We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
right lobe of thyroid gland 1.0050.371 gene 0 gene
15 genes 1 species 0 species
UBERON:0001119101510
epididymis -1.0020.110 gene
1 gene 15 genes 0 species
1 species UBERON:0001301011501
tendon -1.0041.880 gene
1 gene 15 genes 0 species
1 species UBERON:0000043011501
embryo 1.0058.327 genes 0 gene
9 genes 7 species 0 species
UBERON:000092270970
esophagus 1.0060.484 genes 0 gene
12 genes 4 species 0 species
UBERON:0001043401240
mammary gland fat 1.0044.191 gene 0 gene
15 genes 1 species 0 species
UBERON:0004180101510
heart 0.8660.2213 genes 1 gene 2 genes 13 species 1 species UBERON:00009481312131
brainstem -1.0031.810 gene
2 genes 14 genes 0 species
2 species UBERON:0002298021402
skeletal muscle tissue of rectus abdominis -1.0045.180 gene
1 gene 15 genes 0 species
1 species UBERON:0004511011501
gall bladder 0.0038.501 gene 1 gene 14 genes 1 species 1 species UBERON:0002110111411
myocardium -1.0042.450 gene
1 gene 15 genes 0 species
1 species UBERON:0002349011501
intestine 1.0059.616 genes 0 gene
10 genes 6 species 0 species
UBERON:0000160601060
retina 0.3369.152 genes 1 gene 13 genes 2 species 1 species UBERON:0000966211321
neurohypophysis 1.0038.561 gene 0 gene
15 genes 1 species 0 species
UBERON:0002198101510
globus pallidus -1.0041.560 gene
1 gene 15 genes 0 species
1 species UBERON:0001875011501
jejunum 0.2056.343 genes 2 genes 11 genes 3 species 2 species UBERON:0002115321132
aorta 1.0046.193 genes 0 gene
13 genes 3 species 0 species
UBERON:0000947301330
synovial membrane of synovial joint -1.0034.350 gene
1 gene 15 genes 0 species
1 species UBERON:0002018011501
epiblast (generic) 1.0079.191 gene 0 gene
15 genes 1 species 0 species
UBERON:0002532101510
pons -1.0041.460 gene
3 genes 13 genes 0 species
3 species UBERON:0000988031303
bone marrow 0.6798.265 genes 1 gene 10 genes 5 species 1 species UBERON:0002371511051
nasal cavity epithelium -1.0041.040 gene
1 gene 15 genes 0 species
1 species UBERON:0005384011501
vagina 1.0050.141 gene 0 gene
15 genes 1 species 0 species
UBERON:0000996101510
yolk sac 1.0063.541 gene 0 gene
15 genes 1 species 0 species
UBERON:0001040101510
quadriceps femoris 0.5056.093 genes 1 gene 12 genes 3 species 1 species UBERON:0001377311231
saliva-secreting gland 0.3338.922 genes 1 gene 13 genes 2 species 1 species UBERON:0001044211321
vas deferens -1.0015.940 gene
1 gene 15 genes 0 species
1 species UBERON:0001000011501
adrenal cortex 1.0041.812 genes 0 gene
14 genes 2 species 0 species
UBERON:0001235201420
parotid gland -1.0041.810 gene
1 gene 15 genes 0 species
1 species UBERON:0001831011501
right testis 1.0083.451 gene 0 gene
15 genes 1 species 0 species
UBERON:0004534101510
liver 0.6370.0613 genes 3 genes 0 gene
13 species 3 species UBERON:00021071330133
skeletal muscle tissue 0.8086.909 genes 1 gene 6 genes 9 species 1 species UBERON:000113491691
neural tube 1.0058.832 genes 0 gene
14 genes 2 species 0 species
UBERON:0001049201420
cardiac atrium 1.0049.993 genes 0 gene
13 genes 3 species 0 species
UBERON:0002081301330
mammary gland 1.0056.984 genes 0 gene
12 genes 4 species 0 species
UBERON:0001911401240
right kidney -1.0035.350 gene
1 gene 15 genes 0 species
1 species UBERON:0004539011501
metanephros 0.0041.921 gene 1 gene 14 genes 1 species 1 species UBERON:0000081111411
embryonic head -1.0021.100 gene
1 gene 15 genes 0 species
1 species UBERON:0008816011501
triceps brachii 1.0047.722 genes 0 gene
14 genes 2 species 0 species
UBERON:0001509201420
adipose tissue 1.0060.906 genes 0 gene
10 genes 6 species 0 species
UBERON:0001013601060
blood 0.4353.305 genes 2 genes 9 genes 5 species 2 species UBERON:000017852952
dorsal plus ventral thalamus -0.3341.521 gene 2 genes 13 genes 1 species 2 species UBERON:0001897121312
ventricular zone 0.0068.181 gene 1 gene 14 genes 1 species 1 species UBERON:0003053111411
pericardium -1.0041.830 gene
1 gene 15 genes 0 species
1 species UBERON:0002407011501
thymus 0.6098.024 genes 1 gene 11 genes 4 species 1 species UBERON:0002370411141
skeleton of lower jaw -1.0028.570 gene
1 gene 15 genes 0 species
1 species UBERON:0003278011501
right ovary 1.0059.751 gene 0 gene
15 genes 1 species 0 species
UBERON:0002118101510
epithelium of bronchus 1.0034.742 genes 0 gene
14 genes 2 species 0 species
UBERON:0002031201420
cerebellar cortex 1.0064.124 genes 0 gene
12 genes 4 species 0 species
UBERON:0002129401240
peritoneum 1.0041.411 gene 0 gene
15 genes 1 species 0 species
UBERON:0002358101510
adrenal gland 0.6063.814 genes 1 gene 11 genes 4 species 1 species UBERON:0002369411141
colon 0.2589.655 genes 3 genes 8 genes 5 species 3 species UBERON:000115553853
islet of Langerhans 1.0065.832 genes 0 gene
14 genes 2 species 0 species
UBERON:0000006201420
female reproductive system 1.0041.5111 genes 0 gene
5 genes 11 species 0 species
UBERON:00004741105110
spleen 0.7898.038 genes 1 gene 7 genes 8 species 1 species UBERON:000210681781
inferior vagus X ganglion -1.0041.560 gene
1 gene 15 genes 0 species
1 species UBERON:0005363011501
kidney 1.0058.4715 genes 0 gene
1 gene 15 species 0 species
UBERON:00021131501150
striatum 1.0059.272 genes 0 gene
14 genes 2 species 0 species
UBERON:0002435201420
hair follicle 1.0041.991 gene 0 gene
15 genes 1 species 0 species
UBERON:0002073101510
small intestine 1.0046.985 genes 0 gene
11 genes 5 species 0 species
UBERON:0002108501150
tongue 0.3348.832 genes 1 gene 13 genes 2 species 1 species UBERON:0001723211321
zygote 1.0075.241 gene 0 gene
15 genes 1 species 0 species
CL:0000365101510
endometrium 0.2046.983 genes 2 genes 11 genes 3 species 2 species UBERON:0001295321132
caudate nucleus 1.0074.441 gene 0 gene
15 genes 1 species 0 species
UBERON:0001873101510
visceral pleura -1.0041.190 gene
1 gene 15 genes 0 species
1 species UBERON:0002401011501
supraspinatus muscle 1.0051.271 gene 0 gene
15 genes 1 species 0 species
UBERON:0002383101510
skin of leg 1.0055.011 gene 0 gene
15 genes 1 species 0 species
UBERON:0001511101510
left testis 1.0083.381 gene 0 gene
15 genes 1 species 0 species
UBERON:0004533101510
pylorus -1.0041.490 gene
1 gene 15 genes 0 species
1 species UBERON:0001166011501
gingival epithelium -1.0042.370 gene
1 gene 15 genes 0 species
1 species UBERON:0001949011501
skeletal muscle tissue of biceps brachii -1.0042.250 gene
1 gene 15 genes 0 species
1 species UBERON:0004502011501
pigmented layer of retina -1.0040.590 gene
1 gene 15 genes 0 species
1 species UBERON:0001782011501
bronchial epithelial cell 1.0067.291 gene 0 gene
15 genes 1 species 0 species
CL:0002328101510
gluteal muscle 1.0044.742 genes 0 gene
14 genes 2 species 0 species
UBERON:0002000201420
deltoid -1.0041.820 gene
1 gene 15 genes 0 species
1 species UBERON:0001476011501
intercostal muscle 1.0048.691 gene 0 gene
15 genes 1 species 0 species
UBERON:0001111101510
dorsal root ganglion -1.0056.800 gene
2 genes 14 genes 0 species
2 species UBERON:0000044021402
medulla oblongata -1.0041.470 gene
2 genes 14 genes 0 species
2 species UBERON:0001896021402
gingiva -1.0039.270 gene
1 gene 15 genes 0 species
1 species UBERON:0001828011501
right cardiac atrium 0.0025.221 gene 1 gene 14 genes 1 species 1 species UBERON:0002078111411
milk 1.0042.851 gene 0 gene
15 genes 1 species 0 species
UBERON:0001913101510
neocortex 1.0042.5812 genes 0 gene
4 genes 12 species 0 species
UBERON:00019501204120
uterine cervix 0.3341.652 genes 1 gene 13 genes 2 species 1 species UBERON:0000002211321
lymph node 1.0096.975 genes 0 gene
11 genes 5 species 0 species
UBERON:0000029501150
left ovary 1.0055.561 gene 0 gene
15 genes 1 species 0 species
UBERON:0002119101510
hypothalamus 0.3365.314 genes 2 genes 10 genes 4 species 2 species UBERON:0001898421042
hindbrain 1.0059.4713 genes 0 gene
3 genes 13 species 0 species
UBERON:00020281303130
ileum 0.2051.843 genes 2 genes 11 genes 3 species 2 species UBERON:0002116321132
autopod skin -1.0022.450 gene
1 gene 15 genes 0 species
1 species UBERON:0015790011501
laryngeal cartilage 1.0050.881 gene 0 gene
15 genes 1 species 0 species
UBERON:0001739101510
epithelium of nasopharynx -1.0044.220 gene
1 gene 15 genes 0 species
1 species UBERON:0001951011501
pancreas 1.0054.254 genes 0 gene
12 genes 4 species 0 species
UBERON:0001264401240
substantia nigra 1.0058.221 gene 0 gene
15 genes 1 species 0 species
UBERON:0002038101510
midbrain 1.0059.742 genes 0 gene
14 genes 2 species 0 species
UBERON:0001891201420
bronchus 1.0041.232 genes 0 gene
14 genes 2 species 0 species
UBERON:0002185201420
adenohypophysis 1.0056.822 genes 0 gene
14 genes 2 species 0 species
UBERON:0002196201420
metanephros cortex 0.0051.371 gene 1 gene 14 genes 1 species 1 species UBERON:0010533111411
mitral valve 1.0033.211 gene 0 gene
15 genes 1 species 0 species
UBERON:0002135101510
limb 1.0063.567 genes 0 gene
9 genes 7 species 0 species
UBERON:000210170970
thyroid gland 0.0050.152 genes 2 genes 12 genes 2 species 2 species UBERON:0002046221222
left lobe of thyroid gland 1.0051.631 gene 0 gene
15 genes 1 species 0 species
UBERON:0001120101510
heart right ventricle -1.0041.760 gene
2 genes 14 genes 0 species
2 species UBERON:0002080021402
urinary bladder 1.0063.124 genes 0 gene
12 genes 4 species 0 species
UBERON:0001255401240
myometrium 1.0051.732 genes 0 gene
14 genes 2 species 0 species
UBERON:0001296201420
parietal pleura -1.0041.400 gene
1 gene 15 genes 0 species
1 species UBERON:0002400011501
prostate gland 0.0051.401 gene 1 gene 14 genes 1 species 1 species UBERON:0002367111411
eyeball of camera-type eye 0.3311.302 genes 1 gene 13 genes 2 species 1 species UBERON:0010230211321
brain 0.7559.5514 genes 2 genes 0 gene
14 species 2 species UBERON:00009551420142
retinal neural layer 1.0061.561 gene 0 gene
15 genes 1 species 0 species
UBERON:0003902101510
pituitary gland 0.3379.834 genes 2 genes 10 genes 4 species 2 species UBERON:0000007421042
stomach 0.3354.364 genes 2 genes 10 genes 4 species 2 species UBERON:0000945421042
biceps brachii -1.0042.660 gene
1 gene 15 genes 0 species
1 species UBERON:0001507011501
multi-cellular organism 1.0068.4616 genes 0 gene
0 gene
16 species 0 species
UBERON:00004681600160
infraspinatus muscle 1.0054.031 gene 0 gene
15 genes 1 species 0 species
UBERON:0001477101510
putamen 1.0073.121 gene 0 gene
15 genes 1 species 0 species
UBERON:0001874101510
seminal vesicle -1.0040.740 gene
1 gene 15 genes 0 species
1 species UBERON:0000998011501
mammary duct -1.0041.950 gene
1 gene 15 genes 0 species
1 species UBERON:0001765011501
head 1.0028.396 genes 0 gene
10 genes 6 species 0 species
UBERON:0000033601060
olfactory bulb 1.0066.762 genes 0 gene
14 genes 2 species 0 species
UBERON:0002264201420
trigeminal ganglion -1.0076.220 gene
2 genes 14 genes 0 species
2 species UBERON:0001675021402
undifferentiated genital tubercle 1.0068.281 gene 0 gene
15 genes 1 species 0 species
UBERON:0005876101510
trophectoderm -1.0029.380 gene
1 gene 15 genes 0 species
1 species UBERON:0004345011501
gastrocnemius 1.0056.551 gene 0 gene
15 genes 1 species 0 species
UBERON:0001388101510
left cardiac atrium 1.0028.991 gene 0 gene
15 genes 1 species 0 species
UBERON:0002079101510
tendon of biceps brachii -1.0041.590 gene
1 gene 15 genes 0 species
1 species UBERON:0008188011501
duodenum 0.2059.383 genes 2 genes 11 genes 3 species 2 species UBERON:0002114321132
heart left ventricle -0.2057.532 genes 3 genes 11 genes 2 species 3 species UBERON:0002084231123
testis 1.0093.6816 genes 0 gene
0 gene
16 species 0 species
UBERON:00004731600160
forebrain 1.0057.0112 genes 0 gene
4 genes 12 species 0 species
UBERON:00018901204120
caecum 0.3342.552 genes 1 gene 13 genes 2 species 1 species UBERON:0001153211321
amniotic fluid -1.0042.600 gene
1 gene 15 genes 0 species
1 species UBERON:0000173011501
large intestine 1.0041.796 genes 0 gene
10 genes 6 species 0 species
UBERON:0000059601060
amygdala 0.0060.961 gene 1 gene 14 genes 1 species 1 species UBERON:0001876111411
lens of camera-type eye 1.0063.001 gene 0 gene
15 genes 1 species 0 species
UBERON:0000965101510
interventricular septum -1.0052.960 gene
1 gene 15 genes 0 species
1 species UBERON:0002094011501
fibroblast 1.0061.234 genes 0 gene
12 genes 4 species 0 species
CL:0000057401240
ureter 1.0038.551 gene 0 gene
15 genes 1 species 0 species
UBERON:0000056101510
upper leg skin 1.0077.191 gene 0 gene
15 genes 1 species 0 species
UBERON:0004262101510
lung 0.8098.299 genes 1 gene 6 genes 9 species 1 species UBERON:000204891691
tongue muscle 1.0043.731 gene 0 gene
15 genes 1 species 0 species
UBERON:0000378101510
fundus of stomach 1.0053.131 gene 0 gene
15 genes 1 species 0 species
UBERON:0001160101510
uterus 0.5057.016 genes 2 genes 8 genes 6 species 2 species UBERON:000099562862
urethra 0.0041.751 gene 1 gene 14 genes 1 species 1 species UBERON:0000057111411
Ammon's horn 1.0059.734 genes 0 gene
12 genes 4 species 0 species
UBERON:0001954401240
diaphragm 1.0041.241 gene 0 gene
15 genes 1 species 0 species
UBERON:0001103101510
cartilage tissue 0.0042.051 gene 1 gene 14 genes 1 species 1 species UBERON:0002418111411
cardiac ventricle 0.3369.462 genes 1 gene 13 genes 2 species 1 species UBERON:0002082211321
cerebral cortex 1.0061.9512 genes 0 gene
4 genes 12 species 0 species
UBERON:00009561204120
smooth muscle tissue 0.3356.112 genes 1 gene 13 genes 2 species 1 species UBERON:0001135211321
skin of hip -1.0036.940 gene
1 gene 15 genes 0 species
1 species UBERON:0001554011501
female gonad 0.8061.859 genes 1 gene 6 genes 9 species 1 species UBERON:000099291691
vertebral column -1.0046.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001130011501
choroid plexus -1.0023.420 gene
1 gene 15 genes 0 species
1 species UBERON:0001886011501
oviduct epithelium 1.0048.952 genes 0 gene
14 genes 2 species 0 species
UBERON:0004804201420
embryonic post-anal tail 1.0062.761 gene 0 gene
15 genes 1 species 0 species
UBERON:0007144101510
coronary artery 1.0041.671 gene 0 gene
15 genes 1 species 0 species
UBERON:0001621101510
endocardial endothelium 1.0025.041 gene 0 gene
15 genes 1 species 0 species
UBERON:0005316101510
lip 1.0070.271 gene 0 gene
15 genes 1 species 0 species
UBERON:0001833101510
penis -1.0041.580 gene
2 genes 14 genes 0 species
2 species UBERON:0000989021402
trachea 0.0043.931 gene 1 gene 14 genes 1 species 1 species UBERON:0003126111411
cerebellum 0.8667.4713 genes 1 gene 2 genes 13 species 1 species UBERON:00020371312131

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