We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0099.461 gene 0 gene
19 genes 1 species 0 species
UBERON:0002206101910
chordate pharynx 1.0057.882 genes 0 gene
18 genes 2 species 0 species
UBERON:0001042201820
optic fissure 1.0078.291 gene 0 gene
19 genes 1 species 0 species
UBERON:0005412101910
postcranial axial skeleton 1.0057.461 gene 0 gene
19 genes 1 species 0 species
UBERON:0002090101910
epithelial cell of pancreas 1.0072.631 gene 0 gene
19 genes 1 species 0 species
CL:0000083101910
semi-lunar valve 1.0070.101 gene 0 gene
19 genes 1 species 0 species
UBERON:0005623101910
inferior olivary complex 1.0064.201 gene 0 gene
19 genes 1 species 0 species
UBERON:0002127101910
brain blood vessel 1.0073.431 gene 0 gene
19 genes 1 species 0 species
UBERON:0003499101910
hindlimb, pelvic fin 1.0059.976 genes 0 gene
14 genes 6 species 0 species
UBERON:0002103, UBERON:0000152601460
hypothalamus 1.0096.775 genes 0 gene
15 genes 5 species 0 species
UBERON:0001898501550
nervous system 1.0061.0920 genes 0 gene
0 gene
20 species 0 species
UBERON:00010162000200
gingival epithelium -1.0042.370 gene
1 gene 19 genes 0 species
1 species UBERON:0001949011901
gastrula 0.3353.812 genes 1 gene 17 genes 2 species 1 species UBERON:0004734211721
otic placode 1.0060.561 gene 0 gene
19 genes 1 species 0 species
UBERON:0003069101910
cleaving embryo 1.0054.571 gene 0 gene
19 genes 1 species 0 species
UBERON:0007010101910
midbrain 1.0089.152 genes 0 gene
18 genes 2 species 0 species
UBERON:0001891201820
retinal neural layer 1.0091.261 gene 0 gene
19 genes 1 species 0 species
UBERON:0003902101910
cornea 1.0082.611 gene 0 gene
19 genes 1 species 0 species
UBERON:0000964101910
hindbrain 1.0086.1715 genes 0 gene
5 genes 15 species 0 species
UBERON:00020281505150
cranial nerve II 0.0079.921 gene 1 gene 18 genes 1 species 1 species UBERON:0000941111811
stomach 1.0069.525 genes 0 gene
15 genes 5 species 0 species
UBERON:0000945501550
pituitary gland 1.0082.636 genes 0 gene
14 genes 6 species 0 species
UBERON:0000007601460
inferior vagus X ganglion 1.0079.321 gene 0 gene
19 genes 1 species 0 species
UBERON:0005363101910
female reproductive system 1.0075.4114 genes 0 gene
6 genes 14 species 0 species
UBERON:00004741406140
epithelium of esophagus -1.0050.040 gene
1 gene 19 genes 0 species
1 species UBERON:0001976011901
kidney epithelium 1.0051.412 genes 0 gene
18 genes 2 species 0 species
UBERON:0004819201820
pancreas 0.5076.083 genes 1 gene 16 genes 3 species 1 species UBERON:0001264311631
upper leg skin 1.0063.841 gene 0 gene
19 genes 1 species 0 species
UBERON:0004262101910
extra-ocular muscle 1.0069.951 gene 0 gene
19 genes 1 species 0 species
UBERON:0001601101910
limb, paired fin 1.0083.587 genes 0 gene
13 genes 7 species 0 species
UBERON:0002101, UBERON:0002534701370
manus, pectoral fin radial bone 1.0082.631 gene 0 gene
19 genes 1 species 0 species
UBERON:0002398, UBERON:2001586101910
face 1.0071.428 genes 0 gene
12 genes 8 species 0 species
UBERON:0001456801280
blood vessel 1.0058.314 genes 0 gene
16 genes 4 species 0 species
UBERON:0001981401640
putamen 1.0088.491 gene 0 gene
19 genes 1 species 0 species
UBERON:0001874101910
telencephalon 1.0093.9914 genes 0 gene
6 genes 14 species 0 species
UBERON:00018931406140
utricle of membranous labyrinth 1.0096.131 gene 0 gene
19 genes 1 species 0 species
UBERON:0001853101910
eyeball of camera-type eye 1.0087.176 genes 0 gene
14 genes 6 species 0 species
UBERON:0010230601460
right ovary 1.0065.581 gene 0 gene
19 genes 1 species 0 species
UBERON:0002118101910
male reproductive system 1.0063.2015 genes 0 gene
5 genes 15 species 0 species
UBERON:00000791505150
testis 0.4793.0514 genes 5 genes 1 gene 14 species 5 species UBERON:00004731451145
autopod skin 1.0031.181 gene 0 gene
19 genes 1 species 0 species
UBERON:0015790101910
multi-cellular organism 1.0072.0320 genes 0 gene
0 gene
20 species 0 species
UBERON:00004682000200
ventricular zone 1.0082.292 genes 0 gene
18 genes 2 species 0 species
UBERON:0003053201820
skin epidermis 1.0067.572 genes 0 gene
18 genes 2 species 0 species
UBERON:0001003201820
embryonic post-anal tail 0.0063.191 gene 1 gene 18 genes 1 species 1 species UBERON:0007144111811
peripheral nervous system 1.0067.292 genes 0 gene
18 genes 2 species 0 species
UBERON:0000010201820
central nervous system 1.0097.9520 genes 0 gene
0 gene
20 species 0 species
UBERON:00010172000200
fibroblast 0.5080.143 genes 1 gene 16 genes 3 species 1 species CL:0000057311631
mesonephros 1.0033.392 genes 0 gene
18 genes 2 species 0 species
UBERON:0000080201820
iris 1.0096.221 gene 0 gene
19 genes 1 species 0 species
UBERON:0001769101910
head 1.0092.929 genes 0 gene
11 genes 9 species 0 species
UBERON:0000033901190
choroid plexus epithelium 1.0091.932 genes 0 gene
18 genes 2 species 0 species
UBERON:0003911201820
tongue muscle -1.0036.950 gene
1 gene 19 genes 0 species
1 species UBERON:0000378011901
trigeminal ganglion 1.0083.012 genes 0 gene
18 genes 2 species 0 species
UBERON:0001675201820
forebrain 1.0086.2214 genes 0 gene
6 genes 14 species 0 species
UBERON:00018901406140
vertebral column -1.0046.040 gene
1 gene 19 genes 0 species
1 species UBERON:0001130011901
caecum 0.0057.541 gene 1 gene 18 genes 1 species 1 species UBERON:0001153111811
diencephalon 1.0074.326 genes 0 gene
14 genes 6 species 0 species
UBERON:0001894601460
olfactory bulb 0.3393.202 genes 1 gene 17 genes 2 species 1 species UBERON:0002264211721
heart left ventricle, primary heart field 1.0085.504 genes 0 gene
16 genes 4 species 0 species
UBERON:0002084, UBERON:0004140401640
lens of camera-type eye 1.0064.601 gene 0 gene
19 genes 1 species 0 species
UBERON:0000965101910
ear 1.0059.672 genes 0 gene
18 genes 2 species 0 species
UBERON:0001690201820
brain 1.0095.5520 genes 0 gene
0 gene
20 species 0 species
UBERON:00009552000200
collection of basal ganglia 1.0063.882 genes 0 gene
18 genes 2 species 0 species
UBERON:0010011201820
male germ cell 0.6049.304 genes 1 gene 15 genes 4 species 1 species CL:0000015411541
upper arm skin 1.0058.081 gene 0 gene
19 genes 1 species 0 species
UBERON:0004263101910
smooth muscle tissue 1.0074.164 genes 0 gene
16 genes 4 species 0 species
UBERON:0001135401640
heart right ventricle 0.3378.822 genes 1 gene 17 genes 2 species 1 species UBERON:0002080211721
lip 1.0060.211 gene 0 gene
19 genes 1 species 0 species
UBERON:0001833101910
gonad 1.0061.5217 genes 0 gene
3 genes 17 species 0 species
UBERON:00009911703170
skin of hip 1.0068.131 gene 0 gene
19 genes 1 species 0 species
UBERON:0001554101910
female gonad 0.6966.4411 genes 2 genes 7 genes 11 species 2 species UBERON:00009921127112
internal ear 1.0053.941 gene 0 gene
19 genes 1 species 0 species
UBERON:0001846101910
ileum 0.5051.743 genes 1 gene 16 genes 3 species 1 species UBERON:0002116311631
mitral valve 1.0091.721 gene 0 gene
19 genes 1 species 0 species
UBERON:0002135101910
cartilage tissue 1.0049.993 genes 0 gene
17 genes 3 species 0 species
UBERON:0002418301730
blastopore, primitive streak 1.0040.631 gene 0 gene
19 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101910
thyroid gland 0.6077.224 genes 1 gene 15 genes 4 species 1 species UBERON:0002046411541
adenohypophysis 1.0081.393 genes 0 gene
17 genes 3 species 0 species
UBERON:0002196301730
midbrain tegmentum 1.0060.852 genes 0 gene
18 genes 2 species 0 species
UBERON:0001943201820
choroid plexus of fourth ventricle 1.0072.351 gene 0 gene
19 genes 1 species 0 species
UBERON:0002290101910
larva 1.0082.931 gene 0 gene
19 genes 1 species 0 species
UBERON:0002548101910
bone element 1.0054.566 genes 0 gene
14 genes 6 species 0 species
UBERON:0001474601460
cerebellum 1.0097.4214 genes 0 gene
6 genes 14 species 0 species
UBERON:00020371406140
fundus of stomach 1.0069.831 gene 0 gene
19 genes 1 species 0 species
UBERON:0001160101910
pineal body 1.0092.272 genes 0 gene
18 genes 2 species 0 species
UBERON:0001905201820
dermis 1.0060.451 gene 0 gene
19 genes 1 species 0 species
UBERON:0002067101910
cardiac ventricle 1.0067.964 genes 0 gene
16 genes 4 species 0 species
UBERON:0002082401640
outflow tract 1.0059.492 genes 0 gene
18 genes 2 species 0 species
UBERON:0004145201820
saccule of membranous labyrinth 1.0063.231 gene 0 gene
19 genes 1 species 0 species
UBERON:0001854101910
camera-type eye 1.0087.396 genes 0 gene
14 genes 6 species 0 species
UBERON:0000019601460
caudal tuberculum, substantia nigra 1.0098.802 genes 0 gene
18 genes 2 species 0 species
UBERON:2000633, UBERON:0002038201820
choroid plexus 1.0058.103 genes 0 gene
17 genes 3 species 0 species
UBERON:0001886301730
thymus 0.2057.833 genes 2 genes 15 genes 3 species 2 species UBERON:0002370321532
forelimb, pectoral fin 1.0070.822 genes 0 gene
18 genes 2 species 0 species
UBERON:0002102, UBERON:0000151201820
tendon 1.0056.061 gene 0 gene
19 genes 1 species 0 species
UBERON:0000043101910
motor neuron 1.0090.361 gene 0 gene
19 genes 1 species 0 species
CL:0000100101910
olfactory cortex 1.0065.612 genes 0 gene
18 genes 2 species 0 species
UBERON:0002894201820
epithelium of lens 1.0066.861 gene 0 gene
19 genes 1 species 0 species
UBERON:0001803101910
right cardiac atrium 1.0087.512 genes 0 gene
18 genes 2 species 0 species
UBERON:0002078201820
internal carotid artery 1.0075.581 gene 0 gene
19 genes 1 species 0 species
UBERON:0001532101910
1st arch mandibular component 1.0071.201 gene 0 gene
19 genes 1 species 0 species
UBERON:0007237101910
calcareous tooth -1.0063.140 gene
1 gene 19 genes 0 species
1 species UBERON:0001091011901
Ammon's horn 1.0097.095 genes 0 gene
15 genes 5 species 0 species
UBERON:0001954501550
epiblast (generic) 1.0055.681 gene 0 gene
19 genes 1 species 0 species
UBERON:0002532101910
adrenal cortex 1.0080.612 genes 0 gene
18 genes 2 species 0 species
UBERON:0001235201820
sternocleidomastoid -1.0039.620 gene
1 gene 19 genes 0 species
1 species UBERON:0001128011901
brainstem 1.0099.004 genes 0 gene
16 genes 4 species 0 species
UBERON:0002298401640
aorta 1.0078.494 genes 0 gene
16 genes 4 species 0 species
UBERON:0000947401640
right kidney 1.0038.381 gene 0 gene
19 genes 1 species 0 species
UBERON:0004539101910
retina 1.0095.915 genes 0 gene
15 genes 5 species 0 species
UBERON:0000966501550
somite 1.0041.231 gene 0 gene
19 genes 1 species 0 species
UBERON:0002329101910
intestine 1.0073.518 genes 0 gene
12 genes 8 species 0 species
UBERON:0000160801280
esophagus 0.5066.923 genes 1 gene 16 genes 3 species 1 species UBERON:0001043311631
myocardium 1.0073.062 genes 0 gene
18 genes 2 species 0 species
UBERON:0002349201820
blastula 0.5028.733 genes 1 gene 16 genes 3 species 1 species UBERON:0000307311631
right testis 1.0053.281 gene 0 gene
19 genes 1 species 0 species
UBERON:0004534101910
blood -0.4347.422 genes 5 genes 13 genes 2 species 5 species UBERON:0000178251325
adipose tissue 1.0094.125 genes 0 gene
15 genes 5 species 0 species
UBERON:0001013501550
kidney blood vessel -1.0063.320 gene
1 gene 19 genes 0 species
1 species UBERON:0003517011901
embryonic head 1.0056.182 genes 0 gene
18 genes 2 species 0 species
UBERON:0008816201820
skeletal muscle tissue 0.6766.2710 genes 2 genes 8 genes 10 species 2 species UBERON:00011341028102
integumental system 1.0055.1410 genes 0 gene
10 genes 10 species 0 species
UBERON:000241610010100
cardiovascular system 1.0055.1415 genes 0 gene
5 genes 15 species 0 species
UBERON:00045351505150
spleen 0.0042.885 genes 5 genes 10 genes 5 species 5 species UBERON:0002106551055
kidney 0.7065.5317 genes 3 genes 0 gene
17 species 3 species UBERON:00021131730173
intestinal epithelium 1.0041.671 gene 0 gene
19 genes 1 species 0 species
UBERON:0001277101910
pericardium 0.0064.171 gene 1 gene 18 genes 1 species 1 species UBERON:0002407111811
lung, swim bladder 0.1764.357 genes 5 genes 8 genes 7 species 5 species UBERON:0002048, UBERON:000686075875
cardiac atrium 0.5074.153 genes 1 gene 16 genes 3 species 1 species UBERON:0002081311631
ventral horn of spinal cord 1.0098.111 gene 0 gene
19 genes 1 species 0 species
UBERON:0002257101910
islet of Langerhans 1.0086.342 genes 0 gene
18 genes 2 species 0 species
UBERON:0000006201820
neural tube 1.0085.032 genes 0 gene
18 genes 2 species 0 species
UBERON:0001049201820
pleura 1.0067.971 gene 0 gene
19 genes 1 species 0 species
UBERON:0000977101910
endocardial cushion 1.0062.631 gene 0 gene
19 genes 1 species 0 species
UBERON:0002062101910
cerebral hemisphere 1.0092.6014 genes 0 gene
6 genes 14 species 0 species
UBERON:00018691406140
appendicular skeleton 1.0077.272 genes 0 gene
18 genes 2 species 0 species
UBERON:0002091201820
pigmented layer of retina 1.0081.022 genes 0 gene
18 genes 2 species 0 species
UBERON:0001782201820
1st arch maxillary component 1.0069.181 gene 0 gene
19 genes 1 species 0 species
UBERON:0007238101910
cerebellar cortex 1.0097.874 genes 0 gene
16 genes 4 species 0 species
UBERON:0002129401640
cranial ganglion 1.0076.912 genes 0 gene
18 genes 2 species 0 species
UBERON:0001714201820
heart 0.7682.1415 genes 2 genes 3 genes 15 species 2 species UBERON:00009481523152
liver 0.6054.3016 genes 4 genes 0 gene
16 species 4 species UBERON:00021071640164
cranium 1.0057.101 gene 0 gene
19 genes 1 species 0 species
UBERON:0003128101910
ileal epithelium 1.0066.301 gene 0 gene
19 genes 1 species 0 species
UBERON:0008345101910
colon 0.7558.987 genes 1 gene 12 genes 7 species 1 species UBERON:0001155711271
left testis 1.0052.611 gene 0 gene
19 genes 1 species 0 species
UBERON:0004533101910
telencephalic ventricle 1.0055.921 gene 0 gene
19 genes 1 species 0 species
UBERON:0002285101910
muscle organ 1.0059.5112 genes 0 gene
8 genes 12 species 0 species
UBERON:00016301208120
striatum 1.0097.032 genes 0 gene
18 genes 2 species 0 species
UBERON:0002435201820
myocardium of ventricle 0.3339.702 genes 1 gene 17 genes 2 species 1 species UBERON:0001083211721
neurohypophysis 1.0050.162 genes 0 gene
18 genes 2 species 0 species
UBERON:0002198201820
presomitic mesoderm 1.0045.641 gene 0 gene
19 genes 1 species 0 species
UBERON:0003059101910
olfactory epithelium 1.0064.831 gene 0 gene
19 genes 1 species 0 species
UBERON:0001997101910
meninx 1.0071.041 gene 0 gene
19 genes 1 species 0 species
UBERON:0002360101910
dorsal root ganglion 1.0078.472 genes 0 gene
18 genes 2 species 0 species
UBERON:0000044201820
aortic valve 1.0042.311 gene 0 gene
19 genes 1 species 0 species
UBERON:0002137101910
ciliary body 1.0086.151 gene 0 gene
19 genes 1 species 0 species
UBERON:0001775101910
ear vesicle 1.0062.481 gene 0 gene
19 genes 1 species 0 species
UBERON:0003051101910
musculature 1.0065.3812 genes 0 gene
8 genes 12 species 0 species
UBERON:00010151208120
gall bladder 0.3376.382 genes 1 gene 17 genes 2 species 1 species UBERON:0002110211721
atrioventricular valve 1.0061.242 genes 0 gene
18 genes 2 species 0 species
UBERON:0002133201820
parathyroid gland, pharyngeal gill -1.0025.320 gene
1 gene 19 genes 0 species
1 species UBERON:0001132, UBERON:0000206011901
renal system 1.0055.4417 genes 0 gene
3 genes 17 species 0 species
UBERON:00010081703170
gingiva -1.0051.850 gene
1 gene 19 genes 0 species
1 species UBERON:0001828011901
peritoneum 1.0063.511 gene 0 gene
19 genes 1 species 0 species
UBERON:0002358101910
zygote 1.0068.581 gene 0 gene
19 genes 1 species 0 species
CL:0000365101910
respiratory system 1.0061.097 genes 0 gene
13 genes 7 species 0 species
UBERON:0001004701370
medulla oblongata 1.0098.032 genes 0 gene
18 genes 2 species 0 species
UBERON:0001896201820
pylorus 1.0059.211 gene 0 gene
19 genes 1 species 0 species
UBERON:0001166101910
caudate nucleus 1.0089.141 gene 0 gene
19 genes 1 species 0 species
UBERON:0001873101910
embryo 1.0066.2610 genes 0 gene
10 genes 10 species 0 species
UBERON:000092210010100
left ovary 1.0066.041 gene 0 gene
19 genes 1 species 0 species
UBERON:0002119101910

Do not show this banner again