We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 0.0059.701 gene 1 gene 14 genes 1 species 1 species UBERON:0002206111411
optic fissure 0.0063.701 gene 1 gene 14 genes 1 species 1 species UBERON:0005412111411
chordate pharynx -1.0057.880 gene
1 gene 15 genes 0 species
1 species UBERON:0001042011501
postcranial axial skeleton -1.0053.710 gene
1 gene 15 genes 0 species
1 species UBERON:0002090011501
semi-lunar valve 0.0056.731 gene 1 gene 14 genes 1 species 1 species UBERON:0005623111411
brain blood vessel 0.0062.001 gene 1 gene 14 genes 1 species 1 species UBERON:0003499111411
hindlimb, pelvic fin 1.0054.972 genes 0 gene
14 genes 2 species 0 species
UBERON:0002103, UBERON:0000152201420
hypothalamus 0.0070.682 genes 2 genes 12 genes 2 species 2 species UBERON:0001898221222
nervous system 1.0053.6812 genes 0 gene
4 genes 11 species 0 species
UBERON:00010161204110
gastrula 0.5068.573 genes 1 gene 12 genes 3 species 1 species UBERON:0004734311231
otic placode 1.0055.611 gene 0 gene
15 genes 1 species 0 species
UBERON:0003069101510
cleaving embryo 0.0063.341 gene 1 gene 14 genes 1 species 1 species UBERON:0007010111411
retinal neural layer 0.0055.911 gene 1 gene 14 genes 1 species 1 species UBERON:0003902111411
midbrain 0.0081.581 gene 1 gene 14 genes 1 species 1 species UBERON:0001891111411
cornea 0.0055.111 gene 1 gene 14 genes 1 species 1 species UBERON:0000964111411
hindbrain 0.7182.916 genes 1 gene 9 genes 6 species 1 species UBERON:000202861961
cranial nerve II 1.0041.101 gene 0 gene
15 genes 1 species 0 species
UBERON:0000941101510
stomach 0.2070.923 genes 2 genes 11 genes 3 species 2 species UBERON:0000945321132
pituitary gland 0.0082.702 genes 2 genes 12 genes 2 species 2 species UBERON:0000007221222
pancreas 0.6061.634 genes 1 gene 11 genes 3 species 1 species UBERON:0001264411131
extra-ocular muscle 0.0069.161 gene 1 gene 14 genes 1 species 1 species UBERON:0001601111411
limb, paired fin 0.6077.544 genes 1 gene 11 genes 4 species 1 species UBERON:0002101, UBERON:0002534411141
manus, pectoral fin radial bone 1.0064.341 gene 0 gene
15 genes 1 species 0 species
UBERON:0002398, UBERON:2001586101510
face 1.0060.705 genes 0 gene
11 genes 5 species 0 species
UBERON:0001456501150
blood vessel 1.0058.312 genes 0 gene
14 genes 2 species 0 species
UBERON:0001981201420
telencephalon 0.7569.357 genes 1 gene 8 genes 6 species 1 species UBERON:000189371861
utricle of membranous labyrinth 1.0058.321 gene 0 gene
15 genes 1 species 0 species
UBERON:0001853101510
eyeball of camera-type eye 0.5057.713 genes 1 gene 12 genes 3 species 1 species UBERON:0010230311231
testis 0.8899.5115 genes 1 gene 0 gene
12 species 1 species UBERON:00004731510121
male reproductive system 1.0061.9015 genes 0 gene
1 gene 12 species 0 species
UBERON:00000791501120
autopod skin 0.0084.451 gene 1 gene 14 genes 1 species 1 species UBERON:0015790111411
multi-cellular organism 1.0076.7316 genes 0 gene
0 gene
13 species 0 species
UBERON:00004681600130
ventricular zone 0.0078.041 gene 1 gene 14 genes 1 species 1 species UBERON:0003053111411
skin epidermis 0.3362.512 genes 1 gene 13 genes 2 species 1 species UBERON:0001003211321
embryonic post-anal tail -0.3380.521 gene 2 genes 13 genes 1 species 2 species UBERON:0007144121312
peripheral nervous system 1.0059.591 gene 0 gene
15 genes 1 species 0 species
UBERON:0000010101510
central nervous system 0.8559.6112 genes 1 gene 3 genes 11 species 1 species UBERON:00010171213111
fibroblast 0.3376.102 genes 1 gene 13 genes 2 species 1 species CL:0000057211321
mesonephros 1.0036.503 genes 0 gene
13 genes 3 species 0 species
UBERON:0000080301330
iris 0.0066.451 gene 1 gene 14 genes 1 species 1 species UBERON:0001769111411
head 1.0077.497 genes 0 gene
9 genes 6 species 0 species
UBERON:000003370960
choroid plexus epithelium 0.0070.721 gene 1 gene 14 genes 1 species 1 species UBERON:0003911111411
trigeminal ganglion 0.0065.441 gene 1 gene 14 genes 1 species 1 species UBERON:0001675111411
forebrain 0.7575.637 genes 1 gene 8 genes 6 species 1 species UBERON:000189071861
olfactory bulb 0.3371.042 genes 1 gene 13 genes 2 species 1 species UBERON:0002264211321
heart left ventricle, primary heart field 0.0073.492 genes 2 genes 12 genes 2 species 2 species UBERON:0002084, UBERON:0004140221222
diencephalon 1.0053.912 genes 0 gene
14 genes 2 species 0 species
UBERON:0001894201420
lens of camera-type eye 0.0069.241 gene 1 gene 14 genes 1 species 1 species UBERON:0000965111411
ear 0.3376.812 genes 1 gene 13 genes 2 species 1 species UBERON:0001690211321
brain 0.5085.9412 genes 4 genes 0 gene
11 species 4 species UBERON:00009551240114
collection of basal ganglia 1.0066.651 gene 0 gene
15 genes 1 species 0 species
UBERON:0010011101510
smooth muscle tissue 0.5083.303 genes 1 gene 12 genes 3 species 1 species UBERON:0001135311231
heart right ventricle 1.0075.452 genes 0 gene
14 genes 2 species 0 species
UBERON:0002080201420
lip 1.0081.852 genes 0 gene
14 genes 1 species 0 species
UBERON:0001833201410
gonad 1.0061.5216 genes 0 gene
0 gene
13 species 0 species
UBERON:00009911600130
female gonad 0.4389.1510 genes 4 genes 2 genes 10 species 4 species UBERON:00009921042104
internal ear 1.0051.441 gene 0 gene
15 genes 1 species 0 species
UBERON:0001846101510
ileum 0.0064.592 genes 2 genes 12 genes 2 species 2 species UBERON:0002116221222
mitral valve 1.0046.641 gene 0 gene
15 genes 1 species 0 species
UBERON:0002135101510
mouth 1.0065.704 genes 0 gene
12 genes 3 species 0 species
UBERON:0000165401230
cartilage tissue 1.0068.242 genes 0 gene
14 genes 2 species 0 species
UBERON:0002418201420
blastopore, primitive streak 0.0065.671 gene 1 gene 14 genes 1 species 1 species UBERON:0000100, UBERON:0004341111411
thyroid gland -0.3378.021 gene 2 genes 13 genes 1 species 2 species UBERON:0002046121312
midbrain tegmentum 1.0060.851 gene 0 gene
15 genes 1 species 0 species
UBERON:0001943101510
larva 1.0066.741 gene 0 gene
15 genes 1 species 0 species
UBERON:0002548101510
bone element 0.6058.594 genes 1 gene 11 genes 4 species 1 species UBERON:0001474411141
cerebellum 0.2087.626 genes 4 genes 6 genes 6 species 4 species UBERON:000203764664
pineal body 0.0062.041 gene 1 gene 14 genes 1 species 1 species UBERON:0001905111411
dermis 0.0056.421 gene 1 gene 14 genes 1 species 1 species UBERON:0002067111411
cardiac ventricle 0.3365.842 genes 1 gene 13 genes 2 species 1 species UBERON:0002082211321
outflow tract 0.3367.882 genes 1 gene 13 genes 2 species 1 species UBERON:0004145211321
saccule of membranous labyrinth 1.0051.661 gene 0 gene
15 genes 1 species 0 species
UBERON:0001854101510
camera-type eye 0.5061.853 genes 1 gene 12 genes 3 species 1 species UBERON:0000019311231
caudal tuberculum, substantia nigra 0.0059.101 gene 1 gene 14 genes 1 species 1 species UBERON:2000633, UBERON:0002038111411
choroid plexus 1.0062.751 gene 0 gene
15 genes 1 species 0 species
UBERON:0001886101510
thymus 0.2067.923 genes 2 genes 11 genes 3 species 2 species UBERON:0002370321132
forelimb, pectoral fin 1.0070.822 genes 0 gene
14 genes 2 species 0 species
UBERON:0002102, UBERON:0000151201420
motor neuron -1.0042.030 gene
1 gene 15 genes 0 species
1 species CL:0000100011501
epithelium of lens 0.0039.681 gene 1 gene 14 genes 1 species 1 species UBERON:0001803111411
olfactory cortex 1.0056.241 gene 0 gene
15 genes 1 species 0 species
UBERON:0002894101510
right cardiac atrium 1.0063.741 gene 0 gene
15 genes 1 species 0 species
UBERON:0002078101510
internal carotid artery -1.0054.180 gene
2 genes 14 genes 0 species
1 species UBERON:0001532021401
1st arch mandibular component 0.0065.181 gene 1 gene 14 genes 1 species 1 species UBERON:0007237111411
calcareous tooth -1.0063.140 gene
1 gene 15 genes 0 species
1 species UBERON:0001091011501
Ammon's horn 0.0074.511 gene 1 gene 14 genes 1 species 1 species UBERON:0001954111411
epiblast (generic) 0.0068.871 gene 1 gene 14 genes 1 species 1 species UBERON:0002532111411
adrenal cortex 1.0061.361 gene 0 gene
15 genes 1 species 0 species
UBERON:0001235101510
sternocleidomastoid 0.0065.391 gene 1 gene 14 genes 1 species 1 species UBERON:0001128111411
brainstem -0.3356.061 gene 2 genes 13 genes 1 species 2 species UBERON:0002298121312
aorta 0.0075.432 genes 2 genes 12 genes 2 species 2 species UBERON:0000947221222
right kidney 0.0075.131 gene 1 gene 14 genes 1 species 1 species UBERON:0004539111411
retina 0.0056.472 genes 2 genes 12 genes 2 species 2 species UBERON:0000966221222
somite 1.0041.231 gene 0 gene
15 genes 1 species 0 species
UBERON:0002329101510
intestine 0.6766.745 genes 1 gene 10 genes 5 species 1 species UBERON:0000160511051
esophagus 0.0070.822 genes 2 genes 12 genes 2 species 2 species UBERON:0001043221222
blastula 1.0062.274 genes 0 gene
12 genes 4 species 0 species
UBERON:0000307401240
blood 0.5084.926 genes 2 genes 8 genes 6 species 2 species UBERON:000017862862
adipose tissue 0.3357.192 genes 1 gene 13 genes 2 species 1 species UBERON:0001013211321
embryonic head 1.0057.162 genes 0 gene
14 genes 2 species 0 species
UBERON:0008816201420
skeletal muscle tissue 0.4589.828 genes 3 genes 5 genes 7 species 3 species UBERON:000113483573
integumental system 1.0055.147 genes 0 gene
9 genes 7 species 0 species
UBERON:000241670970
cardiovascular system 1.0055.1414 genes 0 gene
2 genes 11 species 0 species
UBERON:00045351402110
spleen 0.7572.897 genes 1 gene 8 genes 6 species 1 species UBERON:000210671861
kidney 0.6090.7612 genes 3 genes 1 gene 12 species 3 species UBERON:00021131231123
intestinal epithelium 1.0041.671 gene 0 gene
15 genes 1 species 0 species
UBERON:0001277101510
lung, swim bladder 0.4588.128 genes 3 genes 5 genes 7 species 3 species UBERON:0002048, UBERON:000686083573
cardiac atrium 0.3364.032 genes 1 gene 13 genes 2 species 1 species UBERON:0002081211321
ventral horn of spinal cord 0.0054.261 gene 1 gene 14 genes 1 species 1 species UBERON:0002257111411
islet of Langerhans 1.0079.882 genes 0 gene
14 genes 1 species 0 species
UBERON:0000006201410
neural tube 0.0082.031 gene 1 gene 14 genes 1 species 1 species UBERON:0001049111411
endocardial cushion 0.0059.391 gene 1 gene 14 genes 1 species 1 species UBERON:0002062111411
cerebral hemisphere 0.7565.207 genes 1 gene 8 genes 6 species 1 species UBERON:000186971861
appendicular skeleton 1.0063.631 gene 0 gene
15 genes 1 species 0 species
UBERON:0002091101510
pigmented layer of retina 0.0064.041 gene 1 gene 14 genes 1 species 1 species UBERON:0001782111411
1st arch maxillary component 0.0065.801 gene 1 gene 14 genes 1 species 1 species UBERON:0007238111411
cerebellar cortex 0.0070.181 gene 1 gene 14 genes 1 species 1 species UBERON:0002129111411
cranial ganglion 1.0069.211 gene 0 gene
15 genes 1 species 0 species
UBERON:0001714101510
heart 0.8683.4313 genes 1 gene 2 genes 10 species 1 species UBERON:00009481312101
liver 0.3873.0411 genes 5 genes 0 gene
11 species 5 species UBERON:00021071150115
cranium 1.0053.531 gene 0 gene
15 genes 1 species 0 species
UBERON:0003128101510
colon 0.3367.394 genes 2 genes 10 genes 4 species 2 species UBERON:0001155421042
muscle organ 1.0057.0310 genes 0 gene
6 genes 9 species 0 species
UBERON:0001630100690
striatum 0.0067.241 gene 1 gene 14 genes 1 species 1 species UBERON:0002435111411
myocardium of ventricle 0.3382.792 genes 1 gene 13 genes 2 species 1 species UBERON:0001083211321
presomitic mesoderm 0.0056.911 gene 1 gene 14 genes 1 species 1 species UBERON:0003059111411
olfactory epithelium 0.0066.371 gene 1 gene 14 genes 1 species 1 species UBERON:0001997111411
meninx 1.0073.671 gene 0 gene
15 genes 1 species 0 species
UBERON:0002360101510
dorsal root ganglion 0.0061.421 gene 1 gene 14 genes 1 species 1 species UBERON:0000044111411
aortic valve 0.0051.251 gene 1 gene 14 genes 1 species 1 species UBERON:0002137111411
ciliary body -1.0062.360 gene
2 genes 14 genes 0 species
1 species UBERON:0001775021401
ear vesicle 0.0053.881 gene 1 gene 14 genes 1 species 1 species UBERON:0003051111411
musculature 1.0065.3810 genes 0 gene
6 genes 9 species 0 species
UBERON:0001015100690
atrioventricular valve 0.3359.142 genes 1 gene 13 genes 2 species 1 species UBERON:0002133211321
parathyroid gland, pharyngeal gill 1.0061.131 gene 0 gene
15 genes 1 species 0 species
UBERON:0001132, UBERON:0000206101510
renal system 1.0075.3211 genes 0 gene
5 genes 11 species 0 species
UBERON:00010081105110
zygote 0.0093.031 gene 1 gene 14 genes 1 species 1 species CL:0000365111411
respiratory system 1.0055.539 genes 0 gene
7 genes 8 species 0 species
UBERON:000100490780
medulla oblongata 1.0051.481 gene 0 gene
15 genes 1 species 0 species
UBERON:0001896101510
embryo 0.6091.008 genes 2 genes 6 genes 8 species 2 species UBERON:000092282682

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