We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0083.371 gene 0 gene
21 genes 1 species 0 species
UBERON:0002206102110
postcranial axial skeleton 1.0058.711 gene 0 gene
21 genes 1 species 0 species
UBERON:0002090102110
semi-lunar valve 1.0090.451 gene 0 gene
21 genes 1 species 0 species
UBERON:0005623102110
brain blood vessel 1.0093.781 gene 0 gene
21 genes 1 species 0 species
UBERON:0003499102110
hindlimb, pelvic fin 1.0061.647 genes 0 gene
15 genes 7 species 0 species
UBERON:0002103, UBERON:0000152701570
myotome 0.3376.312 genes 1 gene 19 genes 2 species 1 species UBERON:0003082211921
paraxial mesoderm 1.0065.253 genes 0 gene
19 genes 2 species 0 species
UBERON:0003077301920
gastrula 1.0072.504 genes 0 gene
18 genes 3 species 0 species
UBERON:0004734401830
midbrain 1.0081.594 genes 0 gene
18 genes 3 species 0 species
UBERON:0001891401830
retinal neural layer 1.0098.541 gene 0 gene
21 genes 1 species 0 species
UBERON:0003902102110
female reproductive system 1.0080.1318 genes 0 gene
4 genes 17 species 0 species
UBERON:00004741804170
epithelium of esophagus 1.0053.871 gene 0 gene
21 genes 1 species 0 species
UBERON:0001976102110
kidney epithelium 1.0071.042 genes 0 gene
20 genes 2 species 0 species
UBERON:0004819202020
pancreas 1.0083.994 genes 0 gene
18 genes 4 species 0 species
UBERON:0001264401840
upper leg skin 1.0079.311 gene 0 gene
21 genes 1 species 0 species
UBERON:0004262102110
extra-ocular muscle 1.0095.801 gene 0 gene
21 genes 1 species 0 species
UBERON:0001601102110
manus, pectoral fin radial bone 1.0079.131 gene 0 gene
21 genes 1 species 0 species
UBERON:0002398, UBERON:2001586102110
face 1.0074.9911 genes 0 gene
11 genes 10 species 0 species
UBERON:000145611011100
telencephalon 1.0098.6617 genes 0 gene
5 genes 16 species 0 species
UBERON:00018931705160
utricle of membranous labyrinth 1.0072.381 gene 0 gene
21 genes 1 species 0 species
UBERON:0001853102110
bulbus arteriosus -1.0049.990 gene
1 gene 21 genes 0 species
1 species UBERON:0004152012101
autopod skin 1.0066.811 gene 0 gene
21 genes 1 species 0 species
UBERON:0015790102110
multi-cellular organism 1.0091.8722 genes 0 gene
0 gene
21 species 0 species
UBERON:00004682200210
ventricular zone 1.0083.352 genes 0 gene
20 genes 2 species 0 species
UBERON:0003053202020
skin epidermis 1.0076.753 genes 0 gene
19 genes 3 species 0 species
UBERON:0001003301930
arterial system 1.0076.925 genes 0 gene
17 genes 5 species 0 species
UBERON:0004572501750
central nervous system 1.0096.7922 genes 0 gene
0 gene
21 species 0 species
UBERON:00010172200210
mesonephros 1.0059.944 genes 0 gene
18 genes 3 species 0 species
UBERON:0000080401830
iris 1.0089.131 gene 0 gene
21 genes 1 species 0 species
UBERON:0001769102110
choroid plexus epithelium 1.0086.342 genes 0 gene
20 genes 2 species 0 species
UBERON:0003911202020
tongue muscle 1.0082.212 genes 0 gene
20 genes 2 species 0 species
UBERON:0000378202020
trigeminal ganglion 1.0088.452 genes 0 gene
20 genes 2 species 0 species
UBERON:0001675202020
forebrain 1.0097.3817 genes 0 gene
5 genes 16 species 0 species
UBERON:00018901705160
vertebral column 0.0046.041 gene 1 gene 20 genes 1 species 1 species UBERON:0001130112011
caecum 1.0087.173 genes 0 gene
19 genes 3 species 0 species
UBERON:0001153301930
ear 1.0090.032 genes 0 gene
20 genes 2 species 0 species
UBERON:0001690202020
brain 1.0099.3522 genes 0 gene
0 gene
21 species 0 species
UBERON:00009552200210
smooth muscle tissue 1.0095.344 genes 0 gene
18 genes 4 species 0 species
UBERON:0001135401840
upper arm skin 1.0073.051 gene 0 gene
21 genes 1 species 0 species
UBERON:0004263102110
heart right ventricle 1.0092.933 genes 0 gene
19 genes 3 species 0 species
UBERON:0002080301930
lip 1.0090.451 gene 0 gene
21 genes 1 species 0 species
UBERON:0001833102110
maxilla 1.0074.971 gene 0 gene
21 genes 1 species 0 species
UBERON:0002397102110
internal ear 1.0053.941 gene 0 gene
21 genes 1 species 0 species
UBERON:0001846102110
mitral valve 1.0078.491 gene 0 gene
21 genes 1 species 0 species
UBERON:0002135102110
olfactory lobe 1.0057.983 genes 0 gene
19 genes 3 species 0 species
UBERON:0005366301930
future cardiac atrium 1.0049.991 gene 0 gene
21 genes 1 species 0 species
UBERON:0010227102110
adenohypophysis 1.0083.823 genes 0 gene
19 genes 3 species 0 species
UBERON:0002196301930
larva 1.0090.852 genes 0 gene
20 genes 1 species 0 species
UBERON:0002548202010
dermis 1.0092.831 gene 0 gene
21 genes 1 species 0 species
UBERON:0002067102110
outflow tract 1.0094.892 genes 0 gene
20 genes 2 species 0 species
UBERON:0004145202020
dorsal horn of spinal cord 1.0068.501 gene 0 gene
21 genes 1 species 0 species
UBERON:0002256102110
saccule of membranous labyrinth 1.0051.661 gene 0 gene
21 genes 1 species 0 species
UBERON:0001854102110
choroid plexus 1.0092.143 genes 0 gene
19 genes 3 species 0 species
UBERON:0001886301930
sinus venosus 1.0062.491 gene 0 gene
21 genes 1 species 0 species
UBERON:0002063102110
forelimb, pectoral fin 1.0079.165 genes 0 gene
17 genes 5 species 0 species
UBERON:0002102, UBERON:0000151501750
tendon 1.0093.301 gene 0 gene
21 genes 1 species 0 species
UBERON:0000043102110
digestive tract 1.0065.3712 genes 0 gene
10 genes 11 species 0 species
UBERON:000155512010110
right cardiac atrium 1.0079.922 genes 0 gene
20 genes 2 species 0 species
UBERON:0002078202020
internal carotid artery 1.0094.841 gene 0 gene
21 genes 1 species 0 species
UBERON:0001532102110
mesenchyme derived from trunk neural crest 1.0063.321 gene 0 gene
21 genes 1 species 0 species
UBERON:0007214102110
calcareous tooth 1.0063.141 gene 0 gene
21 genes 1 species 0 species
UBERON:0001091102110
epiblast (generic) 1.0060.261 gene 0 gene
21 genes 1 species 0 species
UBERON:0002532102110
glossopharyngeal ganglion 1.0072.721 gene 0 gene
21 genes 1 species 0 species
UBERON:0001701102110
sternocleidomastoid 1.0099.161 gene 0 gene
21 genes 1 species 0 species
UBERON:0001128102110
brainstem 1.0082.945 genes 0 gene
17 genes 5 species 0 species
UBERON:0002298501750
somite 1.0069.393 genes 0 gene
19 genes 2 species 0 species
UBERON:0002329301920
retina 1.0096.776 genes 0 gene
16 genes 5 species 0 species
UBERON:0000966601650
esophagus 1.0096.394 genes 0 gene
18 genes 4 species 0 species
UBERON:0001043401840
right testis 1.0074.571 gene 0 gene
21 genes 1 species 0 species
UBERON:0004534102110
blood 1.0092.0910 genes 0 gene
12 genes 9 species 0 species
UBERON:00001781001290
upper lip 1.0087.091 gene 0 gene
21 genes 1 species 0 species
UBERON:0001834102110
skeletal muscle tissue 1.0099.1214 genes 0 gene
8 genes 14 species 0 species
UBERON:00011341408140
integumental system 1.0062.0412 genes 0 gene
10 genes 11 species 0 species
UBERON:000241612010110
cardiovascular system 1.0063.7720 genes 0 gene
2 genes 19 species 0 species
UBERON:00045352002190
intestinal epithelium 1.0055.771 gene 0 gene
21 genes 1 species 0 species
UBERON:0001277102110
islet of Langerhans 1.0080.872 genes 0 gene
20 genes 2 species 0 species
UBERON:0000006202020
neural tube 1.0087.402 genes 0 gene
20 genes 2 species 0 species
UBERON:0001049202020
pleura 1.0092.921 gene 0 gene
21 genes 1 species 0 species
UBERON:0000977102110
endocardial cushion 1.0085.571 gene 0 gene
21 genes 1 species 0 species
UBERON:0002062102110
cerebral hemisphere 1.0098.9017 genes 0 gene
5 genes 16 species 0 species
UBERON:00018691705160
appendicular skeleton 1.0063.632 genes 0 gene
20 genes 2 species 0 species
UBERON:0002091202020
skeletal joint 1.0052.183 genes 0 gene
19 genes 3 species 0 species
UBERON:0000982301930
cerebellar cortex 1.0082.354 genes 0 gene
18 genes 4 species 0 species
UBERON:0002129401840
cranial ganglion 1.0076.912 genes 0 gene
20 genes 2 species 0 species
UBERON:0001714202020
liver 1.0079.8622 genes 0 gene
0 gene
21 species 0 species
UBERON:00021072200210
atrium cardiac jelly 1.0050.001 gene 0 gene
21 genes 1 species 0 species
UBERON:0005261102110
colon 1.0089.749 genes 0 gene
13 genes 9 species 0 species
UBERON:0001155901390
left testis 1.0075.541 gene 0 gene
21 genes 1 species 0 species
UBERON:0004533102110
striatum 1.0096.922 genes 0 gene
20 genes 2 species 0 species
UBERON:0002435202020
myocardium of ventricle 1.0093.083 genes 0 gene
19 genes 3 species 0 species
UBERON:0001083301930
presomitic mesoderm 1.0070.313 genes 0 gene
19 genes 2 species 0 species
UBERON:0003059301920
vein 1.0049.932 genes 0 gene
20 genes 2 species 0 species
UBERON:0001638202020
dorsal root ganglion 1.0082.422 genes 0 gene
20 genes 2 species 0 species
UBERON:0000044202020
ciliary body 1.0083.141 gene 0 gene
21 genes 1 species 0 species
UBERON:0001775102110
ear vesicle 1.0049.091 gene 0 gene
21 genes 1 species 0 species
UBERON:0003051102110
musculature 1.0080.7716 genes 0 gene
6 genes 15 species 0 species
UBERON:00010151606150
gall bladder 0.3394.862 genes 1 gene 19 genes 2 species 1 species UBERON:0002110211921
atrioventricular valve 1.0092.402 genes 0 gene
20 genes 2 species 0 species
UBERON:0002133202020
renal system 1.0078.0621 genes 0 gene
1 gene 20 species 0 species
UBERON:00010082101200
gingiva 1.0086.651 gene 0 gene
21 genes 1 species 0 species
UBERON:0001828102110
zygote -1.0046.110 gene
1 gene 21 genes 0 species
1 species CL:0000365012101
respiratory system 1.0061.0916 genes 0 gene
6 genes 15 species 0 species
UBERON:00010041606150
medulla oblongata 1.0083.253 genes 0 gene
19 genes 3 species 0 species
UBERON:0001896301930
pylorus 1.0083.922 genes 0 gene
20 genes 2 species 0 species
UBERON:0001166202020
caudate nucleus 1.0083.851 gene 0 gene
21 genes 1 species 0 species
UBERON:0001873102110
embryo 1.0091.6112 genes 0 gene
10 genes 11 species 0 species
UBERON:000092212010110
chordate pharynx 1.0057.884 genes 0 gene
18 genes 4 species 0 species
UBERON:0001042401840
optic fissure 1.0071.611 gene 0 gene
21 genes 1 species 0 species
UBERON:0005412102110
epithelial cell of pancreas 1.0087.251 gene 0 gene
21 genes 1 species 0 species
CL:0000083102110
inferior olivary complex 1.0074.611 gene 0 gene
21 genes 1 species 0 species
UBERON:0002127102110
hypothalamus 1.0084.506 genes 0 gene
16 genes 6 species 0 species
UBERON:0001898601660
nervous system 1.0061.0922 genes 0 gene
0 gene
21 species 0 species
UBERON:00010162200210
gingival epithelium 1.0065.971 gene 0 gene
21 genes 1 species 0 species
UBERON:0001949102110
otic placode 1.0065.731 gene 0 gene
21 genes 1 species 0 species
UBERON:0003069102110
cleaving embryo -1.0051.700 gene
2 genes 20 genes 0 species
2 species UBERON:0007010022002
cornea 1.0074.081 gene 0 gene
21 genes 1 species 0 species
UBERON:0000964102110
orbitosphenoid 1.0071.221 gene 0 gene
21 genes 1 species 0 species
UBERON:0002478102110
hindbrain 1.0084.7917 genes 0 gene
5 genes 16 species 0 species
UBERON:00020281705160
cranial nerve II 1.0086.172 genes 0 gene
20 genes 2 species 0 species
UBERON:0000941202020
stomach 1.0090.116 genes 0 gene
16 genes 6 species 0 species
UBERON:0000945601660
pituitary gland 1.0083.367 genes 0 gene
15 genes 7 species 0 species
UBERON:0000007701570
inferior vagus X ganglion 1.0086.741 gene 0 gene
21 genes 1 species 0 species
UBERON:0005363102110
limb, paired fin 1.0092.1211 genes 0 gene
11 genes 11 species 0 species
UBERON:0002101, UBERON:000253411011110
blood vessel 1.0072.906 genes 0 gene
16 genes 6 species 0 species
UBERON:0001981601660
pallium 1.0055.5517 genes 0 gene
5 genes 16 species 0 species
UBERON:00002031705160
putamen 1.0080.351 gene 0 gene
21 genes 1 species 0 species
UBERON:0001874102110
eyeball of camera-type eye 1.0094.257 genes 0 gene
15 genes 6 species 0 species
UBERON:0010230701560
right ovary 1.0089.821 gene 0 gene
21 genes 1 species 0 species
UBERON:0002118102110
testis 1.0094.5221 genes 0 gene
1 gene 20 species 0 species
UBERON:00004732101200
male reproductive system 1.0079.2921 genes 0 gene
1 gene 20 species 0 species
UBERON:00000792101200
pharyngeal arch 1.0083.333 genes 0 gene
19 genes 2 species 0 species
UBERON:0002539301920
embryonic post-anal tail 0.0082.881 gene 1 gene 20 genes 1 species 1 species UBERON:0007144112011
peripheral nervous system 1.0067.293 genes 0 gene
19 genes 3 species 0 species
UBERON:0000010301930
fibroblast 1.0083.884 genes 0 gene
18 genes 4 species 0 species
CL:0000057401840
head 1.0092.3611 genes 0 gene
11 genes 10 species 0 species
UBERON:000003311011100
cranial neural crest 1.0064.991 gene 0 gene
21 genes 1 species 0 species
UBERON:0003099102110
diencephalon 1.0055.889 genes 0 gene
13 genes 8 species 0 species
UBERON:0001894901380
olfactory bulb 0.3396.232 genes 1 gene 19 genes 2 species 1 species UBERON:0002264211921
heart left ventricle, primary heart field 1.0093.625 genes 0 gene
17 genes 5 species 0 species
UBERON:0002084, UBERON:0004140501750
lens of camera-type eye 1.0068.991 gene 0 gene
21 genes 1 species 0 species
UBERON:0000965102110
collection of basal ganglia 1.0077.773 genes 0 gene
19 genes 3 species 0 species
UBERON:0010011301930
male germ cell 1.0076.766 genes 0 gene
16 genes 6 species 0 species
CL:0000015601660
gonad 1.0061.5221 genes 0 gene
1 gene 20 species 0 species
UBERON:00009912101200
skin of hip 1.0086.621 gene 0 gene
21 genes 1 species 0 species
UBERON:0001554102110
female gonad 1.0093.1615 genes 0 gene
7 genes 14 species 0 species
UBERON:00009921507140
ileum 1.0088.896 genes 0 gene
16 genes 6 species 0 species
UBERON:0002116601660
cartilage tissue 1.0087.203 genes 0 gene
19 genes 3 species 0 species
UBERON:0002418301930
blastopore, primitive streak 1.0067.411 gene 0 gene
21 genes 1 species 0 species
UBERON:0000100, UBERON:0004341102110
thyroid gland 0.6090.414 genes 1 gene 17 genes 4 species 1 species UBERON:0002046411741
midbrain tegmentum 1.0060.852 genes 0 gene
20 genes 2 species 0 species
UBERON:0001943202020
pectoral appendage musculature 1.0062.085 genes 0 gene
17 genes 5 species 0 species
UBERON:0007269501750
choroid plexus of fourth ventricle -1.0060.150 gene
1 gene 21 genes 0 species
1 species UBERON:0002290012101
bone element 1.0091.729 genes 0 gene
13 genes 8 species 0 species
UBERON:0001474901380
cerebellum 1.0081.5417 genes 0 gene
5 genes 16 species 0 species
UBERON:00020371705160
fundus of stomach 1.0083.931 gene 0 gene
21 genes 1 species 0 species
UBERON:0001160102110
pineal body 1.0085.811 gene 0 gene
21 genes 1 species 0 species
UBERON:0001905102110
cardiac ventricle 1.0094.316 genes 0 gene
16 genes 6 species 0 species
UBERON:0002082601660
camera-type eye 1.0087.968 genes 0 gene
14 genes 7 species 0 species
UBERON:0000019801470
caudal tuberculum, substantia nigra 1.0085.152 genes 0 gene
20 genes 2 species 0 species
UBERON:2000633, UBERON:0002038202020
thymus 1.0077.735 genes 0 gene
17 genes 5 species 0 species
UBERON:0002370501750
motor neuron 1.0072.211 gene 0 gene
21 genes 1 species 0 species
CL:0000100102110
olfactory cortex 1.0068.742 genes 0 gene
20 genes 2 species 0 species
UBERON:0002894202020
epithelium of lens 1.0086.461 gene 0 gene
21 genes 1 species 0 species
UBERON:0001803102110
1st arch mandibular component 1.0074.171 gene 0 gene
21 genes 1 species 0 species
UBERON:0007237102110
endocardial endothelium 1.0073.331 gene 0 gene
21 genes 1 species 0 species
UBERON:0005316102110
Ammon's horn 1.0095.196 genes 0 gene
16 genes 6 species 0 species
UBERON:0001954601660
midbrain mantle layer 1.0067.041 gene 0 gene
21 genes 1 species 0 species
UBERON:0009581102110
adrenal cortex 1.0088.322 genes 0 gene
20 genes 2 species 0 species
UBERON:0001235202020
aorta 1.0092.454 genes 0 gene
18 genes 4 species 0 species
UBERON:0000947401840
right kidney 1.0075.841 gene 0 gene
21 genes 1 species 0 species
UBERON:0004539102110
intestine 1.0091.5811 genes 0 gene
11 genes 10 species 0 species
UBERON:000016011011100
myocardium 1.0092.623 genes 0 gene
19 genes 3 species 0 species
UBERON:0002349301930
blastula 1.0054.535 genes 0 gene
17 genes 4 species 0 species
UBERON:0000307501740
adipose tissue 1.0090.386 genes 0 gene
16 genes 6 species 0 species
UBERON:0001013601660
kidney blood vessel 1.0080.001 gene 0 gene
21 genes 1 species 0 species
UBERON:0003517102110
embryonic head 1.0087.994 genes 0 gene
18 genes 3 species 0 species
UBERON:0008816401830
spleen 1.0093.8512 genes 0 gene
10 genes 11 species 0 species
UBERON:000210612010110
kidney 1.0083.3022 genes 0 gene
0 gene
21 species 0 species
UBERON:00021132200210
future cardiac ventricle 1.0063.883 genes 0 gene
19 genes 2 species 0 species
UBERON:0006283301920
pericardium 1.0091.183 genes 0 gene
19 genes 2 species 0 species
UBERON:0002407301920
lung, swim bladder 1.0090.4915 genes 0 gene
7 genes 14 species 0 species
UBERON:0002048, UBERON:00068601507140
cardiac atrium 1.0094.985 genes 0 gene
17 genes 5 species 0 species
UBERON:0002081501750
ventral horn of spinal cord 1.0073.191 gene 0 gene
21 genes 1 species 0 species
UBERON:0002257102110
anterior commissure 1.0083.342 genes 0 gene
20 genes 1 species 0 species
UBERON:0000935202010
cardiogenic plate 1.0066.661 gene 0 gene
21 genes 1 species 0 species
UBERON:0004139102110
pigmented layer of retina 1.0093.452 genes 0 gene
20 genes 2 species 0 species
UBERON:0001782202020
1st arch maxillary component 1.0075.911 gene 0 gene
21 genes 1 species 0 species
UBERON:0007238102110
lower lip 1.0093.751 gene 0 gene
21 genes 1 species 0 species
UBERON:0001835102110
heart 1.0094.7519 genes 0 gene
3 genes 18 species