We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
chordate pharynx -1.0057.880 gene
1 gene 3 genes 0 species
1 species UBERON:000104201301
hindbrain 1.0068.744 genes 0 gene
0 gene
3 species 0 species
UBERON:000202840030
hypothalamus 1.0075.073 genes 0 gene
1 gene 2 species 0 species
UBERON:000189830120
uterine cervix 1.0046.731 gene 0 gene
3 genes 1 species 0 species
UBERON:000000210310
neocortex 1.0058.314 genes 0 gene
0 gene
3 species 0 species
UBERON:000195040030
midbrain 1.0069.482 genes 0 gene
2 genes 1 species 0 species
UBERON:000189120210
ileum 1.0065.763 genes 0 gene
1 gene 2 species 0 species
UBERON:000211630120
retinal neural layer 1.0077.902 genes 0 gene
2 genes 1 species 0 species
UBERON:000390220210
thyroid gland 0.0076.181 gene 1 gene 2 genes 1 species 1 species UBERON:000204611211
musculature 1.0065.383 genes 0 gene
1 gene 2 species 0 species
UBERON:000101530120
limb 1.0068.703 genes 0 gene
1 gene 2 species 0 species
UBERON:000210130120
cornea -1.0074.990 gene
1 gene 3 genes 0 species
1 species UBERON:000096401301
urinary bladder 1.0069.692 genes 0 gene
2 genes 1 species 0 species
UBERON:000125520210
telencephalon 1.0064.324 genes 0 gene
0 gene
3 species 0 species
UBERON:000189340030
inner nuclear layer of retina 1.0067.641 gene 0 gene
3 genes 1 species 0 species
UBERON:000179110310
cranium -1.0053.530 gene
1 gene 3 genes 0 species
1 species UBERON:000312801301
pancreas 1.0076.373 genes 0 gene
1 gene 2 species 0 species
UBERON:000126430120
testis 1.0062.824 genes 0 gene
0 gene
3 species 0 species
UBERON:000047340030
pituitary gland 0.0078.321 gene 1 gene 2 genes 1 species 1 species UBERON:000000711211
face 1.0060.702 genes 0 gene
2 genes 1 species 0 species
UBERON:000145620210
cranial nerve II -1.0059.980 gene
1 gene 3 genes 0 species
1 species UBERON:000094101301
stomach 1.0087.493 genes 0 gene
1 gene 2 species 0 species
UBERON:000094530120
blood vessel -1.0058.310 gene
1 gene 3 genes 0 species
1 species UBERON:000198101301
collection of basal ganglia 1.0066.652 genes 0 gene
2 genes 1 species 0 species
UBERON:001001120210
heart left ventricle 1.0044.611 gene 0 gene
3 genes 1 species 0 species
UBERON:000208410310
embryonic post-anal tail 1.0078.472 genes 0 gene
2 genes 1 species 0 species
UBERON:000714420210
diencephalon 1.0072.343 genes 0 gene
1 gene 2 species 0 species
UBERON:000189430120
middle ear -1.0063.630 gene
1 gene 3 genes 0 species
1 species UBERON:000175601301
multi-cellular organism 1.0066.484 genes 0 gene
0 gene
3 species 0 species
UBERON:000046840030
olfactory bulb 1.0062.802 genes 0 gene
2 genes 1 species 0 species
UBERON:000226420210
undifferentiated genital tubercle 1.0070.712 genes 0 gene
2 genes 1 species 0 species
UBERON:000587620210
forebrain 1.0070.424 genes 0 gene
0 gene
3 species 0 species
UBERON:000189040030
brain 1.0073.244 genes 0 gene
0 gene
3 species 0 species
UBERON:000095540030
fibroblast 1.0065.132 genes 0 gene
2 genes 1 species 0 species
CL:000005720210
forelimb -1.0070.820 gene
1 gene 3 genes 0 species
1 species UBERON:000210201301
ureter -1.0067.840 gene
1 gene 3 genes 0 species
1 species UBERON:000005601301
lens of camera-type eye 1.0079.342 genes 0 gene
2 genes 1 species 0 species
UBERON:000096520210
central nervous system 1.0069.094 genes 0 gene
0 gene
3 species 0 species
UBERON:000101740030
main bronchus -1.0064.990 gene
1 gene 3 genes 0 species
1 species UBERON:000218201301
amygdala -1.0064.980 gene
1 gene 3 genes 0 species
1 species UBERON:000187601301
lung 1.0063.963 genes 0 gene
1 gene 2 species 0 species
UBERON:000204830120
secondary palatal shelf -1.0056.220 gene
1 gene 3 genes 0 species
1 species UBERON:000561901301
ear -1.0067.290 gene
1 gene 3 genes 0 species
1 species UBERON:000169001301
choroid plexus -1.0058.100 gene
1 gene 3 genes 0 species
1 species UBERON:000188601301
Ammon's horn 1.0063.722 genes 0 gene
2 genes 1 species 0 species
UBERON:000195420210
cerebral cortex 1.0063.754 genes 0 gene
0 gene
3 species 0 species
UBERON:000095640030
nervous system 1.0061.094 genes 0 gene
0 gene
3 species 0 species
UBERON:000101640030
cardiac ventricle 0.0056.211 gene 1 gene 2 genes 1 species 1 species UBERON:000208211211
camera-type eye 1.0086.992 genes 0 gene
2 genes 1 species 0 species
UBERON:000001920210
urethra -1.0058.810 gene
1 gene 3 genes 0 species
1 species UBERON:000005701301
uterus 1.0056.953 genes 0 gene
1 gene 2 species 0 species
UBERON:000099530120
postcranial axial skeleton 1.0058.711 gene 0 gene
3 genes 1 species 0 species
UBERON:000209010310
peripheral nervous system 1.0067.291 gene 0 gene
3 genes 1 species 0 species
UBERON:000001010310
lip 1.0080.912 genes 0 gene
2 genes 1 species 0 species
UBERON:000183320210
female gonad 1.0082.254 genes 0 gene
0 gene
3 species 0 species
UBERON:000099240030
placenta 1.0068.092 genes 0 gene
2 genes 1 species 0 species
UBERON:000198720210
cerebellum 1.0092.184 genes 0 gene
0 gene
3 species 0 species
UBERON:000203740030
cochlea -1.0057.460 gene
1 gene 3 genes 0 species
1 species UBERON:000184401301
trachea -1.0062.480 gene
1 gene 3 genes 0 species
1 species UBERON:000312601301
calcareous tooth -1.0063.140 gene
1 gene 3 genes 0 species
1 species UBERON:000109101301
olfactory cortex -1.0056.240 gene
1 gene 3 genes 0 species
1 species UBERON:000289401301
primary visual cortex 1.0068.982 genes 0 gene
2 genes 1 species 0 species
UBERON:000243620210
midbrain tegmentum 1.0069.551 gene 0 gene
3 genes 1 species 0 species
UBERON:000194310310
larynx -1.0061.750 gene
1 gene 3 genes 0 species
1 species UBERON:000173701301
esophagus 1.0095.363 genes 0 gene
1 gene 2 species 0 species
UBERON:000104330120
heart 1.0083.244 genes 0 gene
0 gene
3 species 0 species
UBERON:000094840030
respiratory system 1.0062.943 genes 0 gene
1 gene 2 species 0 species
UBERON:000100430120
right kidney 1.0056.952 genes 0 gene
2 genes 1 species 0 species
UBERON:000453920210
outer nuclear layer of retina 1.0066.651 gene 0 gene
3 genes 1 species 0 species
UBERON:000178910310
intestine 1.0069.713 genes 0 gene
1 gene 2 species 0 species
UBERON:000016030120
retina 1.0091.192 genes 0 gene
2 genes 1 species 0 species
UBERON:000096620210
hindlimb 1.0054.973 genes 0 gene
1 gene 2 species 0 species
UBERON:000210330120
epiblast (generic) 1.0075.292 genes 0 gene
2 genes 1 species 0 species
UBERON:000253220210
bone marrow 1.0066.562 genes 0 gene
2 genes 1 species 0 species
UBERON:000237120210
pons -1.0056.230 gene
1 gene 3 genes 0 species
1 species UBERON:000098801301
jejunum 1.0069.283 genes 0 gene
1 gene 2 species 0 species
UBERON:000211530120
integumental system 1.0055.143 genes 0 gene
1 gene 2 species 0 species
UBERON:000241630120
cardiovascular system 1.0055.144 genes 0 gene
0 gene
3 species 0 species
UBERON:000453540030
saliva-secreting gland -1.0090.000 gene
1 gene 3 genes 0 species
1 species UBERON:000104401301
gonad 1.0061.524 genes 0 gene
0 gene
3 species 0 species
UBERON:000099140030
yolk sac 1.0072.032 genes 0 gene
2 genes 1 species 0 species
UBERON:000104020210
neural tube 1.0069.442 genes 0 gene
2 genes 1 species 0 species
UBERON:000104920210
spleen 1.0068.263 genes 0 gene
1 gene 2 species 0 species
UBERON:000210630120
skeletal muscle tissue 1.0072.823 genes 0 gene
1 gene 2 species 0 species
UBERON:000113430120
internal ear -1.0084.490 gene
1 gene 3 genes 0 species
1 species UBERON:000184601301
islet of Langerhans 1.0071.702 genes 0 gene
2 genes 1 species 0 species
UBERON:000000620210
dorsal plus ventral thalamus -1.0058.100 gene
1 gene 3 genes 0 species
1 species UBERON:000189701301
cardiac atrium -1.0056.910 gene
1 gene 3 genes 0 species
1 species UBERON:000208101301
liver 1.0067.784 genes 0 gene
0 gene
3 species 0 species
UBERON:000210740030
duodenum 1.0067.073 genes 0 gene
1 gene 2 species 0 species
UBERON:000211430120
quadriceps femoris 1.0071.123 genes 0 gene
1 gene 2 species 0 species
UBERON:000137730120
ventricular zone 1.0076.742 genes 0 gene
2 genes 1 species 0 species
UBERON:000305320210
metanephros 1.0079.501 gene 0 gene
3 genes 1 species 0 species
UBERON:000008110310
thymus 1.0078.803 genes 0 gene
1 gene 2 species 0 species
UBERON:000237030120
colon 1.0065.733 genes 0 gene
1 gene 2 species 0 species
UBERON:000115530120
striatum 1.0069.302 genes 0 gene
2 genes 1 species 0 species
UBERON:000243520210
adrenal gland 1.0074.623 genes 0 gene
1 gene 2 species 0 species
UBERON:000236930120
appendicular skeleton -1.0063.630 gene
1 gene 3 genes 0 species
1 species UBERON:000209101301
cranial ganglion -1.0069.210 gene
1 gene 3 genes 0 species
1 species UBERON:000171401301
kidney 1.0067.484 genes 0 gene
0 gene
3 species 0 species
UBERON:000211340030
cerebellar cortex 1.0073.952 genes 0 gene
2 genes 1 species 0 species
UBERON:000212920210
meninx -1.0063.140 gene
1 gene 3 genes 0 species
1 species UBERON:000236001301
dorsal root ganglion 1.0074.701 gene 0 gene
3 genes 1 species 0 species
UBERON:000004410310
medulla oblongata -1.0080.290 gene
1 gene 3 genes 0 species
1 species UBERON:000189601301
renal system 1.0077.384 genes 0 gene
0 gene
3 species 0 species
UBERON:000100840030
tongue -1.0080.150 gene
1 gene 3 genes 0 species
1 species UBERON:000172301301
zygote 0.0052.461 gene 1 gene 2 genes 1 species 1 species CL:000036511211
olfactory epithelium 1.0070.981 gene 0 gene
3 genes 1 species 0 species
UBERON:000199710310
embryo 1.0093.682 genes 0 gene
2 genes 1 species 0 species
UBERON:000092220210

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