We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
female gonad 1.0059.6710 genes 0 gene
6 genes 10 species 0 species
UBERON:00009921006100
neurohypophysis 1.0050.932 genes 0 gene
14 genes 2 species 0 species
UBERON:0002198201420
aortic valve 1.0053.641 gene 0 gene
15 genes 1 species 0 species
UBERON:0002137101510
embryo 1.0081.478 genes 0 gene
8 genes 8 species 0 species
UBERON:000092280880
adipose tissue 1.0074.005 genes 0 gene
11 genes 5 species 0 species
UBERON:0001013501150
dorsal root ganglion 1.0086.362 genes 0 gene
14 genes 2 species 0 species
UBERON:0000044201420
vertebral column -1.0046.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001130011501
internal carotid artery 1.0076.451 gene 0 gene
15 genes 1 species 0 species
UBERON:0001532101510
thymus 1.0083.694 genes 0 gene
12 genes 4 species 0 species
UBERON:0002370401240
aorta 1.0087.694 genes 0 gene
12 genes 4 species 0 species
UBERON:0000947401240
parotid gland 1.0061.672 genes 0 gene
14 genes 2 species 0 species
UBERON:0001831201420
tendon 1.0049.981 gene 0 gene
15 genes 1 species 0 species
UBERON:0000043101510
cardiac atrium 0.3386.342 genes 1 gene 13 genes 2 species 1 species UBERON:0002081211321
metanephric ureteric bud 1.0051.531 gene 0 gene
15 genes 1 species 0 species
UBERON:0005080101510
head 1.0066.846 genes 0 gene
10 genes 6 species 0 species
UBERON:0000033601060
globus pallidus 0.0088.241 gene 1 gene 14 genes 1 species 1 species UBERON:0001875111411
ureter smooth muscle -1.0040.550 gene
1 gene 15 genes 0 species
1 species UBERON:0009919011501
renal corpuscle 1.0039.912 genes 0 gene
14 genes 2 species 0 species
UBERON:0001229201420
lung 1.0073.8710 genes 0 gene
6 genes 10 species 0 species
UBERON:00020481006100
cerebral hemisphere 1.0054.5613 genes 0 gene
3 genes 13 species 0 species
UBERON:00018691303130
intestinal epithelium -1.0041.670 gene
1 gene 15 genes 0 species
1 species UBERON:0001277011501
Wulst, primary visual cortex 1.0078.284 genes 0 gene
12 genes 4 species 0 species
UBERON:0014756, UBERON:0002436401240
inferior vagus X ganglion 1.0089.231 gene 0 gene
15 genes 1 species 0 species
UBERON:0005363101510
stomach 0.6062.134 genes 1 gene 11 genes 4 species 1 species UBERON:0000945411141
ciliary body -1.0048.410 gene
1 gene 15 genes 0 species
1 species UBERON:0001775011501
male reproductive system 1.0063.4815 genes 0 gene
1 gene 15 species 0 species
UBERON:00000791501150
presomitic mesoderm 1.0056.381 gene 0 gene
15 genes 1 species 0 species
UBERON:0003059101510
testis 0.8866.7215 genes 1 gene 0 gene
15 species 1 species UBERON:00004731510151
eyeball of camera-type eye 1.0038.604 genes 0 gene
12 genes 4 species 0 species
UBERON:0010230401240
caudate nucleus 1.0074.321 gene 0 gene
15 genes 1 species 0 species
UBERON:0001873101510
medulla oblongata 0.3389.132 genes 1 gene 13 genes 2 species 1 species UBERON:0001896211321
adrenal gland 1.0074.854 genes 0 gene
12 genes 4 species 0 species
UBERON:0002369401240
gingiva 1.0064.571 gene 0 gene
15 genes 1 species 0 species
UBERON:0001828101510
cranial nerve II 1.0076.602 genes 0 gene
14 genes 2 species 0 species
UBERON:0000941201420
pituitary gland 0.6773.595 genes 1 gene 10 genes 5 species 1 species UBERON:0000007511051
milk 1.0047.421 gene 0 gene
15 genes 1 species 0 species
UBERON:0001913101510
heart 0.8666.3013 genes 1 gene 2 genes 13 species 1 species UBERON:00009481312131
autopod skin 1.0037.301 gene 0 gene
15 genes 1 species 0 species
UBERON:0015790101510
skin of leg 1.0073.671 gene 0 gene
15 genes 1 species 0 species
UBERON:0001511101510
epithelial cell of pancreas 1.0072.691 gene 0 gene
15 genes 1 species 0 species
CL:0000083101510
colon 0.7569.137 genes 1 gene 8 genes 7 species 1 species UBERON:000115571871
laryngeal cartilage 1.0069.951 gene 0 gene
15 genes 1 species 0 species
UBERON:0001739101510
synovial membrane of synovial joint 1.0066.851 gene 0 gene
15 genes 1 species 0 species
UBERON:0002018101510
hypothalamus 1.0082.775 genes 0 gene
11 genes 5 species 0 species
UBERON:0001898501150
saliva-secreting gland 1.0075.253 genes 0 gene
13 genes 3 species 0 species
UBERON:0001044301330
ear vesicle 1.0061.371 gene 0 gene
15 genes 1 species 0 species
UBERON:0003051101510
utricle of membranous labyrinth -1.0038.440 gene
1 gene 15 genes 0 species
1 species UBERON:0001853011501
metanephric glomerulus 1.0071.481 gene 0 gene
15 genes 1 species 0 species
UBERON:0004736101510
myocardium of ventricle 0.0039.701 gene 1 gene 14 genes 1 species 1 species UBERON:0001083111411
substantia nigra 1.0078.822 genes 0 gene
14 genes 2 species 0 species
UBERON:0002038201420
camera-type eye 1.0052.234 genes 0 gene
12 genes 4 species 0 species
UBERON:0000019401240
skin of hip 1.0071.181 gene 0 gene
15 genes 1 species 0 species
UBERON:0001554101510
olfactory epithelium 1.0060.991 gene 0 gene
15 genes 1 species 0 species
UBERON:0001997101510
anterior leaflet of mitral valve, atrioventricular valve, tricuspid valve cusp -1.0039.640 gene
1 gene 15 genes 0 species
1 species UBERON:0014854, UBERON:0002133, UBERON:0005998011501
infraspinatus muscle, supracoracoideus muscle, supraspinatus muscle 1.0054.271 gene 0 gene
15 genes 1 species 0 species
UBERON:0001477, UBERON:0014840, UBERON:0002383101510
otic placode 1.0047.581 gene 0 gene
15 genes 1 species 0 species
UBERON:0003069101510
left ovary 1.0069.271 gene 0 gene
15 genes 1 species 0 species
UBERON:0002119101510
ear 1.0056.182 genes 0 gene
14 genes 2 species 0 species
UBERON:0001690201420
putamen 1.0074.681 gene 0 gene
15 genes 1 species 0 species
UBERON:0001874101510
skin of external ear 1.0051.121 gene 0 gene
15 genes 1 species 0 species
UBERON:0001459101510
bronchus 1.0090.312 genes 0 gene
14 genes 2 species 0 species
UBERON:0002185201420
mammillary body 1.0041.271 gene 0 gene
15 genes 1 species 0 species
UBERON:0002206101510
optic fissure 1.0042.781 gene 0 gene
15 genes 1 species 0 species
UBERON:0005412101510
midbrain 1.0088.462 genes 0 gene
14 genes 2 species 0 species
UBERON:0001891201420
urinary bladder 1.0074.923 genes 0 gene
13 genes 3 species 0 species
UBERON:0001255301330
limb 1.0075.759 genes 0 gene
7 genes 9 species 0 species
UBERON:000210190790
skin epidermis 1.0050.732 genes 0 gene
14 genes 2 species 0 species
UBERON:0001003201420
metanephric collecting duct 1.0042.421 gene 0 gene
15 genes 1 species 0 species
UBERON:0004737101510
fibroblast 0.5062.273 genes 1 gene 12 genes 3 species 1 species CL:0000057311231
spleen 1.0085.769 genes 0 gene
7 genes 9 species 0 species
UBERON:000210690790
large intestine 1.0065.567 genes 0 gene
9 genes 7 species 0 species
UBERON:000005970970
kidney 1.0072.9816 genes 0 gene
0 gene
16 species 0 species
UBERON:00021131600160
kidney epithelium 1.0083.302 genes 0 gene
14 genes 2 species 0 species
UBERON:0004819201420
amygdala 0.3377.872 genes 1 gene 13 genes 2 species 1 species UBERON:0001876211321
female reproductive system 1.0089.0613 genes 0 gene
3 genes 13 species 0 species
UBERON:00004741303130
embryonic head 1.0038.512 genes 0 gene
14 genes 2 species 0 species
UBERON:0008816201420
epithelium of bronchus 1.0085.042 genes 0 gene
14 genes 2 species 0 species
UBERON:0002031201420
right ovary 1.0070.991 gene 0 gene
15 genes 1 species 0 species
UBERON:0002118101510
forebrain 1.0071.5113 genes 0 gene
3 genes 13 species 0 species
UBERON:00018901303130
ventral horn of spinal cord 1.0057.691 gene 0 gene
15 genes 1 species 0 species
UBERON:0002257101510
internal ear 1.0066.951 gene 0 gene
15 genes 1 species 0 species
UBERON:0001846101510
duodenum 0.6073.544 genes 1 gene 11 genes 4 species 1 species UBERON:0002114411141
primitive streak 1.0061.431 gene 0 gene
15 genes 1 species 0 species
UBERON:0004341101510
bone element 1.0051.375 genes 0 gene
11 genes 5 species 0 species
UBERON:0001474501150
brain blood vessel 1.0054.651 gene 0 gene
15 genes 1 species 0 species
UBERON:0003499101510
ventricular zone 1.0082.022 genes 0 gene
14 genes 2 species 0 species
UBERON:0003053201420
embryonic post-anal tail 1.0078.281 gene 0 gene
15 genes 1 species 0 species
UBERON:0007144101510
seminiferous tubule of testis 1.0056.721 gene 0 gene
15 genes 1 species 0 species
UBERON:0001343101510
epithelium of lens -1.0048.270 gene
1 gene 15 genes 0 species
1 species UBERON:0001803011501
motor neuron -1.0042.030 gene
1 gene 15 genes 0 species
1 species CL:0000100011501
multi-cellular organism 1.0074.9716 genes 0 gene
0 gene
16 species 0 species
UBERON:00004681600160
amniotic fluid 1.0067.871 gene 0 gene
15 genes 1 species 0 species
UBERON:0000173101510
right kidney 1.0061.831 gene 0 gene
15 genes 1 species 0 species
UBERON:0004539101510
upper arm skin 1.0076.361 gene 0 gene
15 genes 1 species 0 species
UBERON:0004263101510
myocardium 1.0066.911 gene 0 gene
15 genes 1 species 0 species
UBERON:0002349101510
fundus of stomach 1.0076.651 gene 0 gene
15 genes 1 species 0 species
UBERON:0001160101510
jejunum 1.0092.324 genes 0 gene
12 genes 4 species 0 species
UBERON:0002115401240
adenohypophysis 1.0072.482 genes 0 gene
14 genes 2 species 0 species
UBERON:0002196201420
male germ cell 1.0089.304 genes 0 gene
12 genes 4 species 0 species
CL:0000015401240
bone marrow 1.0078.375 genes 0 gene
11 genes 5 species 0 species
UBERON:0002371501150
thyroid gland 1.0074.543 genes 0 gene
13 genes 3 species 0 species
UBERON:0002046301330
gall bladder 1.0071.622 genes 0 gene
14 genes 2 species 0 species
UBERON:0002110201420
intestine 1.0063.727 genes 0 gene
9 genes 7 species 0 species
UBERON:000016070970
penis 0.0081.761 gene 1 gene 14 genes 1 species 1 species UBERON:0000989111411
choroid plexus 0.0023.421 gene 1 gene 14 genes 1 species 1 species UBERON:0001886111411
smooth muscle tissue 1.0082.932 genes 0 gene
14 genes 2 species 0 species
UBERON:0001135201420
right lobe of thyroid gland 1.0076.081 gene 0 gene
15 genes 1 species 0 species
UBERON:0001119101510
trachea 1.0085.923 genes 0 gene
13 genes 3 species 0 species
UBERON:0003126301330
epithelium of small intestine -1.0058.490 gene
1 gene 15 genes 0 species
1 species UBERON:0001902011501
pes 1.0050.171 gene 0 gene
15 genes 1 species 0 species
UBERON:0002387101510
intercostal muscle 1.0072.652 genes 0 gene
14 genes 2 species 0 species
UBERON:0001111201420
1st arch maxillary component 1.0072.961 gene 0 gene
15 genes 1 species 0 species
UBERON:0007238101510
pericardium 1.0088.291 gene 0 gene
15 genes 1 species 0 species
UBERON:0002407101510
retina 1.0057.973 genes 0 gene
13 genes 3 species 0 species
UBERON:0000966301330
pigmented layer of retina 0.0071.771 gene 1 gene 14 genes 1 species 1 species UBERON:0001782111411
1st arch mandibular component 1.0071.111 gene 0 gene
15 genes 1 species 0 species
UBERON:0007237101510
endocardial cushion -1.0039.650 gene
1 gene 15 genes 0 species
1 species UBERON:0002062011501
striatum 1.0045.462 genes 0 gene
14 genes 2 species 0 species
UBERON:0002435201420
sternocleidomastoid 1.0066.961 gene 0 gene
15 genes 1 species 0 species
UBERON:0001128101510
metanephros 1.0070.002 genes 0 gene
14 genes 2 species 0 species
UBERON:0000081201420
skeletal muscle tissue 1.0093.6710 genes 0 gene
6 genes 10 species 0 species
UBERON:00011341006100
neural tube 1.0081.292 genes 0 gene
14 genes 2 species 0 species
UBERON:0001049201420
vault of skull 1.0055.691 gene 0 gene
15 genes 1 species 0 species
UBERON:0004339101510
gastrula 1.0076.621 gene 0 gene
15 genes 1 species 0 species
UBERON:0004734101510
extra-ocular muscle 1.0056.341 gene 0 gene
15 genes 1 species 0 species
UBERON:0001601101510
cochlea 1.0050.061 gene 0 gene
15 genes 1 species 0 species
UBERON:0001844101510
sciatic nerve 0.0038.881 gene 1 gene 14 genes 1 species 1 species UBERON:0001322111411
muscle organ 1.0089.2311 genes 0 gene
5 genes 11 species 0 species
UBERON:00016301105110
liver 1.0072.3516 genes 0 gene
0 gene
16 species 0 species
UBERON:00021071600160
right testis 1.0067.961 gene 0 gene
15 genes 1 species 0 species
UBERON:0004534101510
adrenal cortex 1.0089.981 gene 0 gene
15 genes 1 species 0 species
UBERON:0001235101510
retinal neural layer 1.0062.241 gene 0 gene
15 genes 1 species 0 species
UBERON:0003902101510
yolk sac 1.0061.741 gene 0 gene
15 genes 1 species 0 species
UBERON:0001040101510
small intestine 1.0074.554 genes 0 gene
12 genes 4 species 0 species
UBERON:0002108401240
tongue 1.0090.352 genes 0 gene
14 genes 2 species 0 species
UBERON:0001723201420
metanephric mesenchyme 1.0052.091 gene 0 gene
15 genes 1 species 0 species
UBERON:0003220101510
zygote 1.0063.031 gene 0 gene
15 genes 1 species 0 species
CL:0000365101510
peritoneum 1.0083.231 gene 0 gene
15 genes 1 species 0 species
UBERON:0002358101510
cerebellar cortex 1.0083.744 genes 0 gene
12 genes 4 species 0 species
UBERON:0002129401240
submandibular gland 1.0065.741 gene 0 gene
15 genes 1 species 0 species
UBERON:0001736101510
epithelium of esophagus 1.0061.511 gene 0 gene
15 genes 1 species 0 species
UBERON:0001976101510
metanephros cortex 0.0024.771 gene 1 gene 14 genes 1 species 1 species UBERON:0010533111411
pancreas 1.0072.463 genes 0 gene
13 genes 3 species 0 species
UBERON:0001264301330
bronchial epithelial cell 1.0078.431 gene 0 gene
15 genes 1 species 0 species
CL:0002328101510
cleaving embryo 1.0050.771 gene 0 gene
15 genes 1 species 0 species
UBERON:0007010101510
heart right ventricle 0.0060.311 gene 1 gene 14 genes 1 species 1 species UBERON:0002080111411
ileum 0.3374.494 genes 2 genes 10 genes 4 species 2 species UBERON:0002116421042
pylorus 1.0090.831 gene 0 gene
15 genes 1 species 0 species
UBERON:0001166101510
telencephalon 1.0081.5113 genes 0 gene
3 genes 13 species 0 species
UBERON:00018931303130
cartilage tissue 1.0078.082 genes 0 gene
14 genes 2 species 0 species
UBERON:0002418201420
mammary duct 1.0081.151 gene 0 gene
15 genes 1 species 0 species
UBERON:0001765101510
periodontal ligament 1.0086.421 gene 0 gene
15 genes 1 species 0 species
UBERON:0008266101510
cornea -1.0044.440 gene
1 gene 15 genes 0 species
1 species UBERON:0000964011501
oviduct shell gland, uterus 1.0084.869 genes 0 gene
7 genes 9 species 0 species
UBERON:0008975, UBERON:000099590790
inferior olivary complex 1.0084.931 gene 0 gene
15 genes 1 species 0 species
UBERON:0002127101510
hindbrain 1.0081.3914 genes 0 gene
2 genes 14 species 0 species
UBERON:00020281402140
left testis 1.0067.691 gene 0 gene
15 genes 1 species 0 species
UBERON:0004533101510
iris -1.0043.540 gene
1 gene 15 genes 0 species
1 species UBERON:0001769011501
gingival epithelium 1.0077.581 gene 0 gene
15 genes 1 species 0 species
UBERON:0001949101510
tongue muscle 1.0059.261 gene 0 gene
15 genes 1 species 0 species
UBERON:0000378101510
pharyngeal arch 1.0084.851 gene 0 gene
15 genes 1 species 0 species
UBERON:0002539101510
central nervous system 1.0065.8416 genes 0 gene
0 gene
16 species 0 species
UBERON:00010171600160
saccule of membranous labyrinth 1.0047.221 gene 0 gene
15 genes 1 species 0 species
UBERON:0001854101510
heart left ventricle 0.5071.223 genes 1 gene 12 genes 3 species 1 species UBERON:0002084311231
left lobe of thyroid gland 1.0075.191 gene 0 gene
15 genes 1 species 0 species
UBERON:0001120101510
pleura 1.0078.901 gene 0 gene
15 genes 1 species 0 species
UBERON:0000977101510
blood 1.0089.307 genes 0 gene
9 genes 7 species 0 species
UBERON:000017870970
upper leg skin 1.0070.621 gene 0 gene
15 genes 1 species 0 species
UBERON:0004262101510
lip 1.0064.961 gene 0 gene
15 genes 1 species 0 species
UBERON:0001833101510
islet of Langerhans 1.0067.722 genes 0 gene
14 genes 2 species 0 species
UBERON:0000006201420
outflow tract 1.0054.841 gene 0 gene
15 genes 1 species 0 species
UBERON:0004145101510
dermis 1.0057.701 gene 0 gene
15 genes 1 species 0 species
UBERON:0002067101510
dentate gyrus of hippocampal formation 1.0041.231 gene 0 gene
15 genes 1 species 0 species
UBERON:0001885101510
carotid body 1.0051.751 gene 0 gene
15 genes 1 species 0 species
UBERON:0001629101510
Ammon's horn 1.0075.356 genes 0 gene
10 genes 6 species 0 species
UBERON:0001954601060
neocortex 1.0086.1613 genes 0 gene
3 genes 13 species 0 species
UBERON:00019501303130
cerebellum 1.0087.1514 genes 0 gene
2 genes 14 species 0 species
UBERON:00020371402140
endocardial endothelium 1.0085.301 gene 0 gene
15 genes 1 species 0 species
UBERON:0005316101510
lens of camera-type eye 1.0060.651 gene 0 gene
15 genes 1 species 0 species
UBERON:0000965101510
semi-lunar valve 1.0053.671 gene 0 gene
15 genes 1 species 0 species
UBERON:0005623101510
somite 1.0065.761 gene 0 gene
15 genes 1 species 0 species
UBERON:0002329101510
oviduct epithelium 0.0042.011 gene 1 gene 14 genes 1 species 1 species UBERON:0004804111411
choroid plexus epithelium 0.0071.551 gene 1 gene 14 genes 1 species 1 species UBERON:0003911111411
esophagus 1.0073.904 genes 0 gene
12 genes 4 species 0 species
UBERON:0001043401240
brain 1.0076.6116 genes 0 gene
0 gene
16 species 0 species
UBERON:00009551600160
cardiac ventricle 1.0089.513 genes 0 gene
13 genes 3 species 0 species
UBERON:0002082301330
brainstem 0.2054.273 genes 2 genes 11 genes 3 species 2 species UBERON:0002298321132
caecum 0.3393.912 genes 1 gene 13 genes 2 species 1 species UBERON:0001153211321
trigeminal ganglion 1.0088.032 genes 0 gene
14 genes 2 species 0 species
UBERON:0001675201420
olfactory bulb 1.0092.132 genes 0 gene
14 genes 2 species 0 species
UBERON:0002264201420
pineal body -1.0047.980 gene
1 gene 15 genes 0 species
1 species UBERON:0001905011501
cerebral cortex 1.0083.2513 genes 0 gene
3 genes 13 species 0 species
UBERON:00009561303130
ureter 1.0057.802 genes 0 gene
14 genes 2 species 0 species
UBERON:0000056201420
manus 1.0055.051 gene 0 gene
15 genes 1 species 0 species
UBERON:0002398101510
epiblast (generic) 1.0062.651 gene 0 gene
15 genes 1 species 0 species
UBERON:0002532101510

Do not show this banner again