We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 19 genes 0 species
1 species UBERON:0002206011901
chordate pharynx 1.0068.543 genes 0 gene
17 genes 3 species 0 species
UBERON:0001042301730
optic fissure 1.0055.331 gene 0 gene
19 genes 1 species 0 species
UBERON:0005412101910
epithelial cell of pancreas -1.0065.580 gene
1 gene 19 genes 0 species
1 species CL:0000083011901
semi-lunar valve 1.0059.071 gene 0 gene
19 genes 1 species 0 species
UBERON:0005623101910
inferior olivary complex -1.0060.050 gene
1 gene 19 genes 0 species
1 species UBERON:0002127011901
brain blood vessel 1.0052.381 gene 0 gene
19 genes 1 species 0 species
UBERON:0003499101910
hypothalamus 0.6757.245 genes 1 gene 14 genes 5 species 1 species UBERON:0001898511451
paraxial mesoderm 1.0044.812 genes 0 gene
18 genes 1 species 0 species
UBERON:0003077201810
gingival epithelium 1.0092.431 gene 0 gene
19 genes 1 species 0 species
UBERON:0001949101910
gastrula 0.5086.303 genes 1 gene 16 genes 2 species 1 species UBERON:0004734311621
otic placode -1.0060.200 gene
1 gene 19 genes 0 species
1 species UBERON:0003069011901
cleaving embryo -1.0052.970 gene
3 genes 17 genes 0 species
2 species UBERON:0007010031702
midbrain 1.0065.502 genes 0 gene
18 genes 2 species 0 species
UBERON:0001891201820
retinal neural layer 1.0062.091 gene 0 gene
19 genes 1 species 0 species
UBERON:0003902101910
cornea 1.0090.751 gene 0 gene
19 genes 1 species 0 species
UBERON:0000964101910
hindbrain 1.0056.7313 genes 0 gene
7 genes 13 species 0 species
UBERON:00020281307130
cranial nerve II -1.0045.510 gene
2 genes 18 genes 0 species
2 species UBERON:0000941021802
stomach 0.6781.515 genes 1 gene 14 genes 5 species 1 species UBERON:0000945511451
pituitary gland 0.4367.885 genes 2 genes 13 genes 5 species 2 species UBERON:0000007521352
inferior vagus X ganglion -1.0065.430 gene
1 gene 19 genes 0 species
1 species UBERON:0005363011901
female reproductive system 1.0065.5515 genes 0 gene
5 genes 15 species 0 species
UBERON:00004741505150
epithelium of esophagus 1.0091.221 gene 0 gene
19 genes 1 species 0 species
UBERON:0001976101910
pancreas 1.0063.224 genes 0 gene
16 genes 4 species 0 species
UBERON:0001264401640
kidney epithelium 1.0072.642 genes 0 gene
18 genes 2 species 0 species
UBERON:0004819201820
upper leg skin 1.0091.221 gene 0 gene
19 genes 1 species 0 species
UBERON:0004262101910
extra-ocular muscle -1.0037.850 gene
1 gene 19 genes 0 species
1 species UBERON:0001601011901
limb, paired fin 1.0072.568 genes 0 gene
12 genes 8 species 0 species
UBERON:0002101, UBERON:0002534801280
manus, pectoral fin radial bone -1.0040.660 gene
1 gene 19 genes 0 species
1 species UBERON:0002398, UBERON:2001586011901
optic choroid 1.0058.321 gene 0 gene
19 genes 1 species 0 species
UBERON:0001776101910
putamen 1.0057.271 gene 0 gene
19 genes 1 species 0 species
UBERON:0001874101910
telencephalon 1.0065.1013 genes 0 gene
7 genes 13 species 0 species
UBERON:00018931307130
utricle of membranous labyrinth -1.0047.410 gene
1 gene 19 genes 0 species
1 species UBERON:0001853011901
eyeball of camera-type eye 1.0093.145 genes 0 gene
15 genes 5 species 0 species
UBERON:0010230501550
right ovary 1.0056.631 gene 0 gene
19 genes 1 species 0 species
UBERON:0002118101910
testis 0.4756.5614 genes 5 genes 1 gene 14 species 5 species UBERON:00004731451145
male reproductive system 1.0060.1215 genes 0 gene
5 genes 15 species 0 species
UBERON:00000791505150
autopod skin 1.0090.351 gene 0 gene
19 genes 1 species 0 species
UBERON:0015790101910
multi-cellular organism 1.0078.7520 genes 0 gene
0 gene
19 species 0 species
UBERON:00004682000190
ventricular zone 0.0051.591 gene 1 gene 18 genes 1 species 1 species UBERON:0003053111811
skin epidermis 1.0097.474 genes 0 gene
16 genes 4 species 0 species
UBERON:0001003401640
embryonic post-anal tail 1.0069.061 gene 0 gene
19 genes 1 species 0 species
UBERON:0007144101910
central nervous system 1.0070.0719 genes 0 gene
1 gene 18 species 0 species
UBERON:00010171901180
fibroblast 0.0045.612 genes 2 genes 16 genes 2 species 2 species CL:0000057221622
mesonephros 1.0063.834 genes 0 gene
16 genes 3 species 0 species
UBERON:0000080401630
iris 1.0063.991 gene 0 gene
19 genes 1 species 0 species
UBERON:0001769101910
head 1.0075.179 genes 0 gene
11 genes 8 species 0 species
UBERON:0000033901180
choroid plexus epithelium -1.0053.030 gene
2 genes 18 genes 0 species
2 species UBERON:0003911021802
tongue muscle 1.0041.241 gene 0 gene
19 genes 1 species 0 species
UBERON:0000378101910
trigeminal ganglion -1.0064.800 gene
2 genes 18 genes 0 species
2 species UBERON:0001675021802
forebrain 1.0046.4715 genes 0 gene
5 genes 15 species 0 species
UBERON:00018901505150
vertebral column -1.0046.040 gene
1 gene 19 genes 0 species
1 species UBERON:0001130011901
caecum 0.3366.692 genes 1 gene 17 genes 2 species 1 species UBERON:0001153211721
heart left ventricle, primary heart field 0.2060.183 genes 2 genes 15 genes 3 species 2 species UBERON:0002084, UBERON:0004140321532
olfactory bulb 0.3376.462 genes 1 gene 17 genes 2 species 1 species UBERON:0002264211721
diencephalon 1.0080.256 genes 0 gene
14 genes 6 species 0 species
UBERON:0001894601460
lens of camera-type eye 1.0062.041 gene 0 gene
19 genes 1 species 0 species
UBERON:0000965101910
ear 1.0076.053 genes 0 gene
17 genes 3 species 0 species
UBERON:0001690301730
brain 0.9057.6219 genes 1 gene 0 gene
18 species 1 species UBERON:00009551910181
male germ cell 0.0076.001 gene 1 gene 18 genes 1 species 1 species CL:0000015111811
upper arm skin 1.0093.141 gene 0 gene
19 genes 1 species 0 species
UBERON:0004263101910
smooth muscle tissue 0.3370.062 genes 1 gene 17 genes 2 species 1 species UBERON:0001135211721
heart right ventricle -0.3369.371 gene 2 genes 17 genes 1 species 2 species UBERON:0002080121712
lip 1.0096.511 gene 0 gene
19 genes 1 species 0 species
UBERON:0001833101910
skin of hip 1.0079.561 gene 0 gene
19 genes 1 species 0 species
UBERON:0001554101910
female gonad 0.6957.1311 genes 2 genes 7 genes 11 species 2 species UBERON:00009921127112
internal ear 1.0060.232 genes 0 gene
18 genes 2 species 0 species
UBERON:0001846201820
ileum 0.2073.963 genes 2 genes 15 genes 3 species 2 species UBERON:0002116321532
mitral valve 1.0042.841 gene 0 gene
19 genes 1 species 0 species
UBERON:0002135101910
cartilage tissue 0.0045.071 gene 1 gene 18 genes 1 species 1 species UBERON:0002418111811
blastopore, primitive streak -1.0040.630 gene
1 gene 19 genes 0 species
1 species UBERON:0000100, UBERON:0004341011901
thyroid gland 1.0080.714 genes 0 gene
16 genes 4 species 0 species
UBERON:0002046401640
adenohypophysis 1.0064.623 genes 0 gene
17 genes 3 species 0 species
UBERON:0002196301730
pectoral appendage musculature 1.0060.571 gene 0 gene
19 genes 1 species 0 species
UBERON:0007269101910
larva 1.0086.462 genes 0 gene
18 genes 1 species 0 species
UBERON:0002548201810
bone element 1.0057.846 genes 0 gene
14 genes 6 species 0 species
UBERON:0001474601460
cerebellum 0.7166.4412 genes 2 genes 6 genes 12 species 2 species UBERON:00020371226122
fundus of stomach 1.0072.411 gene 0 gene
19 genes 1 species 0 species
UBERON:0001160101910
pineal body -1.0040.470 gene
1 gene 19 genes 0 species
1 species UBERON:0001905011901
dermis 1.0058.251 gene 0 gene
19 genes 1 species 0 species
UBERON:0002067101910
cardiac ventricle 0.6066.174 genes 1 gene 15 genes 4 species 1 species UBERON:0002082411541
outflow tract 1.0038.402 genes 0 gene
18 genes 2 species 0 species
UBERON:0004145201820
saccule of membranous labyrinth 1.0058.781 gene 0 gene
19 genes 1 species 0 species
UBERON:0001854101910
camera-type eye 1.0067.996 genes 0 gene
14 genes 6 species 0 species
UBERON:0000019601460
caudal tuberculum, substantia nigra 0.0058.251 gene 1 gene 18 genes 1 species 1 species UBERON:2000633, UBERON:0002038111811
choroid plexus -1.0023.420 gene
1 gene 19 genes 0 species
1 species UBERON:0001886011901
thymus 0.2069.953 genes 2 genes 15 genes 3 species 2 species UBERON:0002370321532
tendon -1.0057.160 gene
1 gene 19 genes 0 species
1 species UBERON:0000043011901
motor neuron -1.0042.030 gene
1 gene 19 genes 0 species
1 species CL:0000100011901
epithelium of lens 1.0067.641 gene 0 gene
19 genes 1 species 0 species
UBERON:0001803101910
right cardiac atrium 1.0033.192 genes 0 gene
18 genes 2 species 0 species
UBERON:0002078201820
internal carotid artery -1.0040.890 gene
1 gene 19 genes 0 species
1 species UBERON:0001532011901
1st arch mandibular component 1.0060.121 gene 0 gene
19 genes 1 species 0 species
UBERON:0007237101910
endocardial endothelium 1.0035.421 gene 0 gene
19 genes 1 species 0 species
UBERON:0005316101910
Ammon's horn 0.2057.173 genes 2 genes 15 genes 3 species 2 species UBERON:0001954321532
epiblast (generic) 1.0057.211 gene 0 gene
19 genes 1 species 0 species
UBERON:0002532101910
adrenal cortex 1.0065.422 genes 0 gene
18 genes 2 species 0 species
UBERON:0001235201820
sternocleidomastoid -1.0033.350 gene
1 gene 19 genes 0 species
1 species UBERON:0001128011901
brainstem 0.0055.802 genes 2 genes 16 genes 2 species 2 species UBERON:0002298221622
aorta 1.0065.344 genes 0 gene
16 genes 4 species 0 species
UBERON:0000947401640
right kidney 1.0074.801 gene 0 gene
19 genes 1 species 0 species
UBERON:0004539101910
somite -1.0044.750 gene
3 genes 17 genes 0 species
2 species UBERON:0002329031702
retina 0.6059.154 genes 1 gene 15 genes 4 species 1 species UBERON:0000966411541
intestine 0.8089.829 genes 1 gene 10 genes 9 species 1 species UBERON:0000160911091
esophagus 1.0097.644 genes 0 gene
16 genes 4 species 0 species
UBERON:0001043401640
myocardium 0.0076.071 gene 1 gene 18 genes 1 species 1 species UBERON:0002349111811
blastula 1.0051.935 genes 0 gene
15 genes 4 species 0 species
UBERON:0000307501540
right testis 1.0051.571 gene 0 gene
19 genes 1 species 0 species
UBERON:0004534101910
blood 0.1462.924 genes 3 genes 13 genes 4 species 3 species UBERON:0000178431343
adipose tissue 0.6760.075 genes 1 gene 14 genes 5 species 1 species UBERON:0001013511451
embryonic head 0.0022.811 gene 1 gene 18 genes 1 species 1 species UBERON:0008816111811
skeletal muscle tissue -0.0970.685 genes 6 genes 9 genes 5 species 6 species UBERON:000113456956
spleen 0.1756.257 genes 5 genes 8 genes 7 species 4 species UBERON:000210675874
kidney 1.0068.2820 genes 0 gene
0 gene
19 species 0 species
UBERON:00021132000190
intestinal epithelium 1.0069.611 gene 0 gene
19 genes 1 species 0 species
UBERON:0001277101910
pericardium 0.3365.612 genes 1 gene 17 genes 1 species 1 species UBERON:0002407211711
lung, swim bladder 1.0075.0913 genes 0 gene
7 genes 12 species 0 species
UBERON:0002048, UBERON:00068601307120
cardiac atrium 0.5065.323 genes 1 gene 16 genes 3 species 1 species UBERON:0002081311631
ventral horn of spinal cord 1.0060.581 gene 0 gene
19 genes 1 species 0 species
UBERON:0002257101910
islet of Langerhans 1.0067.522 genes 0 gene
18 genes 2 species 0 species
UBERON:0000006201820
neural tube 1.0058.791 gene 0 gene
19 genes 1 species 0 species
UBERON:0001049101910
pleura 1.0045.381 gene 0 gene
19 genes 1 species 0 species
UBERON:0000977101910
endocardial cushion -1.0058.030 gene
1 gene 19 genes 0 species
1 species UBERON:0002062011901
cerebral hemisphere 1.0056.6913 genes 0 gene
7 genes 13 species 0 species
UBERON:00018691307130
pigmented layer of retina -1.0061.170 gene
2 genes 18 genes 0 species
2 species UBERON:0001782021802
post-anal tail 1.0056.024 genes 0 gene
16 genes 3 species 0 species
UBERON:0007812401630
1st arch maxillary component 1.0060.041 gene 0 gene
19 genes 1 species 0 species
UBERON:0007238101910
cerebellar cortex 1.0064.934 genes 0 gene
16 genes 4 species 0 species
UBERON:0002129401640
heart 0.2954.2811 genes 6 genes 3 genes 10 species 6 species UBERON:00009481163106
liver 0.4055.1514 genes 6 genes 0 gene
13 species 6 species UBERON:00021071460136
colon 0.7882.658 genes 1 gene 11 genes 8 species 1 species UBERON:0001155811181
left testis 1.0051.261 gene 0 gene
19 genes 1 species 0 species
UBERON:0004533101910
muscle organ 1.0081.2810 genes 0 gene
10 genes 9 species 0 species
UBERON:00016301001090
striatum 1.0055.732 genes 0 gene
18 genes 2 species 0 species
UBERON:0002435201820
myocardium of ventricle 0.0039.701 gene 1 gene 18 genes 1 species 1 species UBERON:0001083111811
neurohypophysis 1.0045.291 gene 0 gene
19 genes 1 species 0 species
UBERON:0002198101910
presomitic mesoderm 0.3356.322 genes 1 gene 17 genes 1 species 1 species UBERON:0003059211711
olfactory epithelium 1.0058.181 gene 0 gene
19 genes 1 species 0 species
UBERON:0001997101910
dorsal root ganglion -1.0065.140 gene
2 genes 18 genes 0 species
2 species UBERON:0000044021802
aortic valve 1.0066.061 gene 0 gene
19 genes 1 species 0 species
UBERON:0002137101910
ciliary body 1.0085.631 gene 0 gene
19 genes 1 species 0 species
UBERON:0001775101910
ear vesicle 1.0065.011 gene 0 gene
19 genes 1 species 0 species
UBERON:0003051101910
gall bladder 1.0069.522 genes 0 gene
18 genes 2 species 0 species
UBERON:0002110201820
atrioventricular valve 1.0057.822 genes 0 gene
18 genes 2 species 0 species
UBERON:0002133201820
parathyroid gland, pharyngeal gill 1.0090.332 genes 0 gene
18 genes 1 species 0 species
UBERON:0001132, UBERON:0000206201810
gingiva 1.0095.321 gene 0 gene
19 genes 1 species 0 species
UBERON:0001828101910
peritoneum 1.0064.972 genes 0 gene
18 genes 2 species 0 species
UBERON:0002358201820
zygote -1.0045.380 gene
1 gene 19 genes 0 species
1 species CL:0000365011901
medulla oblongata -0.3364.961 gene 2 genes 17 genes 1 species 2 species UBERON:0001896121712
pylorus 1.0066.862 genes 0 gene
18 genes 2 species 0 species
UBERON:0001166201820
caudate nucleus 1.0056.721 gene 0 gene
19 genes 1 species 0 species
UBERON:0001873101910
embryo 0.7888.758 genes 1 gene 11 genes 7 species 1 species UBERON:0000922811171
left ovary 1.0056.571 gene 0 gene
19 genes 1 species 0 species
UBERON:0002119101910

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