We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0069.421 gene 0 gene
18 genes 1 species 0 species
UBERON:0002206101810
vestibulocochlear ganglion 1.0056.221 gene 0 gene
18 genes 1 species 0 species
UBERON:0002827101810
optic fissure -1.0040.620 gene
1 gene 18 genes 0 species
1 species UBERON:0005412011801
epithelial cell of pancreas -1.0066.460 gene
1 gene 18 genes 0 species
1 species CL:0000083011801
semi-lunar valve -1.0037.770 gene
1 gene 18 genes 0 species
1 species UBERON:0005623011801
brain blood vessel 1.0067.181 gene 0 gene
18 genes 1 species 0 species
UBERON:0003499101810
hypothalamus 1.0087.486 genes 0 gene
13 genes 6 species 0 species
UBERON:0001898601360
gingival epithelium -1.0042.370 gene
1 gene 18 genes 0 species
1 species UBERON:0001949011801
gastrula -0.5068.111 gene 3 genes 15 genes 1 species 2 species UBERON:0004734131512
cleaving embryo -1.0043.540 gene
1 gene 18 genes 0 species
1 species UBERON:0007010011801
midbrain 1.0088.212 genes 0 gene
17 genes 2 species 0 species
UBERON:0001891201720
retinal neural layer 1.0081.051 gene 0 gene
18 genes 1 species 0 species
UBERON:0003902101810
cornea 1.0043.951 gene 0 gene
18 genes 1 species 0 species
UBERON:0000964101810
midgut 1.0081.711 gene 0 gene
18 genes 1 species 0 species
UBERON:0001045101810
hindbrain 1.0090.2512 genes 0 gene
7 genes 12 species 0 species
UBERON:00020281207120
stomach 0.6755.565 genes 1 gene 13 genes 5 species 1 species UBERON:0000945511351
pituitary gland 0.1461.194 genes 3 genes 12 genes 4 species 3 species UBERON:0000007431243
inferior vagus X ganglion -1.0041.560 gene
1 gene 18 genes 0 species
1 species UBERON:0005363011801
female reproductive system 1.0041.517 genes 0 gene
12 genes 7 species 0 species
UBERON:0000474701270
kidney epithelium 0.0056.091 gene 1 gene 17 genes 1 species 1 species UBERON:0004819111711
pancreas 0.5090.273 genes 1 gene 15 genes 3 species 1 species UBERON:0001264311531
upper leg skin -1.0043.490 gene
1 gene 18 genes 0 species
1 species UBERON:0004262011801
extra-ocular muscle -1.0031.940 gene
1 gene 18 genes 0 species
1 species UBERON:0001601011801
limb, paired fin 1.0072.626 genes 0 gene
13 genes 6 species 0 species
UBERON:0002101, UBERON:0002534601360
spinal cord mantle layer 1.0081.811 gene 0 gene
18 genes 1 species 0 species
UBERON:0009583101810
manus, pectoral fin radial bone -1.0055.320 gene
1 gene 18 genes 0 species
1 species UBERON:0002398, UBERON:2001586011801
putamen 1.0061.821 gene 0 gene
18 genes 1 species 0 species
UBERON:0001874101810
telencephalon 1.0075.9914 genes 0 gene
5 genes 14 species 0 species
UBERON:00018931405140
utricle of membranous labyrinth -1.0053.780 gene
1 gene 18 genes 0 species
1 species UBERON:0001853011801
eyeball of camera-type eye 1.0054.167 genes 0 gene
12 genes 6 species 0 species
UBERON:0010230701260
right ovary -1.0032.800 gene
1 gene 18 genes 0 species
1 species UBERON:0002118011801
male reproductive system 1.0051.2012 genes 0 gene
7 genes 11 species 0 species
UBERON:00000791207110
testis 0.3378.4212 genes 6 genes 1 gene 11 species 6 species UBERON:00004731261116
autopod skin -1.007.220 gene
1 gene 18 genes 0 species
1 species UBERON:0015790011801
multi-cellular organism 1.0069.9719 genes 0 gene
0 gene
18 species 0 species
UBERON:00004681900180
ventricular zone 1.0055.942 genes 0 gene
17 genes 2 species 0 species
UBERON:0003053201720
skin epidermis 0.0038.631 gene 1 gene 17 genes 1 species 1 species UBERON:0001003111711
embryonic post-anal tail -1.0035.680 gene
2 genes 17 genes 0 species
2 species UBERON:0007144021702
central nervous system 1.0087.6519 genes 0 gene
0 gene
18 species 0 species
UBERON:00010171900180
fibroblast 0.3339.152 genes 1 gene 16 genes 2 species 1 species CL:0000057211621
mesonephros 1.0036.392 genes 0 gene
17 genes 2 species 0 species
UBERON:0000080201720
iris 1.0038.861 gene 0 gene
18 genes 1 species 0 species
UBERON:0001769101810
head 1.0087.3110 genes 0 gene
9 genes 9 species 0 species
UBERON:0000033100990
choroid plexus epithelium 1.0039.041 gene 0 gene
18 genes 1 species 0 species
UBERON:0003911101810
tongue muscle 1.0044.931 gene 0 gene
18 genes 1 species 0 species
UBERON:0000378101810
trigeminal ganglion 1.0067.422 genes 0 gene
17 genes 2 species 0 species
UBERON:0001675201720
forebrain 1.0090.5414 genes 0 gene
5 genes 14 species 0 species
UBERON:00018901405140
vertebral column -1.0046.040 gene
1 gene 18 genes 0 species
1 species UBERON:0001130011801
caecum 0.3353.602 genes 1 gene 16 genes 2 species 1 species UBERON:0001153211621
heart left ventricle, primary heart field -0.6044.391 gene 4 genes 14 genes 1 species 4 species UBERON:0002084, UBERON:0004140141414
diencephalon 1.0074.976 genes 0 gene
13 genes 6 species 0 species
UBERON:0001894601360
olfactory bulb 1.0085.002 genes 0 gene
17 genes 2 species 0 species
UBERON:0002264201720
lens of camera-type eye 1.0062.551 gene 0 gene
18 genes 1 species 0 species
UBERON:0000965101810
ear 1.0049.122 genes 0 gene
17 genes 2 species 0 species
UBERON:0001690201720
brain 1.0097.5119 genes 0 gene
0 gene
18 species 0 species
UBERON:00009551900180
collection of basal ganglia 1.0072.213 genes 0 gene
16 genes 3 species 0 species
UBERON:0010011301630
smooth muscle tissue 1.0066.064 genes 0 gene
15 genes 4 species 0 species
UBERON:0001135401540
upper arm skin -1.0055.580 gene
1 gene 18 genes 0 species
1 species UBERON:0004263011801
heart right ventricle -1.0041.760 gene
2 genes 17 genes 0 species
2 species UBERON:0002080021702
lip -1.0029.910 gene
1 gene 18 genes 0 species
1 species UBERON:0001833011801
skin of hip -1.0043.310 gene
1 gene 18 genes 0 species
1 species UBERON:0001554011801
female gonad -0.2388.895 genes 8 genes 6 genes 5 species 7 species UBERON:000099258657
ileum 0.2047.003 genes 2 genes 14 genes 3 species 2 species UBERON:0002116321432
mitral valve -1.0011.490 gene
1 gene 18 genes 0 species
1 species UBERON:0002135011801
cartilage tissue 0.0042.721 gene 1 gene 17 genes 1 species 1 species UBERON:0002418111711
blastopore, primitive streak -1.0040.630 gene
1 gene 18 genes 0 species
1 species UBERON:0000100, UBERON:0004341011801
thyroid gland 0.5043.473 genes 1 gene 15 genes 3 species 1 species UBERON:0002046311531
adenohypophysis 0.3337.762 genes 1 gene 16 genes 2 species 1 species UBERON:0002196211621
larva 1.0066.222 genes 0 gene
17 genes 1 species 0 species
UBERON:0002548201710
bone element 1.0045.075 genes 0 gene
14 genes 4 species 0 species
UBERON:0001474501440
cerebellum 1.0068.9012 genes 0 gene
7 genes 12 species 0 species
UBERON:00020371207120
fundus of stomach -1.0044.730 gene
1 gene 18 genes 0 species
1 species UBERON:0001160011801
pineal body 1.0057.921 gene 0 gene
18 genes 1 species 0 species
UBERON:0001905101810
dermis 1.0070.061 gene 0 gene
18 genes 1 species 0 species
UBERON:0002067101810
cardiac ventricle 0.0041.791 gene 1 gene 17 genes 1 species 1 species UBERON:0002082111711
outflow tract -1.0043.510 gene
1 gene 18 genes 0 species
1 species UBERON:0004145011801
camera-type eye 1.0049.027 genes 0 gene
12 genes 6 species 0 species
UBERON:0000019701260
caudal tuberculum, substantia nigra 1.0076.412 genes 0 gene
17 genes 2 species 0 species
UBERON:2000633, UBERON:0002038201720
choroid plexus 1.0065.082 genes 0 gene
17 genes 2 species 0 species
UBERON:0001886201720
thymus -0.2044.412 genes 3 genes 14 genes 2 species 3 species UBERON:0002370231423
tendon -1.0041.880 gene
1 gene 18 genes 0 species
1 species UBERON:0000043011801
epithelium of lens 1.0039.681 gene 0 gene
18 genes 1 species 0 species
UBERON:0001803101810
right cardiac atrium 0.008.441 gene 1 gene 17 genes 1 species 1 species UBERON:0002078111711
internal carotid artery -1.0040.890 gene
1 gene 18 genes 0 species
1 species UBERON:0001532011801
1st arch mandibular component -1.0041.150 gene
1 gene 18 genes 0 species
1 species UBERON:0007237011801
endocardial endothelium -1.0016.330 gene
1 gene 18 genes 0 species
1 species UBERON:0005316011801
Ammon's horn 1.0082.776 genes 0 gene
13 genes 6 species 0 species
UBERON:0001954601360
midbrain mantle layer 1.0087.801 gene 0 gene
18 genes 1 species 0 species
UBERON:0009581101810
epiblast (generic) 1.0055.351 gene 0 gene
18 genes 1 species 0 species
UBERON:0002532101810
adrenal cortex 1.0061.112 genes 0 gene
17 genes 2 species 0 species
UBERON:0001235201720
thoracic ganglion 1.0061.751 gene 0 gene
18 genes 1 species 0 species
UBERON:0000961101810
glossopharyngeal ganglion 1.0052.251 gene 0 gene
18 genes 1 species 0 species
UBERON:0001701101810
sternocleidomastoid -1.0045.150 gene
1 gene 18 genes 0 species
1 species UBERON:0001128011801
brainstem 1.0079.044 genes 0 gene
15 genes 4 species 0 species
UBERON:0002298401540
aorta 0.5050.773 genes 1 gene 15 genes 3 species 1 species UBERON:0000947311531
right kidney -1.0015.290 gene
1 gene 18 genes 0 species
1 species UBERON:0004539011801
retina 1.0077.196 genes 0 gene
13 genes 5 species 0 species
UBERON:0000966601350
intestine 0.5073.296 genes 2 genes 11 genes 6 species 1 species UBERON:0000160621161
esophagus 0.5044.633 genes 1 gene 15 genes 3 species 1 species UBERON:0001043311531
myocardium -1.0042.450 gene
1 gene 18 genes 0 species
1 species UBERON:0002349011801
blastula 0.0022.182 genes 2 genes 15 genes 2 species 1 species UBERON:0000307221521
right testis 1.0047.891 gene 0 gene
18 genes 1 species 0 species
UBERON:0004534101810
blood -0.6743.211 gene 5 genes 13 genes 1 species 5 species UBERON:0000178151315
adipose tissue 0.3350.494 genes 2 genes 13 genes 4 species 2 species UBERON:0001013421342
embryonic head 1.0040.952 genes 0 gene
17 genes 2 species 0 species
UBERON:0008816201720
skeletal muscle tissue 0.0045.196 genes 6 genes 7 genes 6 species 6 species UBERON:000113466766
spleen 0.1785.197 genes 5 genes 7 genes 7 species 4 species UBERON:000210675774
kidney 0.3352.7412 genes 6 genes 1 gene 12 species 5 species UBERON:00021131261125
pericardium 0.0041.831 gene 1 gene 17 genes 1 species 1 species UBERON:0002407111711
lung, swim bladder 0.0853.017 genes 6 genes 6 genes 7 species 5 species UBERON:0002048, UBERON:000686076675
cardiac atrium 0.3341.812 genes 1 gene 16 genes 2 species 1 species UBERON:0002081211621
ventral horn of spinal cord 1.0076.151 gene 0 gene
18 genes 1 species 0 species
UBERON:0002257101810
islet of Langerhans 1.0044.252 genes 0 gene
17 genes 2 species 0 species
UBERON:0000006201720
neural tube 1.0090.332 genes 0 gene
17 genes 2 species 0 species
UBERON:0001049201720
endocardial cushion -1.0039.650 gene
1 gene 18 genes 0 species
1 species UBERON:0002062011801
cerebral hemisphere 1.0071.9014 genes 0 gene
5 genes 14 species 0 species
UBERON:00018691405140
pigmented layer of retina 0.0044.131 gene 1 gene 17 genes 1 species 1 species UBERON:0001782111711
1st arch maxillary component -1.0041.060 gene
1 gene 18 genes 0 species
1 species UBERON:0007238011801
vagus X ganglion 1.0056.801 gene 0 gene
18 genes 1 species 0 species
UBERON:0005362101810
cerebellar cortex 1.0073.794 genes 0 gene
15 genes 4 species 0 species
UBERON:0002129401540
heart 0.2953.1311 genes 6 genes 2 genes 11 species 6 species UBERON:00009481162116
liver -0.0546.469 genes 10 genes 0 gene
9 species 9 species UBERON:0002107910099
colon 0.3365.286 genes 3 genes 10 genes 6 species 3 species UBERON:0001155631063
left testis 1.0046.141 gene 0 gene
18 genes 1 species 0 species
UBERON:0004533101810
muscle organ 0.6419.569 genes 2 genes 8 genes 9 species 1 species UBERON:000163092891
striatum 1.0056.652 genes 0 gene
17 genes 2 species 0 species
UBERON:0002435201720
myocardium of ventricle -1.0039.700 gene
1 gene 18 genes 0 species
1 species UBERON:0001083011801
neurohypophysis 1.0048.661 gene 0 gene
18 genes 1 species 0 species
UBERON:0002198101810
presomitic mesoderm -1.0041.430 gene
1 gene 18 genes 0 species
1 species UBERON:0003059011801
olfactory epithelium -1.0038.600 gene
1 gene 18 genes 0 species
1 species UBERON:0001997011801
meninx 1.0078.941 gene 0 gene
18 genes 1 species 0 species
UBERON:0002360101810
dorsal root ganglion 1.0068.992 genes 0 gene
17 genes 2 species 0 species
UBERON:0000044201720
aortic valve -1.0042.310 gene
1 gene 18 genes 0 species
1 species UBERON:0002137011801
ciliary body -1.0037.490 gene
1 gene 18 genes 0 species
1 species UBERON:0001775011801
ear vesicle -1.0039.800 gene
1 gene 18 genes 0 species
1 species UBERON:0003051011801
gall bladder 0.0047.391 gene 1 gene 17 genes 1 species 1 species UBERON:0002110111711
atrioventricular valve -1.0039.640 gene
1 gene 18 genes 0 species
1 species UBERON:0002133011801
parathyroid gland, pharyngeal gill -1.0022.570 gene
2 genes 17 genes 0 species
1 species UBERON:0001132, UBERON:0000206021701
renal system 1.0077.3812 genes 0 gene
7 genes 12 species 0 species
UBERON:00010081207120
gingiva -1.0039.270 gene
1 gene 18 genes 0 species
1 species UBERON:0001828011801
peritoneum 1.0041.411 gene 0 gene
18 genes 1 species 0 species
UBERON:0002358101810
zygote -1.0012.870 gene
1 gene 18 genes 0 species
1 species CL:0000365011801
medulla oblongata 1.0071.953 genes 0 gene
16 genes 3 species 0 species
UBERON:0001896301630
pylorus -1.0041.490 gene
1 gene 18 genes 0 species
1 species UBERON:0001166011801
caudate nucleus 1.0063.411 gene 0 gene
18 genes 1 species 0 species
UBERON:0001873101810
embryo 1.0066.8710 genes 0 gene
9 genes 9 species 0 species
UBERON:0000922100990
left ovary -1.0037.510 gene
1 gene 18 genes 0 species
1 species UBERON:0002119011801

Do not show this banner again