We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
bronchus 0.0041.231 gene 1 gene 13 genes 1 species 1 species UBERON:0002185111311
infraspinatus muscle 1.0044.431 gene 0 gene
14 genes 1 species 0 species
UBERON:0001477101410
inferior olivary complex -1.0048.390 gene
1 gene 14 genes 0 species
1 species UBERON:0002127011401
epithelium of nasopharynx -1.0043.900 gene
1 gene 14 genes 0 species
1 species UBERON:0001951011401
autopod skin -1.0026.510 gene
1 gene 14 genes 0 species
1 species UBERON:0015790011401
hindbrain 1.0047.716 genes 0 gene
9 genes 6 species 0 species
UBERON:000202860960
epithelial cell of pancreas -1.0050.540 gene
1 gene 14 genes 0 species
1 species CL:0000083011401
parietal pleura -1.0041.400 gene
1 gene 14 genes 0 species
1 species UBERON:0002400011401
placenta 0.2053.713 genes 2 genes 10 genes 3 species 2 species UBERON:0001987321032
retinal neural layer 1.0096.841 gene 0 gene
14 genes 1 species 0 species
UBERON:0003902101410
gingival epithelium -1.0042.370 gene
1 gene 14 genes 0 species
1 species UBERON:0001949011401
cardiac ventricle 1.0047.132 genes 0 gene
13 genes 2 species 0 species
UBERON:0002082201320
laryngeal cartilage -1.0013.830 gene
1 gene 14 genes 0 species
1 species UBERON:0001739011401
lymph node 1.0057.174 genes 0 gene
11 genes 4 species 0 species
UBERON:0000029401140
urinary bladder 0.0050.142 genes 2 genes 11 genes 2 species 2 species UBERON:0001255221122
myometrium 1.0048.992 genes 0 gene
13 genes 2 species 0 species
UBERON:0001296201320
hypothalamus 1.0061.315 genes 0 gene
10 genes 5 species 0 species
UBERON:0001898501050
tongue 0.3343.332 genes 1 gene 12 genes 2 species 1 species UBERON:0001723211221
prostate gland 0.0044.831 gene 1 gene 13 genes 1 species 1 species UBERON:0002367111311
hair follicle 0.0050.241 gene 1 gene 13 genes 1 species 1 species UBERON:0002073111311
upper leg skin -1.0045.800 gene
1 gene 14 genes 0 species
1 species UBERON:0004262011401
limb 1.0044.006 genes 0 gene
9 genes 6 species 0 species
UBERON:000210160960
left lobe of thyroid gland -1.0043.650 gene
1 gene 14 genes 0 species
1 species UBERON:0001120011401
thyroid gland -0.5045.091 gene 3 genes 11 genes 1 species 3 species UBERON:0002046131113
kidney epithelium 0.0048.461 gene 1 gene 13 genes 1 species 1 species UBERON:0004819111311
pancreas 0.5060.173 genes 1 gene 11 genes 3 species 1 species UBERON:0001264311131
cardiac muscle of right atrium -1.0049.550 gene
1 gene 14 genes 0 species
1 species UBERON:0003379011401
metanephros cortex -1.0025.150 gene
1 gene 14 genes 0 species
1 species UBERON:0010533011401
substantia nigra 1.0049.111 gene 0 gene
14 genes 1 species 0 species
UBERON:0002038101410
female reproductive system 1.0041.517 genes 0 gene
8 genes 7 species 0 species
UBERON:000047470870
biceps brachii -1.0043.690 gene
1 gene 14 genes 0 species
1 species UBERON:0001507011401
epithelium of esophagus -1.0050.040 gene
1 gene 14 genes 0 species
1 species UBERON:0001976011401
heart right ventricle 0.0041.761 gene 1 gene 13 genes 1 species 1 species UBERON:0002080111311
stomach 1.0052.325 genes 0 gene
10 genes 5 species 0 species
UBERON:0000945501050
uterine cervix -1.0041.650 gene
3 genes 12 genes 0 species
3 species UBERON:0000002031203
eyeball of camera-type eye 1.0061.435 genes 0 gene
10 genes 5 species 0 species
UBERON:0010230501050
testis 0.3880.809 genes 4 genes 2 genes 9 species 4 species UBERON:000047394294
telencephalon 1.0047.3810 genes 0 gene
5 genes 10 species 0 species
UBERON:00018931005100
caecum 0.0045.741 gene 1 gene 13 genes 1 species 1 species UBERON:0001153111311
forebrain 1.0064.5211 genes 0 gene
4 genes 11 species 0 species
UBERON:00018901104110
right ovary -1.0050.450 gene
1 gene 14 genes 0 species
1 species UBERON:0002118011401
seminal vesicle -1.0040.740 gene
1 gene 14 genes 0 species
1 species UBERON:0000998011401
putamen -1.0046.560 gene
1 gene 14 genes 0 species
1 species UBERON:0001874011401
left cardiac atrium 1.0035.191 gene 0 gene
14 genes 1 species 0 species
UBERON:0002079101410
ventricular zone 0.0062.011 gene 1 gene 13 genes 1 species 1 species UBERON:0003053111311
pituitary gland 1.0046.525 genes 0 gene
10 genes 5 species 0 species
UBERON:0000007501050
mammary duct -1.0042.230 gene
1 gene 14 genes 0 species
1 species UBERON:0001765011401
cranial nerve II -1.0042.470 gene
1 gene 14 genes 0 species
1 species UBERON:0000941011401
lens of camera-type eye 1.0071.061 gene 0 gene
14 genes 1 species 0 species
UBERON:0000965101410
multi-cellular organism 1.0078.1914 genes 0 gene
1 gene 14 species 0 species
UBERON:00004681401140
choroid plexus epithelium 1.0054.101 gene 0 gene
14 genes 1 species 0 species
UBERON:0003911101410
oviduct epithelium 1.0083.122 genes 0 gene
13 genes 2 species 0 species
UBERON:0004804201320
parotid gland -1.0041.810 gene
1 gene 14 genes 0 species
1 species UBERON:0001831011401
brain 1.0047.7912 genes 0 gene
3 genes 12 species 0 species
UBERON:00009551203120
amniotic fluid -1.0042.600 gene
1 gene 14 genes 0 species
1 species UBERON:0000173011401
upper arm skin -1.0049.030 gene
1 gene 14 genes 0 species
1 species UBERON:0004263011401
cardiac atrium 0.3341.812 genes 1 gene 12 genes 2 species 1 species UBERON:0002081211221
trigeminal ganglion -1.0041.590 gene
1 gene 14 genes 0 species
1 species UBERON:0001675011401
cerebral cortex 1.0049.2810 genes 0 gene
5 genes 10 species 0 species
UBERON:00009561005100
head 1.0033.015 genes 0 gene
10 genes 5 species 0 species
UBERON:0000033501050
tongue muscle -1.0030.980 gene
1 gene 14 genes 0 species
1 species UBERON:0000378011401
vas deferens -1.0015.940 gene
1 gene 14 genes 0 species
1 species UBERON:0001000011401
heart left ventricle 0.3351.022 genes 1 gene 12 genes 2 species 1 species UBERON:0002084211221
jejunum 0.2055.983 genes 2 genes 10 genes 3 species 2 species UBERON:0002115321032
fundus of stomach 1.0049.031 gene 0 gene
14 genes 1 species 0 species
UBERON:0001160101410
adenohypophysis 0.0046.801 gene 1 gene 13 genes 1 species 1 species UBERON:0002196111311
lung 0.3349.916 genes 3 genes 6 genes 6 species 3 species UBERON:000204863663
ureter -1.0031.360 gene
1 gene 14 genes 0 species
1 species UBERON:0000056011401
inner nuclear layer of retina 1.0055.871 gene 0 gene
14 genes 1 species 0 species
UBERON:0001791101410
fibroblast 0.3357.192 genes 1 gene 12 genes 2 species 1 species CL:0000057211221
nasal cavity epithelium -1.0049.400 gene
1 gene 14 genes 0 species
1 species UBERON:0005384011401
mitral valve 1.0042.771 gene 0 gene
14 genes 1 species 0 species
UBERON:0002135101410
camera-type eye 1.0067.955 genes 0 gene
10 genes 5 species 0 species
UBERON:0000019501050
female gonad 0.0055.554 genes 4 genes 7 genes 4 species 4 species UBERON:000099244744
ileum 0.5056.023 genes 1 gene 11 genes 3 species 1 species UBERON:0002116311131
amygdala -1.0047.410 gene
1 gene 14 genes 0 species
1 species UBERON:0001876011401
choroid plexus 0.0023.421 gene 1 gene 13 genes 1 species 1 species UBERON:0001886111311
skin of hip -1.0051.720 gene
1 gene 14 genes 0 species
1 species UBERON:0001554011401
smooth muscle tissue 0.3356.322 genes 1 gene 12 genes 2 species 1 species UBERON:0001135211221
trophectoderm -1.0036.510 gene
1 gene 14 genes 0 species
1 species UBERON:0004345011401
undifferentiated genital tubercle 1.0059.661 gene 0 gene
14 genes 1 species 0 species
UBERON:0005876101410
neocortex 1.0042.5810 genes 0 gene
5 genes 10 species 0 species
UBERON:00019501005100
skeletal muscle tissue of rectus abdominis -1.0045.180 gene
1 gene 14 genes 0 species
1 species UBERON:0004511011401
uterus 0.7157.196 genes 1 gene 8 genes 6 species 1 species UBERON:000099561861
trachea -1.0042.920 gene
2 genes 13 genes 0 species
2 species UBERON:0003126021302
cartilage tissue 0.3344.902 genes 1 gene 12 genes 2 species 1 species UBERON:0002418211221
diaphragm 0.0048.241 gene 1 gene 13 genes 1 species 1 species UBERON:0001103111311
Ammon's horn 0.3349.652 genes 1 gene 12 genes 2 species 1 species UBERON:0001954211221
lip 1.0042.371 gene 0 gene
14 genes 1 species 0 species
UBERON:0001833101410
cerebellum 0.0958.046 genes 5 genes 4 genes 6 species 5 species UBERON:000203765465
penis -1.0041.580 gene
1 gene 14 genes 0 species
1 species UBERON:0000989011401
tendon of biceps brachii -1.0041.590 gene
1 gene 14 genes 0 species
1 species UBERON:0008188011401
coronary artery 1.0041.671 gene 0 gene
14 genes 1 species 0 species
UBERON:0001621101410
periodontal ligament -1.0047.950 gene
1 gene 14 genes 0 species
1 species UBERON:0008266011401
embryonic post-anal tail 1.0062.911 gene 0 gene
14 genes 1 species 0 species
UBERON:0007144101410
vertebral column -1.0046.040 gene
1 gene 14 genes 0 species
1 species UBERON:0001130011401
retina 1.0088.124 genes 0 gene
11 genes 4 species 0 species
UBERON:0000966401140
myocardium 0.0043.251 gene 1 gene 13 genes 1 species 1 species UBERON:0002349111311
mammary gland 1.0052.213 genes 0 gene
12 genes 3 species 0 species
UBERON:0001911301230
milk 1.0050.551 gene 0 gene
14 genes 1 species 0 species
UBERON:0001913101410
bone marrow 0.3367.054 genes 2 genes 9 genes 4 species 2 species UBERON:000237142942
heart 0.0953.796 genes 5 genes 4 genes 6 species 5 species UBERON:000094865465
aorta 0.3341.772 genes 1 gene 12 genes 2 species 1 species UBERON:0000947211221
right testis -1.0030.440 gene
1 gene 14 genes 0 species
1 species UBERON:0004534011401
urethra -1.0041.750 gene
2 genes 13 genes 0 species
2 species UBERON:0000057021302
quadriceps femoris 0.3359.652 genes 1 gene 12 genes 2 species 1 species UBERON:0001377211221
mammary gland fat -1.0029.700 gene
1 gene 14 genes 0 species
1 species UBERON:0004180011401
tendon 1.0044.761 gene 0 gene
14 genes 1 species 0 species
UBERON:0000043101410
epithelium of mammary gland 1.0048.191 gene 0 gene
14 genes 1 species 0 species
UBERON:0003244101410
outer nuclear layer of retina 1.0068.501 gene 0 gene
14 genes 1 species 0 species
UBERON:0001789101410
right kidney 1.0038.351 gene 0 gene
14 genes 1 species 0 species
UBERON:0004539101410
adrenal cortex 0.0041.811 gene 1 gene 13 genes 1 species 1 species UBERON:0001235111311
esophagus 0.0063.652 genes 2 genes 11 genes 2 species 2 species UBERON:0001043221122
pons -1.0041.460 gene
2 genes 13 genes 0 species
2 species UBERON:0000988021302
neural tube 1.0044.571 gene 0 gene
14 genes 1 species 0 species
UBERON:0001049101410
synovial membrane of synovial joint 1.0046.171 gene 0 gene
14 genes 1 species 0 species
UBERON:0002018101410
pineal body 1.0069.041 gene 0 gene
14 genes 1 species 0 species
UBERON:0001905101410
cervix epithelium -1.0049.290 gene
1 gene 14 genes 0 species
1 species UBERON:0004801011401
epiblast (generic) -1.0048.930 gene
1 gene 14 genes 0 species
1 species UBERON:0002532011401
male germ cell 0.5049.303 genes 1 gene 11 genes 3 species 1 species CL:0000015311131
globus pallidus -1.0054.570 gene
1 gene 14 genes 0 species
1 species UBERON:0001875011401
large intestine 1.0043.256 genes 0 gene
9 genes 6 species 0 species
UBERON:000005960960
pleura -1.0061.630 gene
1 gene 14 genes 0 species
1 species UBERON:0000977011401
spleen 0.5059.386 genes 2 genes 7 genes 6 species 2 species UBERON:000210662762
metanephros -1.0047.340 gene
1 gene 14 genes 0 species
1 species UBERON:0000081011401
kidney 0.6449.689 genes 2 genes 4 genes 9 species 2 species UBERON:000211392492
triceps brachii -0.3366.581 gene 2 genes 12 genes 1 species 2 species UBERON:0001509121212
embryonic head -1.0022.560 gene
1 gene 14 genes 0 species
1 species UBERON:0008816011401
blood 0.3356.324 genes 2 genes 9 genes 4 species 2 species UBERON:000017842942
skeletal muscle tissue -0.1153.624 genes 5 genes 6 genes 4 species 5 species UBERON:000113445645
gastrocnemius 1.0053.131 gene 0 gene
14 genes 1 species 0 species
UBERON:0001388101410
islet of Langerhans 1.0063.552 genes 0 gene
13 genes 2 species 0 species
UBERON:0000006201320
olfactory bulb 0.3354.062 genes 1 gene 12 genes 2 species 1 species UBERON:0002264211221
adipose tissue 0.6043.174 genes 1 gene 10 genes 4 species 1 species UBERON:0001013411041
epithelium of bronchus 0.0049.631 gene 1 gene 13 genes 1 species 1 species UBERON:0002031111311
brainstem 1.0055.091 gene 0 gene
14 genes 1 species 0 species
UBERON:0002298101410
vagina 1.0044.561 gene 0 gene
14 genes 1 species 0 species
UBERON:0000996101410
duodenum 0.0053.922 genes 2 genes 11 genes 2 species 2 species UBERON:0002114221122
thymus 1.0059.245 genes 0 gene
10 genes 5 species 0 species
UBERON:0002370501050
pericardium -1.0041.830 gene
1 gene 14 genes 0 species
1 species UBERON:0002407011401
dorsal plus ventral thalamus 1.0046.011 gene 0 gene
14 genes 1 species 0 species
UBERON:0001897101410
muscle organ 1.0066.727 genes 0 gene
8 genes 7 species 0 species
UBERON:000163070870
pigmented layer of retina 1.0062.841 gene 0 gene
14 genes 1 species 0 species
UBERON:0001782101410
liver 0.2974.209 genes 5 genes 1 gene 9 species 5 species UBERON:000210795195
gluteal muscle 0.3366.482 genes 1 gene 12 genes 2 species 1 species UBERON:0002000211221
striatum 1.0055.401 gene 0 gene
14 genes 1 species 0 species
UBERON:0002435101410
skin of leg -1.0044.730 gene
1 gene 14 genes 0 species
1 species UBERON:0001511011401
left testis -1.0030.330 gene
1 gene 14 genes 0 species
1 species UBERON:0004533011401
colon 0.7158.916 genes 1 gene 8 genes 6 species 1 species UBERON:000115561861
yolk sac -1.0044.080 gene
1 gene 14 genes 0 species
1 species UBERON:0001040011401
endometrium 1.0053.354 genes 0 gene
11 genes 4 species 0 species
UBERON:0001295401140
supraspinatus muscle -1.0015.740 gene
1 gene 14 genes 0 species
1 species UBERON:0002383011401
saliva-secreting gland -0.3351.851 gene 2 genes 12 genes 1 species 2 species UBERON:0001044121212
small intestine 1.0053.135 genes 0 gene
10 genes 5 species 0 species
UBERON:0002108501050
zygote 1.0062.141 gene 0 gene
14 genes 1 species 0 species
CL:0000365101410
peritoneum 1.0054.761 gene 0 gene
14 genes 1 species 0 species
UBERON:0002358101410
neurohypophysis -1.0030.560 gene
1 gene 14 genes 0 species
1 species UBERON:0002198011401
metanephric glomerulus -1.0048.020 gene
1 gene 14 genes 0 species
1 species UBERON:0004736011401
cerebellar cortex 0.0057.952 genes 2 genes 11 genes 2 species 2 species UBERON:0002129221122
gall bladder 0.0056.401 gene 1 gene 13 genes 1 species 1 species UBERON:0002110111311
inferior vagus X ganglion -1.0045.790 gene
1 gene 14 genes 0 species
1 species UBERON:0005363011401
bronchial epithelial cell -1.0042.790 gene
1 gene 14 genes 0 species
1 species CL:0002328011401
intestine 1.0057.526 genes 0 gene
9 genes 6 species 0 species
UBERON:000016060960
skeleton of lower jaw -1.0036.390 gene
1 gene 14 genes 0 species
1 species UBERON:0003278011401
skeletal muscle tissue of biceps brachii -1.0042.250 gene
1 gene 14 genes 0 species
1 species UBERON:0004502011401
embryo 0.3393.684 genes 2 genes 9 genes 4 species 2 species UBERON:000092242942
pylorus -1.0041.490 gene
1 gene 14 genes 0 species
1 species UBERON:0001166011401
left ovary 1.0049.041 gene 0 gene
14 genes 1 species 0 species
UBERON:0002119101410
midbrain 1.0048.142 genes 0 gene
13 genes 2 species 0 species
UBERON:0001891201320
dorsal root ganglion -1.0041.660 gene
1 gene 14 genes 0 species
1 species UBERON:0000044011401
right lobe of thyroid gland -1.0043.980 gene
1 gene 14 genes 0 species
1 species UBERON:0001119011401
visceral pleura -1.0041.190 gene
1 gene 14 genes 0 species
1 species UBERON:0002401011401
adrenal gland 0.6054.784 genes 1 gene 10 genes 4 species 1 species UBERON:0002369411041
caudate nucleus -1.0046.910 gene
1 gene 14 genes 0 species
1 species UBERON:0001873011401
medulla oblongata -1.0041.470 gene
1 gene 14 genes 0 species
1 species UBERON:0001896011401
gingiva -1.0050.370 gene
1 gene 14 genes 0 species
1 species UBERON:0001828011401
deltoid -1.0055.060 gene
1 gene 14 genes 0 species
1 species UBERON:0001476011401
intercostal muscle 1.0042.401 gene 0 gene
14 genes 1 species 0 species
UBERON:0001111101410
right cardiac atrium 1.0034.632 genes 0 gene
13 genes 2 species 0 species
UBERON:0002078201320

Do not show this banner again