We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
spinal cord alar plate 1.0072.221 gene 0 gene
16 genes 1 species 0 species
UBERON:0004063101610
mammillary body 1.0041.271 gene 0 gene
16 genes 1 species 0 species
UBERON:0002206101610
optic fissure 1.0055.371 gene 0 gene
16 genes 1 species 0 species
UBERON:0005412101610
future diencephalon 1.0068.733 genes 0 gene
14 genes 2 species 0 species
UBERON:0006222301420
semi-lunar valve -1.0037.770 gene
1 gene 16 genes 0 species
1 species UBERON:0005623011601
brain blood vessel -1.0044.370 gene
1 gene 16 genes 0 species
1 species UBERON:0003499011601
prechordal plate 1.0056.651 gene 0 gene
16 genes 1 species 0 species
UBERON:0003063101610
hypothalamus -0.4354.112 genes 5 genes 10 genes 2 species 5 species UBERON:0001898251025
paraxial mesoderm 1.0044.812 genes 0 gene
15 genes 1 species 0 species
UBERON:0003077201510
gastrula 0.5069.543 genes 1 gene 13 genes 2 species 1 species UBERON:0004734311321
cleaving embryo -0.3354.301 gene 2 genes 14 genes 1 species 1 species UBERON:0007010121411
midbrain 1.0082.583 genes 0 gene
14 genes 2 species 0 species
UBERON:0001891301420
neuron 1.0050.571 gene 0 gene
16 genes 1 species 0 species
CL:0000540101610
retinal neural layer -1.0013.600 gene
1 gene 16 genes 0 species
1 species UBERON:0003902011601
cornea -1.0044.310 gene
1 gene 16 genes 0 species
1 species UBERON:0000964011601
hindbrain 1.0074.544 genes 0 gene
13 genes 3 species 0 species
UBERON:0002028401330
stomach -0.6031.731 gene 4 genes 12 genes 1 species 4 species UBERON:0000945141214
pituitary gland 0.0049.903 genes 3 genes 11 genes 3 species 3 species UBERON:0000007331133
pancreas -1.0037.000 gene
4 genes 13 genes 0 species
4 species UBERON:0001264041304
extra-ocular muscle 1.0054.901 gene 0 gene
16 genes 1 species 0 species
UBERON:0001601101610
midbrain-hindbrain boundary -1.0050.940 gene
1 gene 16 genes 0 species
1 species UBERON:0003052011601
limb, paired fin 1.0051.802 genes 0 gene
15 genes 2 species 0 species
UBERON:0002101, UBERON:0002534201520
Rohon-Beard neuron -1.0049.980 gene
1 gene 16 genes 0 species
1 species CL:0000247011601
pallium 1.0055.553 genes 0 gene
14 genes 3 species 0 species
UBERON:0000203301430
putamen -1.0023.210 gene
1 gene 16 genes 0 species
1 species UBERON:0001874011601
telencephalon 1.0076.135 genes 0 gene
12 genes 4 species 0 species
UBERON:0001893501240
eyeball of camera-type eye 0.5038.603 genes 1 gene 13 genes 2 species 1 species UBERON:0010230311321
right ovary -1.0018.520 gene
1 gene 16 genes 0 species
1 species UBERON:0002118011601
testis -0.6337.683 genes 13 genes 1 gene 3 species 13 species UBERON:00004733131313
male reproductive system 1.0033.233 genes 0 gene
14 genes 3 species 0 species
UBERON:0000079301430
autopod skin -1.007.220 gene
1 gene 16 genes 0 species
1 species UBERON:0015790011601
multi-cellular organism 1.0064.5716 genes 0 gene
1 gene 15 species 0 species
UBERON:00004681601150
ventricular zone 0.0063.341 gene 1 gene 15 genes 1 species 1 species UBERON:0003053111511
skin epidermis 1.0042.241 gene 0 gene
16 genes 1 species 0 species
UBERON:0001003101610
epithalamus 0.3364.282 genes 1 gene 14 genes 2 species 1 species UBERON:0001899211421
embryonic post-anal tail -1.0034.510 gene
2 genes 15 genes 0 species
2 species UBERON:0007144021502
central nervous system 1.0037.2712 genes 0 gene
5 genes 11 species 0 species
UBERON:00010171205110
fibroblast -1.0031.490 gene
1 gene 16 genes 0 species
1 species CL:0000057011601
mesonephros 0.004.841 gene 1 gene 15 genes 1 species 1 species UBERON:0000080111511
iris -1.0038.860 gene
1 gene 16 genes 0 species
1 species UBERON:0001769011601
head 1.0070.516 genes 0 gene
11 genes 5 species 0 species
UBERON:0000033601150
choroid plexus epithelium -1.0039.040 gene
1 gene 16 genes 0 species
1 species UBERON:0003911011601
tongue muscle -1.0030.840 gene
1 gene 16 genes 0 species
1 species UBERON:0000378011601
trigeminal ganglion -1.0039.050 gene
1 gene 16 genes 0 species
1 species UBERON:0001675011601
forebrain 1.0066.978 genes 0 gene
9 genes 7 species 0 species
UBERON:000189080970
vertebral column -1.0046.040 gene
1 gene 16 genes 0 species
1 species UBERON:0001130011601
caecum -1.0011.870 gene
2 genes 15 genes 0 species
2 species UBERON:0001153021502
diencephalon 1.0094.736 genes 0 gene
11 genes 5 species 0 species
UBERON:0001894601150
olfactory bulb 1.0053.833 genes 0 gene
14 genes 3 species 0 species
UBERON:0002264301430
heart left ventricle, primary heart field -1.0059.720 gene
5 genes 12 genes 0 species
5 species UBERON:0002084, UBERON:0004140051205
lens of camera-type eye 1.0033.491 gene 0 gene
16 genes 1 species 0 species
UBERON:0000965101610
ear 1.0038.802 genes 0 gene
15 genes 2 species 0 species
UBERON:0001690201520
brain 0.5046.6712 genes 4 genes 1 gene 11 species 4 species UBERON:00009551241114
smooth muscle tissue -0.3330.611 gene 2 genes 14 genes 1 species 2 species UBERON:0001135121412
heart right ventricle -1.008.980 gene
1 gene 16 genes 0 species
1 species UBERON:0002080011601
lip -1.0012.270 gene
1 gene 16 genes 0 species
1 species UBERON:0001833011601
female gonad -0.2948.065 genes 9 genes 3 genes 5 species 9 species UBERON:000099259359
internal ear 1.0060.232 genes 0 gene
15 genes 2 species 0 species
UBERON:0001846201520
head mesenchyme 1.0079.251 gene 0 gene
16 genes 1 species 0 species
UBERON:0005253101610
ileum -1.0035.130 gene
4 genes 13 genes 0 species
4 species UBERON:0002116041304
mitral valve -1.0011.490 gene
1 gene 16 genes 0 species
1 species UBERON:0002135011601
olfactory lobe 1.0057.983 genes 0 gene
14 genes 3 species 0 species
UBERON:0005366301430
cartilage tissue -1.008.620 gene
1 gene 16 genes 0 species
1 species UBERON:0002418011601
blastopore, primitive streak -1.0040.630 gene
1 gene 16 genes 0 species
1 species UBERON:0000100, UBERON:0004341011601
thyroid gland -1.0029.750 gene
4 genes 13 genes 0 species
4 species UBERON:0002046041304
adenohypophysis -1.0039.220 gene
2 genes 15 genes 0 species
2 species UBERON:0002196021502
midbrain tegmentum 1.0053.131 gene 0 gene
16 genes 1 species 0 species
UBERON:0001943101610
larva 1.0061.692 genes 0 gene
15 genes 1 species 0 species
UBERON:0002548201510
bone element 1.0037.951 gene 0 gene
16 genes 1 species 0 species
UBERON:0001474101610
cerebellum -0.3387.494 genes 8 genes 5 genes 3 species 8 species UBERON:000203748538
fundus of stomach -1.0016.680 gene
1 gene 16 genes 0 species
1 species UBERON:0001160011601
pineal body 1.0074.921 gene 0 gene
16 genes 1 species 0 species
UBERON:0001905101610
presumptive midbrain 1.0061.402 genes 0 gene
15 genes 2 species 0 species
UBERON:0009616201520
dermis 1.0055.321 gene 0 gene
16 genes 1 species 0 species
UBERON:0002067101610
cardiac ventricle -1.0041.790 gene
3 genes 14 genes 0 species
2 species UBERON:0002082031402
outflow tract -1.0050.830 gene
1 gene 16 genes 0 species
1 species UBERON:0004145011601
camera-type eye 1.0040.413 genes 0 gene
14 genes 2 species 0 species
UBERON:0000019301420
caudal tuberculum, substantia nigra -1.0042.180 gene
2 genes 15 genes 0 species
2 species UBERON:2000633, UBERON:0002038021502
choroid plexus -1.0023.420 gene
1 gene 16 genes 0 species
1 species UBERON:0001886011601
thymus -0.3337.221 gene 2 genes 14 genes 1 species 2 species UBERON:0002370121412
epithelium of lens -1.0039.680 gene
1 gene 16 genes 0 species
1 species UBERON:0001803011601
right cardiac atrium -1.008.440 gene
1 gene 16 genes 0 species
1 species UBERON:0002078011601
internal carotid artery -1.0040.890 gene
1 gene 16 genes 0 species
1 species UBERON:0001532011601
1st arch mandibular component 1.0045.661 gene 0 gene
16 genes 1 species 0 species
UBERON:0007237101610
myelencephalon 1.0070.001 gene 0 gene
16 genes 1 species 0 species
UBERON:0005290101610
endocardial endothelium -1.0012.040 gene
1 gene 16 genes 0 species
1 species UBERON:0005316011601
Ammon's horn -0.5032.431 gene 3 genes 13 genes 1 species 3 species UBERON:0001954131313
epiblast (generic) -1.0037.430 gene
1 gene 16 genes 0 species
1 species UBERON:0002532011601
adrenal cortex -1.006.010 gene
1 gene 16 genes 0 species
1 species UBERON:0001235011601
sternocleidomastoid -1.0052.320 gene
1 gene 16 genes 0 species
1 species UBERON:0001128011601
brainstem 0.0038.792 genes 2 genes 13 genes 2 species 2 species UBERON:0002298221322
aorta -0.3339.731 gene 2 genes 14 genes 1 species 2 species UBERON:0000947121412
right kidney -1.0015.290 gene
1 gene 16 genes 0 species
1 species UBERON:0004539011601
somite -1.0044.750 gene
2 genes 15 genes 0 species
1 species UBERON:0002329021501
retina 0.2042.333 genes 2 genes 12 genes 2 species 2 species UBERON:0000966321222
intestine 0.2032.233 genes 2 genes 12 genes 3 species 1 species UBERON:0000160321231
esophagus -1.0025.370 gene
4 genes 13 genes 0 species
4 species UBERON:0001043041304
blastula 0.3343.852 genes 1 gene 14 genes 1 species 1 species UBERON:0000307211411
right testis 1.0042.611 gene 0 gene
16 genes 1 species 0 species
UBERON:0004534101610
blood -1.0041.780 gene
8 genes 9 genes 0 species
8 species UBERON:000017808908
adipose tissue -0.6039.101 gene 4 genes 12 genes 1 species 4 species UBERON:0001013141214
kidney blood vessel -1.0063.320 gene
1 gene 16 genes 0 species
1 species UBERON:0003517011601
embryonic head 1.0038.252 genes 0 gene
15 genes 2 species 0 species
UBERON:0008816201520
skeletal muscle tissue 0.0953.666 genes 5 genes 6 genes 6 species 5 species UBERON:000113465665
spleen -0.6037.552 genes 8 genes 7 genes 2 species 7 species UBERON:000210628727
kidney -0.8342.641 gene 11 genes 5 genes 1 species 10 species UBERON:00021131115110
lung, swim bladder -0.8336.941 gene 11 genes 5 genes 1 species 10 species UBERON:0002048, UBERON:00068601115110
cardiac atrium -1.0041.700 gene
2 genes 15 genes 0 species
2 species UBERON:0002081021502
ventral horn of spinal cord 1.0038.711 gene 0 gene
16 genes 1 species 0 species
UBERON:0002257101610
metencephalon 1.0057.984 genes 0 gene
13 genes 3 species 0 species
UBERON:0001895401330
islet of Langerhans -1.0034.070 gene
2 genes 15 genes 0 species
2 species UBERON:0000006021502
neural tube 1.0069.943 genes 0 gene
14 genes 2 species 0 species
UBERON:0001049301420
endocardial cushion -1.0039.650 gene
1 gene 16 genes 0 species
1 species UBERON:0002062011601
cerebral hemisphere 1.0038.934 genes 0 gene
13 genes 4 species 0 species
UBERON:0001869401340
pigmented layer of retina -1.0037.830 gene
1 gene 16 genes 0 species
1 species UBERON:0001782011601
future forebrain 1.0066.663 genes 0 gene
14 genes 2 species 0 species
UBERON:0006240301420
1st arch maxillary component -1.0041.060 gene
1 gene 16 genes 0 species
1 species UBERON:0007238011601
cerebellar cortex -1.0025.860 gene
2 genes 15 genes 0 species
2 species UBERON:0002129021502
cranial ganglion -1.0065.370 gene
1 gene 16 genes 0 species
1 species UBERON:0001714011601
heart -0.2939.555 genes 9 genes 3 genes 5 species 9 species UBERON:000094859359
liver -0.5039.474 genes 12 genes 1 gene 4 species 12 species UBERON:00021074121412
colon -0.4332.782 genes 5 genes 10 genes 2 species 5 species UBERON:0001155251025
left testis 1.0040.591 gene 0 gene
16 genes 1 species 0 species
UBERON:0004533101610
muscle organ 0.6033.178 genes 2 genes 7 genes 8 species 1 species UBERON:000163082781
striatum 1.0038.761 gene 0 gene
16 genes 1 species 0 species
UBERON:0002435101610
myocardium of ventricle -1.0052.250 gene
1 gene 16 genes 0 species
1 species UBERON:0001083011601
neurohypophysis -1.009.580 gene
1 gene 16 genes 0 species
1 species UBERON:0002198011601
presomitic mesoderm -1.0044.770 gene
3 genes 14 genes 0 species
2 species UBERON:0003059031402
olfactory epithelium -1.0038.600 gene
1 gene 16 genes 0 species
1 species UBERON:0001997011601
olfactory placode 1.0055.142 genes 0 gene
15 genes 1 species 0 species
UBERON:0003050201510
dorsal root ganglion -1.0037.980 gene
1 gene 16 genes 0 species
1 species UBERON:0000044011601
aortic valve -1.0042.310 gene
1 gene 16 genes 0 species
1 species UBERON:0002137011601
ciliary body -1.0037.490 gene
1 gene 16 genes 0 species
1 species UBERON:0001775011601
ear vesicle -1.0039.800 gene
1 gene 16 genes 0 species
1 species UBERON:0003051011601
gall bladder -1.0021.990 gene
2 genes 15 genes 0 species
2 species UBERON:0002110021502
atrioventricular valve -1.0039.640 gene
1 gene 16 genes 0 species
1 species UBERON:0002133011601
parathyroid gland, pharyngeal gill -1.0013.520 gene
2 genes 15 genes 0 species
1 species UBERON:0001132, UBERON:0000206021501
zygote -1.0057.170 gene
1 gene 16 genes 0 species
1 species CL:0000365011601
medulla oblongata 0.0084.841 gene 1 gene 15 genes 1 species 1 species UBERON:0001896111511
caudate nucleus -1.0020.210 gene
1 gene 16 genes 0 species
1 species UBERON:0001873011601
embryo 1.0080.6810 genes 0 gene
7 genes 9 species 0 species
UBERON:0000922100790
rhombomere 1.0059.062 genes 0 gene
15 genes 2 species 0 species
UBERON:0001892201520
left ovary -1.0018.510 gene
1 gene 16 genes 0 species
1 species UBERON:0002119011601

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