genes 1 species 2 species UBERON:0002082121412
outflow tract 1.0059.911 gene 0 gene
16 genes 1 species 0 species
UBERON:0004145101610
saccule of membranous labyrinth -1.0047.220 gene
1 gene 16 genes 0 species
1 species UBERON:0001854011601
caudal tuberculum, substantia nigra 1.0093.334 genes 0 gene
13 genes 3 species 0 species
UBERON:2000633, UBERON:0002038401330
camera-type eye 1.0063.152 genes 0 gene
15 genes 2 species 0 species
UBERON:0000019201520
choroid plexus -1.0058.100 gene
2 genes 15 genes 0 species
2 species UBERON:0001886021502
thymus -0.6041.481 gene 4 genes 12 genes 1 species 4 species UBERON:0002370141214
forelimb, pectoral fin 1.0074.991 gene 0 gene
16 genes 1 species 0 species
UBERON:0002102, UBERON:0000151101610
tendon -1.0043.950 gene
1 gene 16 genes 0 species
1 species UBERON:0000043011601
olfactory cortex 1.0056.242 genes 0 gene
15 genes 2 species 0 species
UBERON:0002894201520
epithelium of lens -1.0039.680 gene
1 gene 16 genes 0 species
1 species UBERON:0001803011601
right cardiac atrium -1.008.440 gene
1 gene 16 genes 0 species
1 species UBERON:0002078011601
internal carotid artery -1.0040.890 gene
1 gene 16 genes 0 species
1 species UBERON:0001532011601
1st arch mandibular component -1.0041.150 gene
1 gene 16 genes 0 species
1 species UBERON:0007237011601
neural plate 1.0049.901 gene 0 gene
16 genes 1 species 0 species
UBERON:0003075101610
endocardial endothelium -1.0016.940 gene
1 gene 16 genes 0 species
1 species UBERON:0005316011601
calcareous tooth 1.0071.041 gene 0 gene
16 genes 1 species 0 species
UBERON:0001091101610
Ammon's horn 0.0046.062 genes 2 genes 13 genes 2 species 2 species UBERON:0001954221322
epiblast (generic) -1.0032.780 gene
1 gene 16 genes 0 species
1 species UBERON:0002532011601
adrenal cortex -1.0041.810 gene
2 genes 15 genes 0 species
2 species UBERON:0001235021502
sternocleidomastoid -1.0055.290 gene
1 gene 16 genes 0 species
1 species UBERON:0001128011601
brainstem 0.0056.792 genes 2 genes 13 genes 2 species 2 species UBERON:0002298221322
aorta -0.3341.771 gene 2 genes 14 genes 1 species 2 species UBERON:0000947121412
right kidney -1.0044.620 gene
1 gene 16 genes 0 species
1 species UBERON:0004539011601
retina -0.2047.092 genes 3 genes 12 genes 2 species 3 species UBERON:0000966231223
somite -1.0044.750 gene
1 gene 16 genes 0 species
1 species UBERON:0002329011601
intestine 0.0023.432 genes 2 genes 13 genes 2 species 1 species UBERON:0000160221321
esophagus -1.0028.720 gene
4 genes 13 genes 0 species
4 species UBERON:0001043041304
myocardium -1.0042.450 gene
1 gene 16 genes 0 species
1 species UBERON:0002349011601
blastula 0.6055.734 genes 1 gene 12 genes 4 species 1 species UBERON:0000307411241
right testis 1.0046.311 gene 0 gene
16 genes 1 species 0 species
UBERON:0004534101610
blood -0.1440.943 genes 4 genes 10 genes 3 species 4 species UBERON:0000178341034
adipose tissue 0.2041.533 genes 2 genes 12 genes 3 species 2 species UBERON:0001013321232
kidney blood vessel -1.0066.660 gene
1 gene 16 genes 0 species
1 species UBERON:0003517011601
embryonic head 1.0035.103 genes 0 gene
14 genes 3 species 0 species
UBERON:0008816301430
skeletal muscle tissue -0.3340.633 genes 6 genes 8 genes 3 species 6 species UBERON:000113436836
integumental system 1.0062.045 genes 0 gene
12 genes 4 species 0 species
UBERON:0002416501240
cardiovascular system 1.0062.045 genes 0 gene
12 genes 4 species 0 species
UBERON:0004535501240
spleen -0.6037.702 genes 8 genes 7 genes 2 species 7 species UBERON:000210628727
kidney -0.5641.092 genes 7 genes 8 genes 2 species 6 species UBERON:000211327826
pericardium 0.3341.832 genes 1 gene 14 genes 1 species 1 species UBERON:0002407211411
lung, swim bladder -0.2055.274 genes 6 genes 7 genes 4 species 6 species UBERON:0002048, UBERON:000686046746
cardiac atrium -0.3341.811 gene 2 genes 14 genes 1 species 2 species UBERON:0002081121412
ventral horn of spinal cord 1.0051.531 gene 0 gene
16 genes 1 species 0 species
UBERON:0002257101610
islet of Langerhans 0.0035.551 gene 1 gene 15 genes 1 species 1 species UBERON:0000006111511
neural tube 1.0084.142 genes 0 gene
15 genes 2 species 0 species
UBERON:0001049201520
endocardial cushion -1.0039.650 gene
1 gene 16 genes 0 species
1 species UBERON:0002062011601
cerebral hemisphere 1.0044.075 genes 0 gene
12 genes 5 species 0 species
UBERON:0001869501250
appendicular skeleton 1.0081.821 gene 0 gene
16 genes 1 species 0 species
UBERON:0002091101610
pigmented layer of retina -1.0040.590 gene
2 genes 15 genes 0 species
2 species UBERON:0001782021502
1st arch maxillary component -1.0041.060 gene
1 gene 16 genes 0 species
1 species UBERON:0007238011601
cerebellar cortex -0.3359.641 gene 2 genes 14 genes 1 species 2 species UBERON:0002129121412
cranial ganglion 1.0067.291 gene 0 gene
16 genes 1 species 0 species
UBERON:0001714101610
heart -0.3337.404 genes 8 genes 5 genes 3 species 8 species UBERON:000094848538
liver -0.4342.334 genes 10 genes 3 genes 4 species 10 species UBERON:00021074103410
cranium 1.0058.291 gene 0 gene
16 genes 1 species 0 species
UBERON:0003128101610
ileal epithelium -1.0059.600 gene
1 gene 16 genes 0 species
1 species UBERON:0008345011601
colon -0.7134.421 gene 6 genes 10 genes 1 species 6 species UBERON:0001155161016
left testis 1.0045.341 gene 0 gene
16 genes 1 species 0 species
UBERON:0004533101610
muscle organ 0.6738.365 genes 1 gene 11 genes 5 species 1 species UBERON:0001630511151
striatum 1.0044.772 genes 0 gene
15 genes 2 species 0 species
UBERON:0002435201520
myocardium of ventricle -1.0048.930 gene
1 gene 16 genes 0 species
1 species UBERON:0001083011601
optic vesicle 1.0052.991 gene 0 gene
16 genes 1 species 0 species
UBERON:0004128101610
neurohypophysis 0.0025.021 gene 1 gene 15 genes 1 species 1 species UBERON:0002198111511
presomitic mesoderm -1.0043.650 gene
2 genes 15 genes 0 species
2 species UBERON:0003059021502
olfactory epithelium 1.0043.801 gene 0 gene
16 genes 1 species 0 species
UBERON:0001997101610
meninx 1.0071.041 gene 0 gene
16 genes 1 species 0 species
UBERON:0002360101610
dorsal root ganglion 0.0042.611 gene 1 gene 15 genes 1 species 1 species UBERON:0000044111511
aortic valve 1.0042.311 gene 0 gene
16 genes 1 species 0 species
UBERON:0002137101610
ciliary body -1.0037.490 gene
1 gene 16 genes 0 species
1 species UBERON:0001775011601
ear vesicle -1.0045.560 gene
1 gene 16 genes 0 species
1 species UBERON:0003051011601
musculature 1.0065.385 genes 0 gene
12 genes 5 species 0 species
UBERON:0001015501250
gall bladder -1.0021.990 gene
2 genes 15 genes 0 species
2 species UBERON:0002110021502
atrioventricular valve -1.0039.640 gene
1 gene 16 genes 0 species
1 species UBERON:0002133011601
parathyroid gland, pharyngeal gill -1.0024.160 gene
2 genes 15 genes 0 species
1 species UBERON:0001132, UBERON:0000206021501
renal system 1.0078.062 genes 0 gene
15 genes 2 species 0 species
UBERON:0001008201520
gingiva -1.0039.270 gene
1 gene 16 genes 0 species
1 species UBERON:0001828011601
peritoneum -1.0041.410 gene
1 gene 16 genes 0 species
1 species UBERON:0002358011601
zygote 1.0051.331 gene 0 gene
16 genes 1 species 0 species
CL:0000365101610
respiratory system 1.0061.094 genes 0 gene
13 genes 4 species 0 species
UBERON:0001004401340
medulla oblongata 0.3363.802 genes 1 gene 14 genes 2 species 1 species UBERON:0001896211421
pylorus -1.0041.490 gene
1 gene 16 genes 0 species
1 species UBERON:0001166011601
caudate nucleus -1.0029.170 gene
1 gene 16 genes 0 species
1 species UBERON:0001873011601
embryo 1.0081.398 genes 0 gene
9 genes 7 species 0 species
UBERON:000092280970
rhombomere 1.0054.941 gene 0 gene
16 genes 1 species 0 species
UBERON:0001892101610
left ovary -1.0021.720 gene
1 gene 16 genes 0 species
1 species UBERON:0002119011601

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