We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
thymus 1.0059.863 genes 0 gene
13 genes 3 species 0 species
UBERON:0002370301330
hypothalamus 0.2078.793 genes 2 genes 11 genes 3 species 2 species UBERON:0001898321132
endocardial endothelium 1.0059.421 gene 0 gene
15 genes 1 species 0 species
UBERON:0005316101510
Ammon's horn 1.0074.205 genes 0 gene
11 genes 5 species 0 species
UBERON:0001954501150
gastrula 1.0079.012 genes 0 gene
14 genes 2 species 0 species
UBERON:0004734201420
epiblast (generic) -1.0025.710 gene
1 gene 15 genes 0 species
1 species UBERON:0002532011501
brainstem 0.3339.922 genes 1 gene 13 genes 2 species 1 species UBERON:0002298211321
midbrain 1.0036.852 genes 0 gene
14 genes 2 species 0 species
UBERON:0001891201420
retinal neural layer -1.0013.600 gene
1 gene 15 genes 0 species
1 species UBERON:0003902011501
aorta 1.0080.133 genes 0 gene
13 genes 3 species 0 species
UBERON:0000947301330
right kidney 1.0026.871 gene 0 gene
15 genes 1 species 0 species
UBERON:0004539101510
retina 0.0085.881 gene 1 gene 14 genes 1 species 1 species UBERON:0000966111411
intestine 1.0066.278 genes 0 gene
8 genes 8 species 0 species
UBERON:000016080880
esophagus 1.0074.394 genes 0 gene
12 genes 4 species 0 species
UBERON:0001043401240
blastula 1.0037.473 genes 0 gene
13 genes 3 species 0 species
UBERON:0000307301330
hindbrain 1.0030.9311 genes 0 gene
5 genes 11 species 0 species
UBERON:00020281105110
right testis 1.0060.441 gene 0 gene
15 genes 1 species 0 species
UBERON:0004534101510
blood 1.0072.725 genes 0 gene
11 genes 5 species 0 species
UBERON:0000178501150
adipose tissue 1.0062.524 genes 0 gene
12 genes 4 species 0 species
UBERON:0001013401240
stomach 1.0075.775 genes 0 gene
11 genes 5 species 0 species
UBERON:0000945501150
embryonic head 1.0061.211 gene 0 gene
15 genes 1 species 0 species
UBERON:0008816101510
pituitary gland 0.6094.554 genes 1 gene 11 genes 4 species 1 species UBERON:0000007411141
skeletal muscle tissue 0.4064.097 genes 3 genes 6 genes 7 species 3 species UBERON:000113473673
pancreas 1.0073.663 genes 0 gene
13 genes 3 species 0 species
UBERON:0001264301330
spleen 0.7876.778 genes 1 gene 7 genes 8 species 1 species UBERON:000210681781
kidney 0.8871.3015 genes 1 gene 0 gene
15 species 1 species UBERON:00021131510151
limb, paired fin 1.0056.729 genes 0 gene
7 genes 9 species 0 species
UBERON:0002101, UBERON:000253490790
lung, swim bladder 0.8069.399 genes 1 gene 6 genes 9 species 1 species UBERON:0002048, UBERON:000686091691
cardiac atrium 0.0017.981 gene 1 gene 14 genes 1 species 1 species UBERON:0002081111411
islet of Langerhans 1.0058.872 genes 0 gene
14 genes 2 species 0 species
UBERON:0000006201420
putamen 1.0067.041 gene 0 gene
15 genes 1 species 0 species
UBERON:0001874101510
neural tube 1.0037.352 genes 0 gene
14 genes 2 species 0 species
UBERON:0001049201420
eyeball of camera-type eye 1.0032.243 genes 0 gene
13 genes 3 species 0 species
UBERON:0010230301330
right ovary 1.0077.051 gene 0 gene
15 genes 1 species 0 species
UBERON:0002118101510
testis 0.5067.5212 genes 4 genes 0 gene
12 species 4 species UBERON:00004731240124
autopod skin 1.0048.751 gene 0 gene
15 genes 1 species 0 species
UBERON:0015790101510
multi-cellular organism 1.0078.9216 genes 0 gene
0 gene
16 species 0 species
UBERON:00004681600160
ventricular zone 1.0068.312 genes 0 gene
14 genes 2 species 0 species
UBERON:0003053201420
embryonic post-anal tail 0.0038.201 gene 1 gene 14 genes 1 species 1 species UBERON:0007144111411
central nervous system 1.0063.6216 genes 0 gene
0 gene
16 species 0 species
UBERON:00010171600160
fibroblast -0.3351.381 gene 2 genes 13 genes 1 species 2 species CL:0000057121312
cerebellar cortex 0.5068.623 genes 1 gene 12 genes 3 species 1 species UBERON:0002129311231
mesonephros 1.0019.252 genes 0 gene
14 genes 2 species 0 species
UBERON:0000080201420
head 1.0074.666 genes 0 gene
10 genes 6 species 0 species
UBERON:0000033601060
heart 1.0068.7514 genes 0 gene
2 genes 14 species 0 species
UBERON:00009481402140
liver 0.7565.4214 genes 2 genes 0 gene
14 species 2 species UBERON:00021071420142
tongue muscle 1.0069.461 gene 0 gene
15 genes 1 species 0 species
UBERON:0000378101510
forebrain 1.0033.0013 genes 0 gene
3 genes 13 species 0 species
UBERON:00018901303130
colon 0.7173.986 genes 1 gene 9 genes 6 species 1 species UBERON:000115561961
vertebral column -1.0046.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001130011501
caecum 0.3367.442 genes 1 gene 13 genes 2 species 1 species UBERON:0001153211321
heart left ventricle, primary heart field 0.3370.272 genes 1 gene 13 genes 2 species 1 species UBERON:0002084, UBERON:0004140211321
olfactory bulb -1.0019.120 gene
1 gene 15 genes 0 species
1 species UBERON:0002264011501
left testis 1.0060.451 gene 0 gene
15 genes 1 species 0 species
UBERON:0004533101510
lens of camera-type eye 1.0024.771 gene 0 gene
15 genes 1 species 0 species
UBERON:0000965101510
brain 1.0082.3416 genes 0 gene
0 gene
16 species 0 species
UBERON:00009551600160
muscle organ 1.0087.9111 genes 0 gene
5 genes 11 species 0 species
UBERON:00016301105110
striatum 0.0013.861 gene 1 gene 14 genes 1 species 1 species UBERON:0002435111411
smooth muscle tissue 1.0076.252 genes 0 gene
14 genes 2 species 0 species
UBERON:0001135201420
neurohypophysis 1.0081.811 gene 0 gene
15 genes 1 species 0 species
UBERON:0002198101510
lip -1.0012.270 gene
1 gene 15 genes 0 species
1 species UBERON:0001833011501
female gonad 0.4095.887 genes 3 genes 6 genes 7 species 3 species UBERON:000099273673
ileum 0.6082.134 genes 1 gene 11 genes 4 species 1 species UBERON:0002116411141
gall bladder 1.0067.032 genes 0 gene
14 genes 2 species 0 species
UBERON:0002110201420
parathyroid gland, pharyngeal gill 1.0090.991 gene 0 gene
15 genes 1 species 0 species
UBERON:0001132, UBERON:0000206101510
thyroid gland 1.0066.523 genes 0 gene
13 genes 3 species 0 species
UBERON:0002046301330
adenohypophysis 1.0093.902 genes 0 gene
14 genes 2 species 0 species
UBERON:0002196201420
zygote -1.0024.350 gene
1 gene 15 genes 0 species
1 species CL:0000365011501
larva 1.0089.571 gene 0 gene
15 genes 1 species 0 species
UBERON:0002548101510
bone element 1.0051.227 genes 0 gene
9 genes 7 species 0 species
UBERON:000147470970
cerebellum 1.0076.1811 genes 0 gene
5 genes 11 species 0 species
UBERON:00020371105110
fundus of stomach 1.0077.451 gene 0 gene
15 genes 1 species 0 species
UBERON:0001160101510
medulla oblongata -1.005.600 gene
1 gene 15 genes 0 species
1 species UBERON:0001896011501
caudate nucleus 1.0066.891 gene 0 gene
15 genes 1 species 0 species
UBERON:0001873101510
embryo 0.7886.778 genes 1 gene 7 genes 8 species 1 species UBERON:000092281781
left ovary 1.0075.021 gene 0 gene
15 genes 1 species 0 species
UBERON:0002119101510
caudal tuberculum, substantia nigra 1.0064.661 gene 0 gene
15 genes 1 species 0 species
UBERON:2000633, UBERON:0002038101510
choroid plexus -1.0023.420 gene
1 gene 15 genes 0 species
1 species UBERON:0001886011501

Do not show this banner again