We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
chordate pharynx 1.0057.883 genes 0 gene
21 genes 3 species 0 species
UBERON:0001042302130
postcranial axial skeleton -1.0053.710 gene
1 gene 23 genes 0 species
1 species UBERON:0002090012301
epithelial cell of pancreas 1.0099.011 gene 0 gene
23 genes 1 species 0 species
CL:0000083102310
pharyngeal arch derived gill 1.0071.421 gene 0 gene
23 genes 1 species 0 species
UBERON:0011150102310
inferior olivary complex 1.0098.541 gene 0 gene
23 genes 1 species 0 species
UBERON:0002127102310
hindlimb, pelvic fin 1.0061.6410 genes 0 gene
14 genes 7 species 0 species
UBERON:0002103, UBERON:00001521001470
hypothalamus 1.0099.236 genes 0 gene
18 genes 6 species 0 species
UBERON:0001898601860
paraxial mesoderm 1.0092.361 gene 0 gene
23 genes 1 species 0 species
UBERON:0003077102310
nervous system 1.0061.0924 genes 0 gene
0 gene
20 species 0 species
UBERON:00010162400200
gingival epithelium 1.0099.331 gene 0 gene
23 genes 1 species 0 species
UBERON:0001949102310
gastrula 1.0099.122 genes 0 gene
22 genes 2 species 0 species
UBERON:0004734202220
cleaving embryo 1.0084.901 gene 0 gene
23 genes 1 species 0 species
UBERON:0007010102310
midbrain 1.0099.322 genes 0 gene
22 genes 2 species 0 species
UBERON:0001891202220
retinal neural layer 1.0099.021 gene 0 gene
23 genes 1 species 0 species
UBERON:0003902102310
cornea -1.0074.990 gene
1 gene 23 genes 0 species
1 species UBERON:0000964012301
midgut 1.0066.311 gene 0 gene
23 genes 1 species 0 species
UBERON:0001045102310
hindbrain 1.0099.2119 genes 0 gene
5 genes 15 species 0 species
UBERON:00020281905150
cranial nerve II 0.0098.621 gene 1 gene 22 genes 1 species 1 species UBERON:0000941112211
stomach 1.0099.407 genes 0 gene
17 genes 6 species 0 species
UBERON:0000945701760
pituitary gland 1.0099.447 genes 0 gene
17 genes 7 species 0 species
UBERON:0000007701770
inferior vagus X ganglion 1.0098.811 gene 0 gene
23 genes 1 species 0 species
UBERON:0005363102310
female reproductive system 1.0099.7119 genes 0 gene
5 genes 17 species 0 species
UBERON:00004741905170
epithelium of esophagus 1.0099.481 gene 0 gene
23 genes 1 species 0 species
UBERON:0001976102310
pancreas 1.0099.355 genes 0 gene
19 genes 4 species 0 species
UBERON:0001264501940
kidney epithelium 1.0098.972 genes 0 gene
22 genes 2 species 0 species
UBERON:0004819202220
upper leg skin 1.0099.661 gene 0 gene
23 genes 1 species 0 species
UBERON:0004262102310
limb, paired fin 1.0099.5012 genes 0 gene
12 genes 9 species 0 species
UBERON:0002101, UBERON:00025341201290
face 1.0074.9911 genes 0 gene
13 genes 9 species 0 species
UBERON:00014561101390
blood vessel 0.6058.314 genes 1 gene 19 genes 4 species 1 species UBERON:0001981411941
putamen 1.0099.061 gene 0 gene
23 genes 1 species 0 species
UBERON:0001874102310
telencephalon 1.0097.9817 genes 0 gene
7 genes 14 species 0 species
UBERON:00018931707140
eyeball of camera-type eye 1.0098.586 genes 0 gene
18 genes 6 species 0 species
UBERON:0010230601860
right ovary 1.0099.711 gene 0 gene
23 genes 1 species 0 species
UBERON:0002118102310
testis 0.9299.4623 genes 1 gene 0 gene
20 species 1 species UBERON:00004732310201
autopod skin 1.0098.181 gene 0 gene
23 genes 1 species 0 species
UBERON:0015790102310
multi-cellular organism 1.0099.0924 genes 0 gene
0 gene
20 species 0 species
UBERON:00004682400200
ventricular zone 1.0099.662 genes 0 gene
22 genes 2 species 0 species
UBERON:0003053202220
sympathetic ganglion 1.0064.871 gene 0 gene
23 genes 1 species 0 species
UBERON:0001806102310
embryonic post-anal tail 1.0098.912 genes 0 gene
22 genes 2 species 0 species
UBERON:0007144202220
peripheral nervous system 1.0065.373 genes 0 gene
21 genes 3 species 0 species
UBERON:0000010302130
central nervous system 1.0095.1524 genes 0 gene
0 gene
20 species 0 species
UBERON:00010172400200
fibroblast 1.0099.366 genes 0 gene
18 genes 4 species 0 species
CL:0000057601840
mesonephros 1.0099.043 genes 0 gene
21 genes 3 species 0 species
UBERON:0000080302130
head 1.0099.4011 genes 0 gene
13 genes 9 species 0 species
UBERON:00000331101390
choroid plexus epithelium 1.0096.611 gene 0 gene
23 genes 1 species 0 species
UBERON:0003911102310
tongue muscle 1.0099.021 gene 0 gene
23 genes 1 species 0 species
UBERON:0000378102310
trigeminal ganglion 1.0099.241 gene 0 gene
23 genes 1 species 0 species
UBERON:0001675102310
forebrain 1.0099.5017 genes 0 gene
7 genes 14 species 0 species
UBERON:00018901707140
vertebral column 1.0099.511 gene 0 gene
23 genes 1 species 0 species
UBERON:0001130102310
caecum 1.0099.543 genes 0 gene
21 genes 3 species 0 species
UBERON:0001153302130
diencephalon 1.0077.617 genes 0 gene
17 genes 7 species 0 species
UBERON:0001894701770
heart left ventricle, primary heart field 1.0099.354 genes 0 gene
20 genes 4 species 0 species
UBERON:0002084, UBERON:0004140402040
olfactory bulb 1.0099.203 genes 0 gene
21 genes 3 species 0 species
UBERON:0002264302130
lens of camera-type eye 1.0099.611 gene 0 gene
23 genes 1 species 0 species
UBERON:0000965102310
ear 1.0074.992 genes 0 gene
22 genes 2 species 0 species
UBERON:0001690202220
brain 1.0098.6424 genes 0 gene
0 gene
20 species 0 species
UBERON:00009552400200
collection of basal ganglia 1.0066.653 genes 0 gene
21 genes 3 species 0 species
UBERON:0010011302130
male germ cell 1.0099.048 genes 0 gene
16 genes 6 species 0 species
CL:0000015801660
upper arm skin 1.0099.581 gene 0 gene
23 genes 1 species 0 species
UBERON:0004263102310
smooth muscle tissue 1.0099.614 genes 0 gene
20 genes 4 species 0 species
UBERON:0001135402040
heart right ventricle 1.0099.442 genes 0 gene
22 genes 2 species 0 species
UBERON:0002080202220
lip 1.0099.271 gene 0 gene
23 genes 1 species 0 species
UBERON:0001833102310
gonad 1.0061.5224 genes 0 gene
0 gene
20 species 0 species
UBERON:00009912400200
skin of hip 1.0099.631 gene 0 gene
23 genes 1 species 0 species
UBERON:0001554102310
female gonad 1.0099.7016 genes 0 gene
8 genes 14 species 0 species
UBERON:00009921608140
internal ear 1.0085.991 gene 0 gene
23 genes 1 species 0 species
UBERON:0001846102310
ileum 0.5699.427 genes 2 genes 15 genes 6 species 1 species UBERON:0002116721561
mitral valve 1.0099.171 gene 0 gene
23 genes 1 species 0 species
UBERON:0002135102310
mouth 1.0065.705 genes 0 gene
19 genes 5 species 0 species
UBERON:0000165501950
olfactory lobe 1.0065.983 genes 0 gene
21 genes 3 species 0 species
UBERON:0005366302130
cartilage tissue 1.0099.663 genes 0 gene
21 genes 3 species 0 species
UBERON:0002418302130
blastopore, primitive streak 1.0097.221 gene 0 gene
23 genes 1 species 0 species
UBERON:0000100, UBERON:0004341102310
thyroid gland 0.6099.594 genes 1 gene 19 genes 4 species 1 species UBERON:0002046411941
adenohypophysis 1.0099.463 genes 0 gene
21 genes 3 species 0 species
UBERON:0002196302130
midbrain tegmentum 1.0067.382 genes 0 gene
22 genes 2 species 0 species
UBERON:0001943202220
larva 1.0099.131 gene 0 gene
23 genes 1 species 0 species
UBERON:0002548102310
cerebellum 1.0098.8419 genes 0 gene
5 genes 15 species 0 species
UBERON:00020371905150
fundus of stomach 1.0099.561 gene 0 gene
23 genes 1 species 0 species
UBERON:0001160102310
presumptive midbrain 1.0061.401 gene 0 gene
23 genes 1 species 0 species
UBERON:0009616102310
cardiac ventricle 0.6798.865 genes 1 gene 18 genes 5 species 1 species UBERON:0002082511851
camera-type eye 1.0076.916 genes 0 gene
18 genes 6 species 0 species
UBERON:0000019601860
caudal tuberculum, substantia nigra 1.0099.171 gene 0 gene
23 genes 1 species 0 species
UBERON:2000633, UBERON:0002038102310
choroid plexus 0.3398.642 genes 1 gene 21 genes 2 species 1 species UBERON:0001886212121
thymus 1.0099.516 genes 0 gene
18 genes 5 species 0 species
UBERON:0002370601850
forelimb, pectoral fin 1.0076.384 genes 0 gene
20 genes 4 species 0 species
UBERON:0002102, UBERON:0000151402040
tendon 1.0099.121 gene 0 gene
23 genes 1 species 0 species
UBERON:0000043102310
olfactory cortex 1.0068.742 genes 0 gene
22 genes 2 species 0 species
UBERON:0002894202220
right cardiac atrium 1.0098.522 genes 0 gene
22 genes 2 species 0 species
UBERON:0002078202220
endocardial endothelium 1.0098.861 gene 0 gene
23 genes 1 species 0 species
UBERON:0005316102310
pharyngotympanic tube, spiracle (sensu Vertebrata) 1.0058.791 gene 0 gene
23 genes 1 species 0 species
UBERON:0002393, UBERON:0010019102310
calcareous tooth 1.0076.311 gene 0 gene
23 genes 1 species 0 species
UBERON:0001091102310
Ammon's horn 1.0098.795 genes 0 gene
19 genes 5 species 0 species
UBERON:0001954501950
epiblast (generic) 1.0099.691 gene 0 gene
23 genes 1 species 0 species
UBERON:0002532102310
adrenal cortex 1.0099.282 genes 0 gene
22 genes 2 species 0 species
UBERON:0001235202220
brainstem 1.0096.625 genes 0 gene
19 genes 5 species 0 species
UBERON:0002298501950
aorta 1.0099.463 genes 0 gene
21 genes 3 species 0 species
UBERON:0000947302130
right kidney 1.0098.071 gene 0 gene
23 genes 1 species 0 species
UBERON:0004539102310
retina 1.0098.825 genes 0 gene
19 genes 5 species 0 species
UBERON:0000966501950
somite 1.0090.472 genes 0 gene
22 genes 2 species 0 species
UBERON:0002329202220
intestine 1.0099.5713 genes 0 gene
11 genes 10 species 0 species
UBERON:000016013011100
esophagus 1.0099.625 genes 0 gene
19 genes 4 species 0 species
UBERON:0001043501940
myocardium 1.0099.422 genes 0 gene
22 genes 2 species 0 species
UBERON:0002349202220
blastula 1.0097.164 genes 0 gene
20 genes 4 species 0 species
UBERON:0000307402040
right testis 1.0099.141 gene 0 gene
23 genes 1 species 0 species
UBERON:0004534102310
blood 1.0099.698 genes 0 gene
16 genes 8 species 0 species
UBERON:0000178801680
adipose tissue 0.7599.467 genes 1 gene 16 genes 6 species 1 species UBERON:0001013711661
kidney blood vessel -1.0066.660 gene
1 gene 23 genes 0 species
1 species UBERON:0003517012301
embryonic head 1.0099.271 gene 0 gene
23 genes 1 species 0 species
UBERON:0008816102310
skeletal muscle tissue 1.0099.4017 genes 0 gene
7 genes 13 species 0 species
UBERON:00011341707130
integumental system 1.0062.0411 genes 0 gene
13 genes 11 species 0 species
UBERON:000241611013110
cardiovascular system 1.0055.1423 genes 0 gene
1 gene 19 species 0 species
UBERON:00045352301190
spleen 0.8799.4714 genes 1 gene 9 genes 11 species 1 species UBERON:00021061419111
kidney 1.0099.4724 genes 0 gene
0 gene
20 species 0 species
UBERON:00021132400200
hindgut 1.0057.671 gene 0 gene
23 genes 1 species 0 species
UBERON:0001046102310
pericardium 1.0099.512 genes 0 gene
22 genes 2 species 0 species
UBERON:0002407202220
lung, swim bladder 0.8899.3416 genes 1 gene 7 genes 13 species 1 species UBERON:0002048, UBERON:00068601617131
cardiac atrium 0.5099.163 genes 1 gene 20 genes 3 species 1 species UBERON:0002081312031
islet of Langerhans 1.0099.582 genes 0 gene
22 genes 2 species 0 species
UBERON:0000006202220
neural tube 1.0099.472 genes 0 gene
22 genes 2 species 0 species
UBERON:0001049202220
pleura 1.0099.481 gene 0 gene
23 genes 1 species 0 species
UBERON:0000977102310
appendicular skeleton 1.0063.632 genes 0 gene
22 genes 2 species 0 species
UBERON:0002091202220
skeletal joint 1.0057.743 genes 0 gene
21 genes 3 species 0 species
UBERON:0000982302130
pigmented layer of retina 1.0099.421 gene 0 gene
23 genes 1 species 0 species
UBERON:0001782102310
cerebellar cortex 1.0099.286 genes 0 gene
18 genes 4 species 0 species
UBERON:0002129601840
cranial ganglion 1.0082.682 genes 0 gene
22 genes 2 species 0 species
UBERON:0001714202220
heart 1.0099.3322 genes 0 gene
2 genes 18 species 0 species
UBERON:00009482202180
liver 1.0099.1724 genes 0 gene
0 gene
20 species 0 species
UBERON:00021072400200
cranium 1.0058.291 gene 0 gene
23 genes 1 species 0 species
UBERON:0003128102310
colon 0.8599.4712 genes 1 gene 11 genes 9 species 1 species UBERON:00011551211191
left testis 1.0099.141 gene 0 gene
23 genes 1 species 0 species
UBERON:0004533102310
telencephalic ventricle 1.0055.921 gene 0 gene
23 genes 1 species 0 species
UBERON:0002285102310
muscle organ 1.0099.5519 genes 0 gene
5 genes 15 species 0 species
UBERON:00016301905150
striatum 1.0097.992 genes 0 gene
22 genes 2 species 0 species
UBERON:0002435202220
neurohypophysis 1.0098.901 gene 0 gene
23 genes 1 species 0 species
UBERON:0002198102310
presomitic mesoderm 1.0089.341 gene 0 gene
23 genes 1 species 0 species
UBERON:0003059102310
olfactory epithelium 1.0071.552 genes 0 gene
22 genes 2 species 0 species
UBERON:0001997202220
meninx -1.0063.140 gene
1 gene 23 genes 0 species
1 species UBERON:0002360012301
dorsal root ganglion 1.0099.002 genes 0 gene
22 genes 2 species 0 species
UBERON:0000044202220
musculature 1.0076.9219 genes 0 gene
5 genes 15 species 0 species
UBERON:00010151905150
gall bladder 1.0099.592 genes 0 gene
22 genes 2 species 0 species
UBERON:0002110202220
parathyroid gland, pharyngeal gill 1.0099.551 gene 0 gene
23 genes 1 species 0 species
UBERON:0001132, UBERON:0000206102310
renal system 1.0058.8722 genes 0 gene
2 genes 19 species 0 species
UBERON:00010082202190
gingiva 1.0099.621 gene 0 gene
23 genes 1 species 0 species
UBERON:0001828102310
peritoneum 1.0099.812 genes 0 gene
22 genes 2 species 0 species
UBERON:0002358202220
zygote 1.0098.771 gene 0 gene
23 genes 1 species 0 species
CL:0000365102310
respiratory system 1.0062.9417 genes 0 gene
7 genes 14 species 0 species
UBERON:00010041707140
medulla oblongata 1.0098.883 genes 0 gene
21 genes 3 species 0 species
UBERON:0001896302130
pylorus 1.0099.401 gene 0 gene
23 genes 1 species 0 species
UBERON:0001166102310
caudate nucleus 1.0099.161 gene 0 gene
23 genes 1 species 0 species
UBERON:0001873102310
embryo 1.0099.7211 genes 0 gene
13 genes 11 species 0 species
UBERON:000092211013110
left ovary 1.0099.751 gene 0 gene
23 genes 1 species 0 species
UBERON:0002119102310
rhombomere 1.0059.061 gene 0 gene
23 genes 1 species 0 species
UBERON:0001892102310

Do not show this banner again