We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0077.221 gene 0 gene
15 genes 1 species 0 species
UBERON:0002206101510
optic fissure 1.0068.151 gene 0 gene
15 genes 1 species 0 species
UBERON:0005412101510
epithelial cell of pancreas -1.0056.060 gene
1 gene 15 genes 0 species
1 species CL:0000083011501
semi-lunar valve 1.0061.901 gene 0 gene
15 genes 1 species 0 species
UBERON:0005623101510
brain blood vessel 1.0056.741 gene 0 gene
15 genes 1 species 0 species
UBERON:0003499101510
hypothalamus 1.0079.646 genes 0 gene
10 genes 6 species 0 species
UBERON:0001898601060
paraxial mesoderm 1.0094.882 genes 0 gene
14 genes 2 species 0 species
UBERON:0003077201420
gingival epithelium -1.0042.370 gene
1 gene 15 genes 0 species
1 species UBERON:0001949011501
gastrula 0.0073.371 gene 1 gene 14 genes 1 species 1 species UBERON:0004734111411
otic placode 1.0067.001 gene 0 gene
15 genes 1 species 0 species
UBERON:0003069101510
cleaving embryo 1.0096.872 genes 0 gene
14 genes 2 species 0 species
UBERON:0007010201420
neuron 1.0052.632 genes 0 gene
14 genes 2 species 0 species
CL:0000540201420
midbrain 1.0093.482 genes 0 gene
14 genes 2 species 0 species
UBERON:0001891201420
retinal neural layer 1.0074.551 gene 0 gene
15 genes 1 species 0 species
UBERON:0003902101510
cornea 1.0049.351 gene 0 gene
15 genes 1 species 0 species
UBERON:0000964101510
hindbrain 1.0094.3414 genes 0 gene
2 genes 14 species 0 species
UBERON:00020281402140
cranial nerve II 1.0068.311 gene 0 gene
15 genes 1 species 0 species
UBERON:0000941101510
stomach 0.3360.304 genes 2 genes 10 genes 4 species 2 species UBERON:0000945421042
pituitary gland 0.4357.715 genes 2 genes 9 genes 5 species 2 species UBERON:000000752952
inferior vagus X ganglion 1.0050.691 gene 0 gene
15 genes 1 species 0 species
UBERON:0005363101510
female reproductive system 1.0041.5110 genes 0 gene
6 genes 10 species 0 species
UBERON:00004741006100
kidney epithelium 0.0056.091 gene 1 gene 14 genes 1 species 1 species UBERON:0004819111411
pancreas 0.5046.013 genes 1 gene 12 genes 3 species 1 species UBERON:0001264311231
upper leg skin -1.0039.880 gene
1 gene 15 genes 0 species
1 species UBERON:0004262011501
extra-ocular muscle -1.0053.790 gene
1 gene 15 genes 0 species
1 species UBERON:0001601011501
limb, paired fin 1.0083.358 genes 0 gene
8 genes 8 species 0 species
UBERON:0002101, UBERON:000253480880
manus, pectoral fin radial bone 1.0064.981 gene 0 gene
15 genes 1 species 0 species
UBERON:0002398, UBERON:2001586101510
putamen 1.0073.951 gene 0 gene
15 genes 1 species 0 species
UBERON:0001874101510
telencephalon 1.0073.5113 genes 0 gene
3 genes 13 species 0 species
UBERON:00018931303130
utricle of membranous labyrinth -1.0050.030 gene
1 gene 15 genes 0 species
1 species UBERON:0001853011501
eyeball of camera-type eye 1.0051.834 genes 0 gene
12 genes 4 species 0 species
UBERON:0010230401240
right ovary 1.0049.981 gene 0 gene
15 genes 1 species 0 species
UBERON:0002118101510
testis 0.5081.0612 genes 4 genes 0 gene
12 species 4 species UBERON:00004731240124
male reproductive system 1.0048.3712 genes 0 gene
4 genes 12 species 0 species
UBERON:00000791204120
multi-cellular organism 1.0075.9516 genes 0 gene
0 gene
16 species 0 species
UBERON:00004681600160
ventricular zone 1.0079.412 genes 0 gene
14 genes 2 species 0 species
UBERON:0003053201420
skin epidermis -1.0045.550 gene
1 gene 15 genes 0 species
1 species UBERON:0001003011501
pharyngeal arch 1.0075.362 genes 0 gene
14 genes 2 species 0 species
UBERON:0002539201420
embryonic post-anal tail 1.0058.202 genes 0 gene
14 genes 2 species 0 species
UBERON:0007144201420
central nervous system 1.0083.1116 genes 0 gene
0 gene
16 species 0 species
UBERON:00010171600160
fibroblast -1.0037.020 gene
3 genes 13 genes 0 species
3 species CL:0000057031303
iris -1.0051.890 gene
1 gene 15 genes 0 species
1 species UBERON:0001769011501
head 1.0070.607 genes 0 gene
9 genes 7 species 0 species
UBERON:000003370970
choroid plexus epithelium 1.0058.511 gene 0 gene
15 genes 1 species 0 species
UBERON:0003911101510
tongue muscle 1.0056.651 gene 0 gene
15 genes 1 species 0 species
UBERON:0000378101510
trigeminal ganglion 0.3362.752 genes 1 gene 13 genes 2 species 1 species UBERON:0001675211321
forebrain 1.0082.1314 genes 0 gene
2 genes 14 species 0 species
UBERON:00018901402140
vertebral column -1.0046.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001130011501
caecum -0.3341.141 gene 2 genes 13 genes 1 species 2 species UBERON:0001153121312
heart left ventricle, primary heart field 0.2061.753 genes 2 genes 11 genes 3 species 2 species UBERON:0002084, UBERON:0004140321132
olfactory bulb 1.0075.142 genes 0 gene
14 genes 2 species 0 species
UBERON:0002264201420
lens of camera-type eye 1.0071.412 genes 0 gene
14 genes 2 species 0 species
UBERON:0000965201420
ear 1.0055.732 genes 0 gene
14 genes 2 species 0 species
UBERON:0001690201420
brain 1.0081.4316 genes 0 gene
0 gene
16 species 0 species
UBERON:00009551600160
lens vesicle 1.0075.731 gene 0 gene
15 genes 1 species 0 species
UBERON:0005426101510
upper arm skin -1.0055.580 gene
1 gene 15 genes 0 species
1 species UBERON:0004263011501
smooth muscle tissue 0.3360.082 genes 1 gene 13 genes 2 species 1 species UBERON:0001135211321
heart right ventricle -1.0042.790 gene
3 genes 13 genes 0 species
3 species UBERON:0002080031303
lip 1.0052.681 gene 0 gene
15 genes 1 species 0 species
UBERON:0001833101510
skin of hip -1.0040.690 gene
1 gene 15 genes 0 species
1 species UBERON:0001554011501
female gonad 0.6090.228 genes 2 genes 6 genes 8 species 2 species UBERON:000099282682
internal ear 1.0066.951 gene 0 gene
15 genes 1 species 0 species
UBERON:0001846101510
ileum 0.3348.024 genes 2 genes 10 genes 4 species 2 species UBERON:0002116421042
mitral valve 1.0019.471 gene 0 gene
15 genes 1 species 0 species
UBERON:0002135101510
cartilage tissue -1.0056.250 gene
2 genes 14 genes 0 species
2 species UBERON:0002418021402
blastopore, primitive streak 1.0056.921 gene 0 gene
15 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101510
thyroid gland 0.5042.753 genes 1 gene 12 genes 3 species 1 species UBERON:0002046311231
adenohypophysis 1.0053.372 genes 0 gene
14 genes 2 species 0 species
UBERON:0002196201420
pectoral appendage musculature 1.0060.572 genes 0 gene
14 genes 2 species 0 species
UBERON:0007269201420
choroid plexus of fourth ventricle 1.0065.001 gene 0 gene
15 genes 1 species 0 species
UBERON:0002290101510
larva 1.0072.691 gene 0 gene
15 genes 1 species 0 species
UBERON:0002548101510
bone element 1.0046.755 genes 0 gene
11 genes 5 species 0 species
UBERON:0001474501150
cerebellum 1.0088.2713 genes 0 gene
3 genes 13 species 0 species
UBERON:00020371303130
fundus of stomach -1.0037.920 gene
1 gene 15 genes 0 species
1 species UBERON:0001160011501
pineal body -1.0048.130 gene
1 gene 15 genes 0 species
1 species UBERON:0001905011501
dermis 1.0053.801 gene 0 gene
15 genes 1 species 0 species
UBERON:0002067101510
cardiac ventricle 0.5052.423 genes 1 gene 12 genes 3 species 1 species UBERON:0002082311231
outflow tract 1.0064.282 genes 0 gene
14 genes 2 species 0 species
UBERON:0004145201420
saccule of membranous labyrinth 1.0066.561 gene 0 gene
15 genes 1 species 0 species
UBERON:0001854101510
camera-type eye 1.0057.074 genes 0 gene
12 genes 4 species 0 species
UBERON:0000019401240
caudal tuberculum, substantia nigra 1.0074.852 genes 0 gene
14 genes 2 species 0 species
UBERON:2000633, UBERON:0002038201420
choroid plexus 0.0023.421 gene 1 gene 14 genes 1 species 1 species UBERON:0001886111411
thymus -0.2057.542 genes 3 genes 11 genes 2 species 3 species UBERON:0002370231123
tendon -1.0041.880 gene
1 gene 15 genes 0 species
1 species UBERON:0000043011501
motor neuron 1.0078.531 gene 0 gene
15 genes 1 species 0 species
CL:0000100101510
epithelium of lens -1.0051.510 gene
1 gene 15 genes 0 species
1 species UBERON:0001803011501
right cardiac atrium 1.0033.122 genes 0 gene
14 genes 2 species 0 species
UBERON:0002078201420
internal carotid artery -1.0070.180 gene
1 gene 15 genes 0 species
1 species UBERON:0001532011501
1st arch mandibular component 1.0065.441 gene 0 gene
15 genes 1 species 0 species
UBERON:0007237101510
endocardial endothelium 1.0041.991 gene 0 gene
15 genes 1 species 0 species
UBERON:0005316101510
Ammon's horn 1.0072.904 genes 0 gene
12 genes 4 species 0 species
UBERON:0001954401240
epiblast (generic) 1.0065.911 gene 0 gene
15 genes 1 species 0 species
UBERON:0002532101510
adrenal cortex 1.0041.812 genes 0 gene
14 genes 2 species 0 species
UBERON:0001235201420
sternocleidomastoid -1.0040.100 gene
1 gene 15 genes 0 species
1 species UBERON:0001128011501
brainstem 0.6077.114 genes 1 gene 11 genes 4 species 1 species UBERON:0002298411141
aorta 0.3344.222 genes 1 gene 13 genes 2 species 1 species UBERON:0000947211321
right kidney 1.0078.541 gene 0 gene
15 genes 1 species 0 species
UBERON:0004539101510
retina 0.5070.303 genes 1 gene 12 genes 3 species 1 species UBERON:0000966311231
somite 0.0089.471 gene 1 gene 14 genes 1 species 1 species UBERON:0002329111411
intestine 1.0066.046 genes 0 gene
10 genes 6 species 0 species
UBERON:0000160601060
esophagus 0.5048.133 genes 1 gene 12 genes 3 species 1 species UBERON:0001043311231
myocardium 1.0070.441 gene 0 gene
15 genes 1 species 0 species
UBERON:0002349101510
blastula 1.0085.912 genes 0 gene
14 genes 2 species 0 species
UBERON:0000307201420
right testis 1.0042.851 gene 0 gene
15 genes 1 species 0 species
UBERON:0004534101510
blood 0.0056.704 genes 4 genes 8 genes 4 species 4 species UBERON:000017844844
adipose tissue 0.3342.184 genes 2 genes 10 genes 4 species 2 species UBERON:0001013421042
embryonic head 1.0045.313 genes 0 gene
13 genes 3 species 0 species
UBERON:0008816301330
skeletal muscle tissue 0.6068.578 genes 2 genes 6 genes 8 species 2 species UBERON:000113482682
spleen 0.6055.758 genes 2 genes 6 genes 8 species 2 species UBERON:000210682682
kidney 0.7580.8914 genes 2 genes 0 gene
14 species 2 species UBERON:00021131420142
intestinal epithelium -1.0041.670 gene
1 gene 15 genes 0 species
1 species UBERON:0001277011501
pericardium 0.0041.831 gene 1 gene 14 genes 1 species 1 species UBERON:0002407111411
lung, swim bladder 0.2771.747 genes 4 genes 5 genes 7 species 4 species UBERON:0002048, UBERON:000686074574
cardiac atrium 0.5067.053 genes 1 gene 12 genes 3 species 1 species UBERON:0002081311231
ventral horn of spinal cord 1.0076.201 gene 0 gene
15 genes 1 species 0 species
UBERON:0002257101510
islet of Langerhans 0.0044.821 gene 1 gene 14 genes 1 species 1 species UBERON:0000006111411
neural tube 1.0093.812 genes 0 gene
14 genes 2 species 0 species
UBERON:0001049201420
endocardial cushion 1.0057.571 gene 0 gene
15 genes 1 species 0 species
UBERON:0002062101510
notochord 1.0060.871 gene 0 gene
15 genes 1 species 0 species
UBERON:0002328101510
cerebral hemisphere 1.0072.3113 genes 0 gene
3 genes 13 species 0 species
UBERON:00018691303130
pigmented layer of retina -1.0047.760 gene
2 genes 14 genes 0 species
2 species UBERON:0001782021402
1st arch maxillary component 1.0065.451 gene 0 gene
15 genes 1 species 0 species
UBERON:0007238101510
cerebellar cortex 1.0088.064 genes 0 gene
12 genes 4 species 0 species
UBERON:0002129401240
heart 0.7188.2612 genes 2 genes 2 genes 12 species 2 species UBERON:00009481222122
liver 0.7568.7814 genes 2 genes 0 gene
14 species 2 species UBERON:00021071420142
ileal epithelium -1.0050.860 gene
1 gene 15 genes 0 species
1 species UBERON:0008345011501
colon 0.2572.475 genes 3 genes 8 genes 5 species 3 species UBERON:000115553853
left testis 1.0044.251 gene 0 gene
15 genes 1 species 0 species
UBERON:0004533101510
muscle organ 1.0038.3211 genes 0 gene
5 genes 11 species 0 species
UBERON:00016301105110
striatum 1.0067.852 genes 0 gene
14 genes 2 species 0 species
UBERON:0002435201420
myocardium of ventricle -1.0045.240 gene
1 gene 15 genes 0 species
1 species UBERON:0001083011501
neurohypophysis 1.0045.482 genes 0 gene
14 genes 2 species 0 species
UBERON:0002198201420
presomitic mesoderm 1.0093.042 genes 0 gene
14 genes 2 species 0 species
UBERON:0003059201420
olfactory epithelium -1.0052.190 gene
1 gene 15 genes 0 species
1 species UBERON:0001997011501
dorsal root ganglion 0.0067.691 gene 1 gene 14 genes 1 species 1 species UBERON:0000044111411
aortic valve 1.0058.801 gene 0 gene
15 genes 1 species 0 species
UBERON:0002137101510
ciliary body -1.0054.140 gene
1 gene 15 genes 0 species
1 species UBERON:0001775011501
ear vesicle 1.0072.841 gene 0 gene
15 genes 1 species 0 species
UBERON:0003051101510
musculature 1.0091.9411 genes 0 gene
5 genes 11 species 0 species
UBERON:00010151105110
gall bladder 1.0056.362 genes 0 gene
14 genes 2 species 0 species
UBERON:0002110201420
atrioventricular valve 1.0055.442 genes 0 gene
14 genes 2 species 0 species
UBERON:0002133201420
parathyroid gland, pharyngeal gill 1.0053.921 gene 0 gene
15 genes 1 species 0 species
UBERON:0001132, UBERON:0000206101510
gingiva -1.0050.640 gene
1 gene 15 genes 0 species
1 species UBERON:0001828011501
peritoneum 1.0041.411 gene 0 gene
15 genes 1 species 0 species
UBERON:0002358101510
zygote 1.0053.031 gene 0 gene
15 genes 1 species 0 species
CL:0000365101510
post-anal tail bud 1.0057.331 gene 0 gene
15 genes 1 species 0 species
UBERON:0002533101510
medulla oblongata 1.0080.403 genes 0 gene
13 genes 3 species 0 species
UBERON:0001896301330
pylorus -1.0041.490 gene
1 gene 15 genes 0 species
1 species UBERON:0001166011501
caudate nucleus 1.0070.061 gene 0 gene
15 genes 1 species 0 species
UBERON:0001873101510
embryo 1.0078.888 genes 0 gene
8 genes 8 species 0 species
UBERON:000092280880
left ovary 1.0038.491 gene 0 gene
15 genes 1 species 0 species
UBERON:0002119101510

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