We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 17 genes 0 species
1 species UBERON:0002206011701
optic fissure -1.0040.620 gene
1 gene 17 genes 0 species
1 species UBERON:0005412011701
epithelial cell of pancreas -1.0050.540 gene
1 gene 17 genes 0 species
1 species CL:0000083011701
semi-lunar valve -1.0037.770 gene
1 gene 17 genes 0 species
1 species UBERON:0005623011701
inferior olivary complex -1.0046.120 gene
1 gene 17 genes 0 species
1 species UBERON:0002127011701
brain blood vessel -1.0039.180 gene
1 gene 17 genes 0 species
1 species UBERON:0003499011701
hypothalamus 0.0054.383 genes 3 genes 12 genes 3 species 3 species UBERON:0001898331233
gingival epithelium -1.0042.370 gene
1 gene 17 genes 0 species
1 species UBERON:0001949011701
gastrula -0.3342.611 gene 2 genes 15 genes 1 species 2 species UBERON:0004734121512
otic placode -1.0047.580 gene
1 gene 17 genes 0 species
1 species UBERON:0003069011701
cleaving embryo -1.0048.770 gene
1 gene 17 genes 0 species
1 species UBERON:0007010011701
midbrain 1.0041.442 genes 0 gene
16 genes 2 species 0 species
UBERON:0001891201620
retinal neural layer -1.0027.960 gene
1 gene 17 genes 0 species
1 species UBERON:0003902011701
cornea 1.0041.191 gene 0 gene
17 genes 1 species 0 species
UBERON:0000964101710
hindbrain 1.0015.9413 genes 0 gene
5 genes 13 species 0 species
UBERON:00020281305130
cranial nerve II -1.0049.020 gene
2 genes 16 genes 0 species
2 species UBERON:0000941021602
stomach -0.2027.562 genes 3 genes 13 genes 2 species 3 species UBERON:0000945231323
pituitary gland -0.1442.503 genes 4 genes 11 genes 3 species 4 species UBERON:0000007341134
inferior vagus X ganglion -1.0041.560 gene
1 gene 17 genes 0 species
1 species UBERON:0005363011701
female reproductive system 1.0041.514 genes 0 gene
14 genes 4 species 0 species
UBERON:0000474401440
epithelium of esophagus -1.0050.040 gene
1 gene 17 genes 0 species
1 species UBERON:0001976011701
kidney epithelium -1.0048.460 gene
1 gene 17 genes 0 species
1 species UBERON:0004819011701
pancreas 0.0046.112 genes 2 genes 14 genes 2 species 2 species UBERON:0001264221422
upper leg skin -1.0032.570 gene
1 gene 17 genes 0 species
1 species UBERON:0004262011701
extra-ocular muscle 1.0057.041 gene 0 gene
17 genes 1 species 0 species
UBERON:0001601101710
limb, paired fin 1.0015.833 genes 0 gene
15 genes 3 species 0 species
UBERON:0002101, UBERON:0002534301530
manus, pectoral fin radial bone -1.0045.890 gene
1 gene 17 genes 0 species
1 species UBERON:0002398, UBERON:2001586011701
putamen 1.0057.061 gene 0 gene
17 genes 1 species 0 species
UBERON:0001874101710
telencephalon 1.0080.2214 genes 0 gene
4 genes 14 species 0 species
UBERON:00018931404140
utricle of membranous labyrinth -1.0038.440 gene
1 gene 17 genes 0 species
1 species UBERON:0001853011701
eyeball of camera-type eye 0.3338.602 genes 1 gene 15 genes 2 species 1 species UBERON:0010230211521
right ovary -1.0030.310 gene
1 gene 17 genes 0 species
1 species UBERON:0002118011701
testis -0.3353.076 genes 12 genes 0 gene
6 species 12 species UBERON:00004736120612
male reproductive system 1.0049.256 genes 0 gene
12 genes 6 species 0 species
UBERON:0000079601260
autopod skin -1.007.220 gene
1 gene 17 genes 0 species
1 species UBERON:0015790011701
multi-cellular organism 1.0090.7818 genes 0 gene
0 gene
18 species 0 species
UBERON:00004681800180
ventricular zone -1.0027.720 gene
2 genes 16 genes 0 species
2 species UBERON:0003053021602
skin epidermis -1.0040.320 gene
1 gene 17 genes 0 species
1 species UBERON:0001003011701
embryonic post-anal tail -1.0024.770 gene
2 genes 16 genes 0 species
2 species UBERON:0007144021602
central nervous system 1.0051.0518 genes 0 gene
0 gene
18 species 0 species
UBERON:00010171800180
fibroblast -1.0017.800 gene
3 genes 15 genes 0 species
3 species CL:0000057031503
mesonephros -1.004.840 gene
1 gene 17 genes 0 species
1 species UBERON:0000080011701
iris 1.0047.301 gene 0 gene
17 genes 1 species 0 species
UBERON:0001769101710
head 0.6046.534 genes 1 gene 13 genes 4 species 1 species UBERON:0000033411341
choroid plexus epithelium 0.0079.361 gene 1 gene 16 genes 1 species 1 species UBERON:0003911111611
tongue muscle -1.0012.560 gene
1 gene 17 genes 0 species
1 species UBERON:0000378011701
trigeminal ganglion 0.0042.931 gene 1 gene 16 genes 1 species 1 species UBERON:0001675111611
forebrain 1.0042.6214 genes 0 gene
4 genes 14 species 0 species
UBERON:00018901404140
vertebral column -1.0046.040 gene
1 gene 17 genes 0 species
1 species UBERON:0001130011701
caecum -1.0041.140 gene
3 genes 15 genes 0 species
3 species UBERON:0001153031503
olfactory bulb -0.3350.001 gene 2 genes 15 genes 1 species 2 species UBERON:0002264121512
diencephalon 1.0074.974 genes 0 gene
14 genes 4 species 0 species
UBERON:0001894401440
heart left ventricle, primary heart field -0.6046.341 gene 4 genes 13 genes 1 species 4 species UBERON:0002084, UBERON:0004140141314
lens of camera-type eye 1.0031.031 gene 0 gene
17 genes 1 species 0 species
UBERON:0000965101710
ear 1.0045.401 gene 0 gene
17 genes 1 species 0 species
UBERON:0001690101710
brain 1.0071.5618 genes 0 gene
0 gene
18 species 0 species
UBERON:00009551800180
collection of basal ganglia 1.0066.652 genes 0 gene
16 genes 2 species 0 species
UBERON:0010011201620
male germ cell -1.0049.300 gene
1 gene 17 genes 0 species
1 species CL:0000015011701
smooth muscle tissue -1.0024.250 gene
3 genes 15 genes 0 species
3 species UBERON:0001135031503
upper arm skin -1.0049.030 gene
1 gene 17 genes 0 species
1 species UBERON:0004263011701
heart right ventricle -1.0052.480 gene
3 genes 15 genes 0 species
3 species UBERON:0002080031503
lip -1.0012.270 gene
1 gene 17 genes 0 species
1 species UBERON:0001833011701
skin of hip -1.0039.550 gene
1 gene 17 genes 0 species
1 species UBERON:0001554011701
female gonad -0.6739.782 genes 10 genes 6 genes 2 species 10 species UBERON:00009922106210
ileum -0.6036.661 gene 4 genes 13 genes 1 species 4 species UBERON:0002116141314
mitral valve -1.0011.490 gene
1 gene 17 genes 0 species
1 species UBERON:0002135011701
cartilage tissue -1.0043.960 gene
2 genes 16 genes 0 species
2 species UBERON:0002418021602
blastopore, primitive streak -1.0040.630 gene
1 gene 17 genes 0 species
1 species UBERON:0000100, UBERON:0004341011701
thyroid gland -0.5033.491 gene 3 genes 14 genes 1 species 3 species UBERON:0002046131413
adenohypophysis -1.0044.820 gene
2 genes 16 genes 0 species
2 species UBERON:0002196021602
choroid plexus of fourth ventricle 1.0066.731 gene 0 gene
17 genes 1 species 0 species
UBERON:0002290101710
larva 1.0025.431 gene 0 gene
17 genes 1 species 0 species
UBERON:0002548101710
bone element 1.0041.612 genes 0 gene
16 genes 2 species 0 species
UBERON:0001474201620
cerebellum 1.0098.8613 genes 0 gene
5 genes 13 species 0 species
UBERON:00020371305130
fundus of stomach -1.0025.950 gene
1 gene 17 genes 0 species
1 species UBERON:0001160011701
pineal body -1.0040.470 gene
1 gene 17 genes 0 species
1 species UBERON:0001905011701
dermis -1.0038.570 gene
1 gene 17 genes 0 species
1 species UBERON:0002067011701
cardiac ventricle 0.0047.741 gene 1 gene 16 genes 1 species 1 species UBERON:0002082111611
outflow tract -1.0044.360 gene
1 gene 17 genes 0 species
1 species UBERON:0004145011701
saccule of membranous labyrinth -1.0047.220 gene
1 gene 17 genes 0 species
1 species UBERON:0001854011701
camera-type eye 1.0040.122 genes 0 gene
16 genes 2 species 0 species
UBERON:0000019201620
caudal tuberculum, substantia nigra 0.0055.361 gene 1 gene 16 genes 1 species 1 species UBERON:2000633, UBERON:0002038111611
choroid plexus 0.0062.751 gene 1 gene 16 genes 1 species 1 species UBERON:0001886111611
thymus -0.6051.411 gene 4 genes 13 genes 1 species 4 species UBERON:0002370141314
tendon -1.0041.880 gene
1 gene 17 genes 0 species
1 species UBERON:0000043011701
motor neuron -1.0042.030 gene
1 gene 17 genes 0 species
1 species CL:0000100011701
epithelium of lens -1.0039.680 gene
1 gene 17 genes 0 species
1 species UBERON:0001803011701
right cardiac atrium 0.008.441 gene 1 gene 16 genes 1 species 1 species UBERON:0002078111611
internal carotid artery -1.0040.890 gene
1 gene 17 genes 0 species
1 species UBERON:0001532011701
1st arch mandibular component -1.0041.150 gene
1 gene 17 genes 0 species
1 species UBERON:0007237011701
endocardial endothelium -1.0012.040 gene
1 gene 17 genes 0 species
1 species UBERON:0005316011701
Ammon's horn 0.0051.512 genes 2 genes 14 genes 2 species 2 species UBERON:0001954221422
epiblast (generic) -1.0028.650 gene
1 gene 17 genes 0 species
1 species UBERON:0002532011701
adrenal cortex 0.0041.811 gene 1 gene 16 genes 1 species 1 species UBERON:0001235111611
sternocleidomastoid -1.0046.730 gene
1 gene 17 genes 0 species
1 species UBERON:0001128011701
brainstem 0.5066.253 genes 1 gene 14 genes 3 species 1 species UBERON:0002298311431
aorta -0.5041.771 gene 3 genes 14 genes 1 species 3 species UBERON:0000947131413
right kidney -1.0015.290 gene
1 gene 17 genes 0 species
1 species UBERON:0004539011701
retina 0.0094.792 genes 2 genes 14 genes 2 species 2 species UBERON:0000966221422
somite -1.0041.230 gene
1 gene 17 genes 0 species
1 species UBERON:0002329011701
intestine 0.5029.843 genes 1 gene 14 genes 3 species 1 species UBERON:0000160311431
esophagus -0.5036.721 gene 3 genes 14 genes 1 species 3 species UBERON:0001043131413
myocardium -1.0043.250 gene
1 gene 17 genes 0 species
1 species UBERON:0002349011701
blastula -1.0034.490 gene
2 genes 16 genes 0 species
2 species UBERON:0000307021602
right testis 1.0053.601 gene 0 gene
17 genes 1 species 0 species
UBERON:0004534101710
blood -0.7143.201 gene 6 genes 11 genes 1 species 6 species UBERON:0000178161116
adipose tissue 0.0041.333 genes 3 genes 12 genes 3 species 3 species UBERON:0001013331233
embryonic head -1.008.840 gene
1 gene 17 genes 0 species
1 species UBERON:0008816011701
skeletal muscle tissue -0.8344.831 gene 11 genes 6 genes 1 species 11 species UBERON:00011341116111
spleen -0.4533.923 genes 8 genes 7 genes 3 species 8 species UBERON:000210638738
kidney 0.0039.746 genes 6 genes 6 genes 6 species 6 species UBERON:000211366666
intestinal epithelium -1.0041.670 gene
1 gene 17 genes 0 species
1 species UBERON:0001277011701
pericardium 0.0041.831 gene 1 gene 16 genes 1 species 1 species UBERON:0002407111611
lung, swim bladder -0.6741.662 genes 10 genes 6 genes 2 species 10 species UBERON:0002048, UBERON:00068602106210
cardiac atrium -0.3341.811 gene 2 genes 15 genes 1 species 2 species UBERON:0002081121512
ventral horn of spinal cord -1.0038.710 gene
1 gene 17 genes 0 species
1 species UBERON:0002257011701
islet of Langerhans 0.0035.141 gene 1 gene 16 genes 1 species 1 species UBERON:0000006111611
neural tube -1.0016.810 gene
1 gene 17 genes 0 species
1 species UBERON:0001049011701
pleura -1.0042.700 gene
1 gene 17 genes 0 species
1 species UBERON:0000977011701
endocardial cushion -1.0039.650 gene
1 gene 17 genes 0 species
1 species UBERON:0002062011701
cerebral hemisphere 1.0062.7514 genes 0 gene
4 genes 14 species 0 species
UBERON:00018691404140
pigmented layer of retina -1.0042.640 gene
2 genes 16 genes 0 species
2 species UBERON:0001782021602
1st arch maxillary component -1.0041.060 gene
1 gene 17 genes 0 species
1 species UBERON:0007238011701
cerebellar cortex 1.0099.414 genes 0 gene
14 genes 4 species 0 species
UBERON:0002129401440
heart -0.1334.337 genes 9 genes 2 genes 7 species 9 species UBERON:000094879279
liver -0.3340.616 genes 12 genes 0 gene
6 species 12 species UBERON:00021076120612
ileal epithelium -1.0054.550 gene
1 gene 17 genes 0 species
1 species UBERON:0008345011701
colon -0.7833.241 gene 8 genes 9 genes 1 species 8 species UBERON:000115518918
left testis 1.0052.191 gene 0 gene
17 genes 1 species 0 species
UBERON:0004533101710
muscle organ 1.0064.865 genes 0 gene
13 genes 5 species 0 species
UBERON:0001630501350
striatum 1.0043.112 genes 0 gene
16 genes 2 species 0 species
UBERON:0002435201620
myocardium of ventricle -1.0039.700 gene
1 gene 17 genes 0 species
1 species UBERON:0001083011701
neurohypophysis -1.0026.560 gene
1 gene 17 genes 0 species
1 species UBERON:0002198011701
presomitic mesoderm -1.0044.380 gene
1 gene 17 genes 0 species
1 species UBERON:0003059011701
olfactory epithelium -1.0043.850 gene
1 gene 17 genes 0 species
1 species UBERON:0001997011701
meninx 1.0073.671 gene 0 gene
17 genes 1 species 0 species
UBERON:0002360101710
dorsal root ganglion -1.0044.320 gene
2 genes 16 genes 0 species
2 species UBERON:0000044021602
aortic valve -1.0042.310 gene
1 gene 17 genes 0 species
1 species UBERON:0002137011701
ciliary body -1.0037.490 gene
1 gene 17 genes 0 species
1 species UBERON:0001775011701
ear vesicle -1.0045.560 gene
1 gene 17 genes 0 species
1 species UBERON:0003051011701
gall bladder -1.0021.990 gene
2 genes 16 genes 0 species
2 species UBERON:0002110021602
atrioventricular valve -1.0039.640 gene
1 gene 17 genes 0 species
1 species UBERON:0002133011701
parathyroid gland, pharyngeal gill -1.0022.100 gene
1 gene 17 genes 0 species
1 species UBERON:0001132, UBERON:0000206011701
gingiva -1.0039.270 gene
1 gene 17 genes 0 species
1 species UBERON:0001828011701
peritoneum 1.0041.411 gene 0 gene
17 genes 1 species 0 species
UBERON:0002358101710
zygote -1.0020.880 gene
1 gene 17 genes 0 species
1 species CL:0000365011701
medulla oblongata -0.3358.701 gene 2 genes 15 genes 1 species 2 species UBERON:0001896121512
pylorus -1.0041.490 gene
1 gene 17 genes 0 species
1 species UBERON:0001166011701
caudate nucleus 1.0057.241 gene 0 gene
17 genes 1 species 0 species
UBERON:0001873101710
embryo -0.2547.623 genes 5 genes 10 genes 3 species 5 species UBERON:0000922351035
left ovary -1.0033.820 gene
1 gene 17 genes 0 species
1 species UBERON:0002119011701

Do not show this banner again