We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
epithelial cell of pancreas -1.0064.730 gene
1 gene 15 genes 0 species
1 species CL:0000083011501
hypothalamus -0.3357.822 genes 4 genes 10 genes 2 species 4 species UBERON:0001898241024
paraxial mesoderm -1.0052.430 gene
1 gene 15 genes 0 species
1 species UBERON:0003077011501
gingival epithelium -1.0044.680 gene
1 gene 15 genes 0 species
1 species UBERON:0001949011501
gastrula 1.0041.221 gene 0 gene
15 genes 1 species 0 species
UBERON:0004734101510
cleaving embryo -1.0042.860 gene
1 gene 15 genes 0 species
1 species UBERON:0007010011501
midbrain 1.0053.632 genes 0 gene
14 genes 2 species 0 species
UBERON:0001891201420
retinal neural layer 1.0046.141 gene 0 gene
15 genes 1 species 0 species
UBERON:0003902101510
hindbrain 1.0054.659 genes 0 gene
7 genes 9 species 0 species
UBERON:000202890790
stomach 0.3361.374 genes 2 genes 10 genes 4 species 2 species UBERON:0000945421042
pituitary gland -0.6744.721 gene 5 genes 10 genes 1 species 5 species UBERON:0000007151015
inferior vagus X ganglion -1.0044.940 gene
1 gene 15 genes 0 species
1 species UBERON:0005363011501
female reproductive system 1.0069.9912 genes 0 gene
4 genes 12 species 0 species
UBERON:00004741204120
kidney epithelium 0.0070.041 gene 1 gene 14 genes 1 species 1 species UBERON:0004819111411
pancreas 0.5050.853 genes 1 gene 12 genes 3 species 1 species UBERON:0001264311231
upper leg skin -1.0046.840 gene
1 gene 15 genes 0 species
1 species UBERON:0004262011501
limb, paired fin 1.0064.467 genes 0 gene
9 genes 7 species 0 species
UBERON:0002101, UBERON:000253470970
putamen 1.0065.241 gene 0 gene
15 genes 1 species 0 species
UBERON:0001874101510
right ovary 1.0049.591 gene 0 gene
15 genes 1 species 0 species
UBERON:0002118101510
testis 0.2571.9610 genes 6 genes 0 gene
10 species 6 species UBERON:00004731060106
autopod skin 1.0035.391 gene 0 gene
15 genes 1 species 0 species
UBERON:0015790101510
multi-cellular organism 1.0057.0616 genes 0 gene
0 gene
16 species 0 species
UBERON:00004681600160
ventricular zone 1.0077.972 genes 0 gene
14 genes 2 species 0 species
UBERON:0003053201420
embryonic post-anal tail 0.0080.021 gene 1 gene 14 genes 1 species 1 species UBERON:0007144111411
fibroblast 0.3375.012 genes 1 gene 13 genes 2 species 1 species CL:0000057211321
iris 1.0053.841 gene 0 gene
15 genes 1 species 0 species
UBERON:0001769101510
head 1.0074.997 genes 0 gene
9 genes 7 species 0 species
UBERON:000003370970
tongue muscle 1.0038.211 gene 0 gene
15 genes 1 species 0 species
UBERON:0000378101510
trigeminal ganglion -1.0041.590 gene
1 gene 15 genes 0 species
1 species UBERON:0001675011501
forebrain 1.0053.4711 genes 0 gene
5 genes 11 species 0 species
UBERON:00018901105110
vertebral column -1.0046.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001130011501
caecum -0.3348.971 gene 2 genes 13 genes 1 species 2 species UBERON:0001153121312
heart left ventricle, primary heart field 0.0059.822 genes 2 genes 12 genes 2 species 2 species UBERON:0002084, UBERON:0004140221222
olfactory bulb 1.0051.392 genes 0 gene
14 genes 2 species 0 species
UBERON:0002264201420
lens of camera-type eye 1.0054.271 gene 0 gene
15 genes 1 species 0 species
UBERON:0000965101510
brain 1.0067.7415 genes 0 gene
1 gene 15 species 0 species
UBERON:00009551501150
smooth muscle tissue 1.0060.573 genes 0 gene
13 genes 3 species 0 species
UBERON:0001135301330
upper arm skin -1.0055.580 gene
1 gene 15 genes 0 species
1 species UBERON:0004263011501
heart right ventricle 0.0042.451 gene 1 gene 14 genes 1 species 1 species UBERON:0002080111411
lip 1.0063.251 gene 0 gene
15 genes 1 species 0 species
UBERON:0001833101510
skin of hip -1.0050.430 gene
1 gene 15 genes 0 species
1 species UBERON:0001554011501
female gonad 0.6771.3110 genes 2 genes 4 genes 10 species 2 species UBERON:00009921024102
ileum 0.0075.832 genes 2 genes 12 genes 2 species 2 species UBERON:0002116221222
mitral valve 1.0038.351 gene 0 gene
15 genes 1 species 0 species
UBERON:0002135101510
cartilage tissue 0.0077.951 gene 1 gene 14 genes 1 species 1 species UBERON:0002418111411
thyroid gland -0.5075.151 gene 3 genes 12 genes 1 species 3 species UBERON:0002046131213
adenohypophysis 0.0046.841 gene 1 gene 14 genes 1 species 1 species UBERON:0002196111411
larva 1.0052.451 gene 0 gene
15 genes 1 species 0 species
UBERON:0002548101510
cerebellum 0.3868.289 genes 4 genes 3 genes 9 species 4 species UBERON:000203794394
fundus of stomach 1.0046.371 gene 0 gene
15 genes 1 species 0 species
UBERON:0001160101510
cardiac ventricle 1.0070.323 genes 0 gene
13 genes 3 species 0 species
UBERON:0002082301330
caudal tuberculum, substantia nigra 1.0053.351 gene 0 gene
15 genes 1 species 0 species
UBERON:2000633, UBERON:0002038101510
choroid plexus -1.0023.420 gene
1 gene 15 genes 0 species
1 species UBERON:0001886011501
thymus -0.2051.792 genes 3 genes 11 genes 2 species 3 species UBERON:0002370231123
tendon 1.0058.181 gene 0 gene
15 genes 1 species 0 species
UBERON:0000043101510
right cardiac atrium 1.0029.602 genes 0 gene
14 genes 2 species 0 species
UBERON:0002078201420
endocardial endothelium -1.0012.040 gene
1 gene 15 genes 0 species
1 species UBERON:0005316011501
Ammon's horn 0.5063.983 genes 1 gene 12 genes 3 species 1 species UBERON:0001954311231
epiblast (generic) 1.0076.511 gene 0 gene
15 genes 1 species 0 species
UBERON:0002532101510
adrenal cortex 0.0044.761 gene 1 gene 14 genes 1 species 1 species UBERON:0001235111411
brainstem -1.0012.800 gene
2 genes 14 genes 0 species
2 species UBERON:0002298021402
aorta 1.0046.503 genes 0 gene
13 genes 3 species 0 species
UBERON:0000947301330
right kidney 1.0036.941 gene 0 gene
15 genes 1 species 0 species
UBERON:0004539101510
retina 0.0045.512 genes 2 genes 12 genes 2 species 2 species UBERON:0000966221222
somite -1.0044.750 gene
1 gene 15 genes 0 species
1 species UBERON:0002329011501
intestine 1.0068.046 genes 0 gene
10 genes 6 species 0 species
UBERON:0000160601060
esophagus 0.5063.683 genes 1 gene 12 genes 3 species 1 species UBERON:0001043311231
myocardium -1.0042.450 gene
1 gene 15 genes 0 species
1 species UBERON:0002349011501
blastula 1.0043.683 genes 0 gene
13 genes 3 species 0 species
UBERON:0000307301330
right testis 1.0085.831 gene 0 gene
15 genes 1 species 0 species
UBERON:0004534101510
blood 0.0085.564 genes 4 genes 8 genes 4 species 4 species UBERON:000017844844
adipose tissue 0.6043.314 genes 1 gene 11 genes 4 species 1 species UBERON:0001013411141
skeletal muscle tissue 0.6065.078 genes 2 genes 6 genes 8 species 2 species UBERON:000113482682
spleen 0.5068.786 genes 2 genes 8 genes 6 species 2 species UBERON:000210662862
kidney 0.4577.258 genes 3 genes 5 genes 8 species 3 species UBERON:000211383583
pericardium 0.0041.831 gene 1 gene 14 genes 1 species 1 species UBERON:0002407111411
lung, swim bladder 0.4595.678 genes 3 genes 5 genes 8 species 3 species UBERON:0002048, UBERON:000686083583
cardiac atrium 0.3353.672 genes 1 gene 13 genes 2 species 1 species UBERON:0002081211321
islet of Langerhans 1.0069.222 genes 0 gene
14 genes 2 species 0 species
UBERON:0000006201420
neural tube 1.0052.372 genes 0 gene
14 genes 2 species 0 species
UBERON:0001049201420
pigmented layer of retina -1.0040.590 gene
1 gene 15 genes 0 species
1 species UBERON:0001782011501
cerebellar cortex 1.0085.823 genes 0 gene
13 genes 3 species 0 species
UBERON:0002129301330
heart 0.4780.1011 genes 4 genes 1 gene 11 species 4 species UBERON:00009481141114
liver 0.1354.179 genes 7 genes 0 gene
9 species 7 species UBERON:000210797097
colon 0.1472.144 genes 3 genes 9 genes 4 species 3 species UBERON:000115543943
left testis 1.0085.671 gene 0 gene
15 genes 1 species 0 species
UBERON:0004533101510
muscle organ 1.0070.5512 genes 0 gene
4 genes 12 species 0 species
UBERON:00016301204120
striatum 1.0050.342 genes 0 gene
14 genes 2 species 0 species
UBERON:0002435201420
neurohypophysis -1.0028.660 gene
1 gene 15 genes 0 species
1 species UBERON:0002198011501
presomitic mesoderm -1.0044.080 gene
1 gene 15 genes 0 species
1 species UBERON:0003059011501
dorsal root ganglion -1.0041.660 gene
1 gene 15 genes 0 species
1 species UBERON:0000044011501
gall bladder 1.0060.482 genes 0 gene
14 genes 2 species 0 species
UBERON:0002110201420
parathyroid gland, pharyngeal gill 1.0062.421 gene 0 gene
15 genes 1 species 0 species
UBERON:0001132, UBERON:0000206101510
gingiva -1.0039.270 gene
1 gene 15 genes 0 species
1 species UBERON:0001828011501
peritoneum 1.0041.411 gene 0 gene
15 genes 1 species 0 species
UBERON:0002358101510
zygote 1.0070.431 gene 0 gene
15 genes 1 species 0 species
CL:0000365101510
medulla oblongata -1.0044.730 gene
2 genes 14 genes 0 species
2 species UBERON:0001896021402
pylorus -1.0041.490 gene
1 gene 15 genes 0 species
1 species UBERON:0001166011501
caudate nucleus 1.0063.081 gene 0 gene
15 genes 1 species 0 species
UBERON:0001873101510
embryo 1.0047.997 genes 0 gene
9 genes 7 species 0 species
UBERON:000092270970
left ovary 1.0046.971 gene 0 gene
15 genes 1 species 0 species
UBERON:0002119101510

Do not show this banner again