We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0056.940 gene
1 gene 15 genes 0 species
1 species UBERON:0002206011501
optic fissure 1.0054.411 gene 0 gene
15 genes 1 species 0 species
UBERON:0005412101510
semi-lunar valve 1.0055.771 gene 0 gene
15 genes 1 species 0 species
UBERON:0005623101510
brain blood vessel 1.0042.901 gene 0 gene
15 genes 1 species 0 species
UBERON:0003499101510
hypothalamus 1.0090.025 genes 0 gene
11 genes 4 species 0 species
UBERON:0001898501140
paraxial mesoderm 1.0060.612 genes 0 gene
14 genes 2 species 0 species
UBERON:0003077201420
gastrula 0.3377.742 genes 1 gene 13 genes 2 species 1 species UBERON:0004734211321
otic placode 1.0047.581 gene 0 gene
15 genes 1 species 0 species
UBERON:0003069101510
cleaving embryo 1.0078.192 genes 0 gene
14 genes 2 species 0 species
UBERON:0007010201420
midbrain 1.0077.833 genes 0 gene
13 genes 2 species 0 species
UBERON:0001891301320
retinal neural layer 1.0087.861 gene 0 gene
15 genes 1 species 0 species
UBERON:0003902101510
cornea 1.0040.561 gene 0 gene
15 genes 1 species 0 species
UBERON:0000964101510
hindbrain 1.0078.6912 genes 0 gene
4 genes 11 species 0 species
UBERON:00020281204110
cranial nerve II -1.0038.780 gene
1 gene 15 genes 0 species
1 species UBERON:0000941011501
stomach 1.0085.156 genes 0 gene
10 genes 5 species 0 species
UBERON:0000945601050
pituitary gland 1.0092.396 genes 0 gene
10 genes 5 species 0 species
UBERON:0000007601050
pancreas 1.0085.355 genes 0 gene
11 genes 4 species 0 species
UBERON:0001264501140
extra-ocular muscle 1.0058.491 gene 0 gene
15 genes 1 species 0 species
UBERON:0001601101510
limb, paired fin 1.0078.297 genes 0 gene
9 genes 6 species 0 species
UBERON:0002101, UBERON:000253470960
manus, pectoral fin radial bone -1.0040.660 gene
1 gene 15 genes 0 species
1 species UBERON:0002398, UBERON:2001586011501
putamen 1.0087.962 genes 0 gene
14 genes 1 species 0 species
UBERON:0001874201410
telencephalon 1.0043.7611 genes 0 gene
5 genes 10 species 0 species
UBERON:00018931105100
utricle of membranous labyrinth -1.0038.440 gene
1 gene 15 genes 0 species
1 species UBERON:0001853011501
eyeball of camera-type eye 1.0060.745 genes 0 gene
11 genes 5 species 0 species
UBERON:0010230501150
right ovary 1.0088.392 genes 0 gene
14 genes 1 species 0 species
UBERON:0002118201410
testis 0.8891.3115 genes 1 gene 0 gene
14 species 1 species UBERON:00004731510141
male reproductive system 1.0055.7216 genes 0 gene
0 gene
15 species 0 species
UBERON:00000791600150
multi-cellular organism 1.0095.2616 genes 0 gene
0 gene
15 species 0 species
UBERON:00004681600150
ventricular zone 1.0087.623 genes 0 gene
13 genes 2 species 0 species
UBERON:0003053301320
skin epidermis 1.0051.752 genes 0 gene
14 genes 2 species 0 species
UBERON:0001003201420
embryonic post-anal tail 1.0076.342 genes 0 gene
14 genes 2 species 0 species
UBERON:0007144201420
central nervous system 1.0047.3716 genes 0 gene
0 gene
15 species 0 species
UBERON:00010171600150
fibroblast 1.0069.483 genes 0 gene
13 genes 3 species 0 species
CL:0000057301330
mesonephros 1.0052.563 genes 0 gene
13 genes 3 species 0 species
UBERON:0000080301330
iris -1.0047.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001769011501
head 1.0082.059 genes 0 gene
7 genes 8 species 0 species
UBERON:000003390780
choroid plexus epithelium -1.0039.040 gene
1 gene 15 genes 0 species
1 species UBERON:0003911011501
tongue muscle 1.0088.291 gene 0 gene
15 genes 1 species 0 species
UBERON:0000378101510
trigeminal ganglion -1.0048.370 gene
1 gene 15 genes 0 species
1 species UBERON:0001675011501
forebrain 1.0062.3011 genes 0 gene
5 genes 10 species 0 species
UBERON:00018901105100
vertebral column -1.0046.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001130011501
caecum 1.0084.403 genes 0 gene
13 genes 2 species 0 species
UBERON:0001153301320
heart left ventricle, primary heart field 1.0090.524 genes 0 gene
12 genes 3 species 0 species
UBERON:0002084, UBERON:0004140401230
olfactory bulb 1.0083.572 genes 0 gene
14 genes 2 species 0 species
UBERON:0002264201420
lens of camera-type eye 1.0078.901 gene 0 gene
15 genes 1 species 0 species
UBERON:0000965101510
ear 1.0046.562 genes 0 gene
14 genes 2 species 0 species
UBERON:0001690201420
brain 1.0090.5716 genes 0 gene
0 gene
15 species 0 species
UBERON:00009551600150
smooth muscle tissue 1.0092.233 genes 0 gene
13 genes 2 species 0 species
UBERON:0001135301320
heart right ventricle 0.0080.991 gene 1 gene 14 genes 1 species 1 species UBERON:0002080111411
lip 1.0076.781 gene 0 gene
15 genes 1 species 0 species
UBERON:0001833101510
female gonad 1.0094.2911 genes 0 gene
5 genes 10 species 0 species
UBERON:00009921105100
ileum 1.0079.543 genes 0 gene
13 genes 3 species 0 species
UBERON:0002116301330
mitral valve 1.0077.851 gene 0 gene
15 genes 1 species 0 species
UBERON:0002135101510
cartilage tissue 1.0082.122 genes 0 gene
14 genes 2 species 0 species
UBERON:0002418201420
blastopore, primitive streak 1.0059.341 gene 0 gene
15 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101510
thyroid gland 1.0092.074 genes 0 gene
12 genes 3 species 0 species
UBERON:0002046401230
adenohypophysis 1.0092.093 genes 0 gene
13 genes 2 species 0 species
UBERON:0002196301320
larva 1.0055.911 gene 0 gene
15 genes 1 species 0 species
UBERON:0002548101510
bone element 1.0041.618 genes 0 gene
8 genes 7 species 0 species
UBERON:000147480870
cerebellum 1.0092.1412 genes 0 gene
4 genes 11 species 0 species
UBERON:00020371204110
fundus of stomach 1.0092.172 genes 0 gene
14 genes 1 species 0 species
UBERON:0001160201410
pineal body 1.0046.791 gene 0 gene
15 genes 1 species 0 species
UBERON:0001905101510
dermis 1.0051.071 gene 0 gene
15 genes 1 species 0 species
UBERON:0002067101510
cardiac ventricle 0.6055.564 genes 1 gene 11 genes 3 species 1 species UBERON:0002082411131
outflow tract 1.0056.102 genes 0 gene
14 genes 2 species 0 species
UBERON:0004145201420
saccule of membranous labyrinth 1.0049.371 gene 0 gene
15 genes 1 species 0 species
UBERON:0001854101510
camera-type eye 1.0044.575 genes 0 gene
11 genes 5 species 0 species
UBERON:0000019501150
caudal tuberculum, substantia nigra 0.3390.752 genes 1 gene 13 genes 1 species 1 species UBERON:2000633, UBERON:0002038211311
choroid plexus 1.0082.331 gene 0 gene
15 genes 1 species 0 species
UBERON:0001886101510
thymus 1.0091.484 genes 0 gene
12 genes 4 species 0 species
UBERON:0002370401240
motor neuron -1.0042.030 gene
1 gene 15 genes 0 species
1 species CL:0000100011501
epithelium of lens 1.0057.511 gene 0 gene
15 genes 1 species 0 species
UBERON:0001803101510
right cardiac atrium 1.0081.683 genes 0 gene
13 genes 2 species 0 species
UBERON:0002078301320
internal carotid artery -1.0040.890 gene
1 gene 15 genes 0 species
1 species UBERON:0001532011501
1st arch mandibular component 1.0056.771 gene 0 gene
15 genes 1 species 0 species
UBERON:0007237101510
Ammon's horn 1.0089.764 genes 0 gene
12 genes 3 species 0 species
UBERON:0001954401230
epiblast (generic) 1.0066.321 gene 0 gene
15 genes 1 species 0 species
UBERON:0002532101510
adrenal cortex 1.0085.173 genes 0 gene
13 genes 2 species 0 species
UBERON:0001235301320
sternocleidomastoid 1.0052.761 gene 0 gene
15 genes 1 species 0 species
UBERON:0001128101510
brainstem 1.0051.773 genes 0 gene
13 genes 3 species 0 species
UBERON:0002298301330
aorta 1.0084.024 genes 0 gene
12 genes 3 species 0 species
UBERON:0000947401230
right kidney 1.0072.271 gene 0 gene
15 genes 1 species 0 species
UBERON:0004539101510
retina 1.0090.074 genes 0 gene
12 genes 4 species 0 species
UBERON:0000966401240
somite 0.0063.261 gene 1 gene 14 genes 1 species 1 species UBERON:0002329111411
intestine 1.0079.248 genes 0 gene
8 genes 7 species 0 species
UBERON:000016080870
esophagus 1.0085.865 genes 0 gene
11 genes 4 species 0 species
UBERON:0001043501140
blastula 1.0084.224 genes 0 gene
12 genes 4 species 0 species
UBERON:0000307401240
right testis 1.0082.872 genes 0 gene
14 genes 1 species 0 species
UBERON:0004534201410
blood 1.0095.438 genes 0 gene
8 genes 7 species 0 species
UBERON:000017880870
adipose tissue 1.0086.045 genes 0 gene
11 genes 4 species 0 species
UBERON:0001013501140
embryonic head 1.0036.622 genes 0 gene
14 genes 2 species 0 species
UBERON:0008816201420
skeletal muscle tissue 1.0089.0010 genes 0 gene
6 genes 9 species 0 species
UBERON:0001134100690
spleen 1.0095.449 genes 0 gene
7 genes 8 species 0 species
UBERON:000210690780
kidney 1.0095.7916 genes 0 gene
0 gene
15 species 0 species
UBERON:00021131600150
intestinal epithelium 1.0041.671 gene 0 gene
15 genes 1 species 0 species
UBERON:0001277101510
lung, swim bladder 1.0091.4510 genes 0 gene
6 genes 9 species 0 species
UBERON:0002048, UBERON:0006860100690
cardiac atrium 0.6079.974 genes 1 gene 11 genes 3 species 1 species UBERON:0002081411131
ventral horn of spinal cord 1.0046.081 gene 0 gene
15 genes 1 species 0 species
UBERON:0002257101510
islet of Langerhans 1.0079.253 genes 0 gene
13 genes 2 species 0 species
UBERON:0000006301320
neural tube 1.0078.932 genes 0 gene
14 genes 2 species 0 species
UBERON:0001049201420
endocardial cushion -1.0039.650 gene
1 gene 15 genes 0 species
1 species UBERON:0002062011501
cerebral hemisphere 1.0038.9311 genes 0 gene
5 genes 10 species 0 species
UBERON:00018691105100
pigmented layer of retina -1.0043.700 gene
1 gene 15 genes 0 species
1 species UBERON:0001782011501
1st arch maxillary component 1.0056.661 gene 0 gene
15 genes 1 species 0 species
UBERON:0007238101510
cerebellar cortex 1.0087.514 genes 0 gene
12 genes 3 species 0 species
UBERON:0002129401230
heart 1.0082.3214 genes 0 gene
2 genes 13 species 0 species
UBERON:00009481402130
liver 1.0092.2416 genes 0 gene
0 gene
15 species 0 species
UBERON:00021071600150
colon 1.0086.347 genes 0 gene
9 genes 6 species 0 species
UBERON:000115570960
left testis 1.0083.142 genes 0 gene
14 genes 1 species 0 species
UBERON:0004533201410
muscle organ 1.0071.3712 genes 0 gene
4 genes 11 species 0 species
UBERON:00016301204110
striatum 1.0047.503 genes 0 gene
13 genes 2 species 0 species
UBERON:0002435301320
myocardium of ventricle 0.0048.361 gene 1 gene 14 genes 1 species 1 species UBERON:0001083111411
neurohypophysis 1.0081.511 gene 0 gene
15 genes 1 species 0 species
UBERON:0002198101510
presomitic mesoderm 1.0059.362 genes 0 gene
14 genes 2 species 0 species
UBERON:0003059201420
olfactory epithelium 1.0049.481 gene 0 gene
15 genes 1 species 0 species
UBERON:0001997101510
dorsal root ganglion 1.0050.441 gene 0 gene
15 genes 1 species 0 species
UBERON:0000044101510
aortic valve 1.0080.061 gene 0 gene
15 genes 1 species 0 species
UBERON:0002137101510
ciliary body -1.0037.490 gene
1 gene 15 genes 0 species
1 species UBERON:0001775011501
ear vesicle 1.0059.001 gene 0 gene
15 genes 1 species 0 species
UBERON:0003051101510
gall bladder 1.0084.743 genes 0 gene
13 genes 2 species 0 species
UBERON:0002110301320
atrioventricular valve 0.0039.641 gene 1 gene 14 genes 1 species 1 species UBERON:0002133111411
parathyroid gland, pharyngeal gill 1.0071.451 gene 0 gene
15 genes 1 species 0 species
UBERON:0001132, UBERON:0000206101510
zygote 1.0058.091 gene 0 gene
15 genes 1 species 0 species
CL:0000365101510
caudate nucleus 1.0086.962 genes 0 gene
14 genes 1 species 0 species
UBERON:0001873201410
embryo 1.0077.598 genes 0 gene
8 genes 8 species 0 species
UBERON:000092280880
left ovary 1.0086.742 genes 0 gene
14 genes 1 species 0 species
UBERON:0002119201410

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