We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0060.920 gene
1 gene 17 genes 0 species
1 species UBERON:0002206011701
optic fissure 1.0071.651 gene 0 gene
17 genes 1 species 0 species
UBERON:0005412101710
chordate pharynx 1.0057.881 gene 0 gene
17 genes 1 species 0 species
UBERON:0001042101710
postcranial axial skeleton -1.0053.710 gene
1 gene 17 genes 0 species
1 species UBERON:0002090011701
epithelial cell of pancreas -1.0056.060 gene
1 gene 17 genes 0 species
1 species CL:0000083011701
semi-lunar valve 1.0051.591 gene 0 gene
17 genes 1 species 0 species
UBERON:0005623101710
brain blood vessel 1.0058.501 gene 0 gene
17 genes 1 species 0 species
UBERON:0003499101710
hindlimb, pelvic fin 1.0054.973 genes 0 gene
15 genes 3 species 0 species
UBERON:0002103, UBERON:0000152301530
hypothalamus -0.3351.782 genes 4 genes 12 genes 2 species 4 species UBERON:0001898241224
paraxial mesoderm -1.0044.810 gene
1 gene 17 genes 0 species
1 species UBERON:0003077011701
nervous system 1.0061.0913 genes 0 gene
5 genes 13 species 0 species
UBERON:00010161305130
gingival epithelium -1.0067.850 gene
1 gene 17 genes 0 species
1 species UBERON:0001949011701
gastrula -0.3358.661 gene 2 genes 15 genes 1 species 2 species UBERON:0004734121512
otic placode -1.0047.580 gene
1 gene 17 genes 0 species
1 species UBERON:0003069011701
cleaving embryo 0.0060.651 gene 1 gene 16 genes 1 species 1 species UBERON:0007010111611
midbrain 1.0064.003 genes 0 gene
15 genes 3 species 0 species
UBERON:0001891301530
retinal neural layer 1.0020.211 gene 0 gene
17 genes 1 species 0 species
UBERON:0003902101710
cornea 1.0051.311 gene 0 gene
17 genes 1 species 0 species
UBERON:0000964101710
hindbrain 1.0057.693 genes 0 gene
15 genes 3 species 0 species
UBERON:0002028301530
cranial nerve II -1.0055.280 gene
1 gene 17 genes 0 species
1 species UBERON:0000941011701
stomach -0.2033.812 genes 3 genes 13 genes 2 species 3 species UBERON:0000945231323
inner nuclear layer of retina 1.0061.751 gene 0 gene
17 genes 1 species 0 species
UBERON:0001791101710
pituitary gland 0.4353.795 genes 2 genes 11 genes 5 species 2 species UBERON:0000007521152
inferior vagus X ganglion -1.0063.910 gene
1 gene 17 genes 0 species
1 species UBERON:0005363011701
female reproductive system 1.0064.155 genes 0 gene
13 genes 5 species 0 species
UBERON:0000474501350
kidney epithelium 0.0056.091 gene 1 gene 16 genes 1 species 1 species UBERON:0004819111611
pancreas -0.5050.111 gene 3 genes 14 genes 1 species 3 species UBERON:0001264131413
upper leg skin -1.0045.130 gene
1 gene 17 genes 0 species
1 species UBERON:0004262011701
extra-ocular muscle -1.0052.030 gene
1 gene 17 genes 0 species
1 species UBERON:0001601011701
limb, paired fin 1.0030.893 genes 0 gene
15 genes 3 species 0 species
UBERON:0002101, UBERON:0002534301530
manus, pectoral fin radial bone -1.0061.690 gene
1 gene 17 genes 0 species
1 species UBERON:0002398, UBERON:2001586011701
atrioventricular canal 1.0065.371 gene 0 gene
17 genes 1 species 0 species
UBERON:0002087101710
face 1.0060.708 genes 0 gene
10 genes 8 species 0 species
UBERON:0001456801080
blood vessel 1.0058.312 genes 0 gene
16 genes 2 species 0 species
UBERON:0001981201620
putamen 1.0045.801 gene 0 gene
17 genes 1 species 0 species
UBERON:0001874101710
telencephalon 1.0051.718 genes 0 gene
10 genes 8 species 0 species
UBERON:0001893801080
utricle of membranous labyrinth -1.0056.270 gene
1 gene 17 genes 0 species
1 species UBERON:0001853011701
eyeball of camera-type eye 1.0050.404 genes 0 gene
14 genes 4 species 0 species
UBERON:0010230401440
right ovary -1.0044.510 gene
1 gene 17 genes 0 species
1 species UBERON:0002118011701
testis 0.6788.4515 genes 3 genes 0 gene
15 species 3 species UBERON:00004731530153
male reproductive system 1.0052.6116 genes 0 gene
2 genes 16 species 0 species
UBERON:00000791602160
autopod skin -1.007.220 gene
1 gene 17 genes 0 species
1 species UBERON:0015790011701
multi-cellular organism 1.0051.4818 genes 0 gene
0 gene
18 species 0 species
UBERON:00004681800180
ventricular zone 1.0087.262 genes 0 gene
16 genes 2 species 0 species
UBERON:0003053201620
presumptive atrioventricular canal 1.0050.001 gene 0 gene
17 genes 1 species 0 species
UBERON:0007279101710
skin epidermis 1.0056.331 gene 0 gene
17 genes 1 species 0 species
UBERON:0001003101710
embryonic post-anal tail -1.0018.030 gene
2 genes 16 genes 0 species
2 species UBERON:0007144021602
peripheral nervous system 1.0059.592 genes 0 gene
16 genes 2 species 0 species
UBERON:0000010201620
central nervous system 1.0053.6613 genes 0 gene
5 genes 13 species 0 species
UBERON:00010171305130
fibroblast -1.0029.920 gene
4 genes 14 genes 0 species
4 species CL:0000057041404
mesonephros 1.0053.063 genes 0 gene
15 genes 3 species 0 species
UBERON:0000080301530
iris -1.0044.790 gene
1 gene 17 genes 0 species
1 species UBERON:0001769011701
head 1.0067.368 genes 0 gene
10 genes 8 species 0 species
UBERON:0000033801080
choroid plexus epithelium -1.0039.040 gene
1 gene 17 genes 0 species
1 species UBERON:0003911011701
tongue muscle -1.0012.560 gene
1 gene 17 genes 0 species
1 species UBERON:0000378011701
trigeminal ganglion 1.0063.942 genes 0 gene
16 genes 2 species 0 species
UBERON:0001675201620
forebrain 1.0057.7712 genes 0 gene
6 genes 12 species 0 species
UBERON:00018901206120
vertebral column -1.0046.040 gene
1 gene 17 genes 0 species
1 species UBERON:0001130011701
caecum -1.0064.320 gene
3 genes 15 genes 0 species
3 species UBERON:0001153031503
diencephalon 1.0073.666 genes 0 gene
12 genes 6 species 0 species
UBERON:0001894601260
heart left ventricle, primary heart field -0.2063.532 genes 3 genes 13 genes 2 species 3 species UBERON:0002084, UBERON:0004140231323
olfactory bulb 0.0044.651 gene 1 gene 16 genes 1 species 1 species UBERON:0002264111611
lens of camera-type eye 1.0077.861 gene 0 gene
17 genes 1 species 0 species
UBERON:0000965101710
ear 1.0046.392 genes 0 gene
16 genes 2 species 0 species
UBERON:0001690201620
brain 0.4457.0713 genes 5 genes 0 gene
13 species 5 species UBERON:00009551350135
collection of basal ganglia 1.0061.102 genes 0 gene
16 genes 2 species 0 species
UBERON:0010011201620
smooth muscle tissue -0.3345.191 gene 2 genes 15 genes 1 species 2 species UBERON:0001135121512
upper arm skin -1.0055.580 gene
1 gene 17 genes 0 species
1 species UBERON:0004263011701
lens vesicle -1.0062.490 gene
1 gene 17 genes 0 species
1 species UBERON:0005426011701
heart right ventricle -1.0054.790 gene
3 genes 15 genes 0 species
3 species UBERON:0002080031503
lip 1.0057.751 gene 0 gene
17 genes 1 species 0 species
UBERON:0001833101710
ganglionic layer of retina -1.0056.650 gene
1 gene 17 genes 0 species
1 species UBERON:0001792011701
gonad 1.0061.5215 genes 0 gene
3 genes 15 species 0 species
UBERON:00009911503150
skin of hip -1.0041.880 gene
1 gene 17 genes 0 species
1 species UBERON:0001554011701
female gonad -0.5454.333 genes 10 genes 5 genes 3 species 10 species UBERON:00009923105310
internal ear 1.0084.492 genes 0 gene
16 genes 2 species 0 species
UBERON:0001846201620
ileum -0.6048.521 gene 4 genes 13 genes 1 species 4 species UBERON:0002116141314
mitral valve -1.0011.490 gene
1 gene 17 genes 0 species
1 species UBERON:0002135011701
olfactory lobe 1.0057.981 gene 0 gene
17 genes 1 species 0 species
UBERON:0005366101710
cartilage tissue -1.0062.870 gene
2 genes 16 genes 0 species
2 species UBERON:0002418021602
blastopore, primitive streak 1.0056.061 gene 0 gene
17 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101710
thyroid gland -0.2076.182 genes 3 genes 13 genes 2 species 3 species UBERON:0002046231323
optic cup 1.0065.382 genes 0 gene
16 genes 2 species 0 species
UBERON:0003072201620
adenohypophysis 0.0053.831 gene 1 gene 16 genes 1 species 1 species UBERON:0002196111611
midbrain tegmentum -1.0060.850 gene
1 gene 17 genes 0 species
1 species UBERON:0001943011701
larva 1.0057.921 gene 0 gene
17 genes 1 species 0 species
UBERON:0002548101710
bone element 1.0060.341 gene 0 gene
17 genes 1 species 0 species
UBERON:0001474101710
cerebellum -0.5459.073 genes 10 genes 5 genes 3 species 10 species UBERON:00020373105310
fundus of stomach -1.0052.260 gene
1 gene 17 genes 0 species
1 species UBERON:0001160011701
pineal body -1.0057.790 gene
1 gene 17 genes 0 species
1 species UBERON:0001905011701
dermis -1.0052.840 gene
1 gene 17 genes 0 species
1 species UBERON:0002067011701
cardiac ventricle 0.3364.872 genes 1 gene 15 genes 2 species 1 species UBERON:0002082211521
outflow tract 1.0047.281 gene 0 gene
17 genes 1 species 0 species
UBERON:0004145101710
saccule of membranous labyrinth 1.0047.221 gene 0 gene
17 genes 1 species 0 species
UBERON:0001854101710
camera-type eye 1.0088.234 genes 0 gene
14 genes 4 species 0 species
UBERON:0000019401440
caudal tuberculum, substantia nigra 0.0060.001 gene 1 gene 16 genes 1 species 1 species UBERON:2000633, UBERON:0002038111611
choroid plexus 0.0060.431 gene 1 gene 16 genes 1 species 1 species UBERON:0001886111611
thymus -0.6763.771 gene 5 genes 12 genes 1 species 5 species UBERON:0002370151215
forelimb, pectoral fin -1.0070.820 gene
1 gene 17 genes 0 species
1 species UBERON:0002102, UBERON:0000151011701
tendon 1.0065.471 gene 0 gene
17 genes 1 species 0 species
UBERON:0000043101710
motor neuron -1.0065.820 gene
1 gene 17 genes 0 species
1 species CL:0000100011701
epithelium of lens -1.0039.680 gene
1 gene 17 genes 0 species
1 species UBERON:0001803011701
olfactory cortex -1.0056.240 gene
1 gene 17 genes 0 species
1 species UBERON:0002894011701
right cardiac atrium 0.0024.821 gene 1 gene 16 genes 1 species 1 species UBERON:0002078111611
internal carotid artery -1.0040.890 gene
1 gene 17 genes 0 species
1 species UBERON:0001532011701
1st arch mandibular component 1.0041.151 gene 0 gene
17 genes 1 species 0 species
UBERON:0007237101710
endocardial endothelium -1.0012.040 gene
1 gene 17 genes 0 species
1 species UBERON:0005316011701
pre-chordal neural plate 1.0049.981 gene 0 gene
17 genes 1 species 0 species
UBERON:0003056101710
calcareous tooth 1.0068.411 gene 0 gene
17 genes 1 species 0 species
UBERON:0001091101710
Ammon's horn 0.5051.613 genes 1 gene 14 genes 3 species 1 species UBERON:0001954311431
epiblast (generic) 1.0062.031 gene 0 gene
17 genes 1 species 0 species
UBERON:0002532101710
adrenal cortex -1.0063.920 gene
2 genes 16 genes 0 species
2 species UBERON:0001235021602
sternocleidomastoid -1.0047.670 gene
1 gene 17 genes 0 species
1 species UBERON:0001128011701
brainstem 0.0049.671 gene 1 gene 16 genes 1 species 1 species UBERON:0002298111611
aorta 0.0065.322 genes 2 genes 14 genes 2 species 2 species UBERON:0000947221422
right kidney -1.0015.290 gene
1 gene 17 genes 0 species
1 species UBERON:0004539011701
outer nuclear layer of retina 1.0077.771 gene 0 gene
17 genes 1 species 0 species
UBERON:0001789101710
retina 0.5080.863 genes 1 gene 14 genes 3 species 1 species UBERON:0000966311431
somite 0.0064.261 gene 1 gene 16 genes 1 species 1 species UBERON:0002329111611
intestine 0.6037.514 genes 1 gene 13 genes 4 species 1 species UBERON:0000160411341
esophagus -0.5045.711 gene 3 genes 14 genes 1 species 3 species UBERON:0001043131413
myocardium -1.0075.490 gene
1 gene 17 genes 0 species
1 species UBERON:0002349011701
blastula 0.0030.761 gene 1 gene 16 genes 1 species 1 species UBERON:0000307111611
right testis 1.0080.061 gene 0 gene
17 genes 1 species 0 species
UBERON:0004534101710
blood -0.3357.802 genes 4 genes 12 genes 2 species 4 species UBERON:0000178241224
adipose tissue -0.3360.022 genes 4 genes 12 genes 2 species 4 species UBERON:0001013241224
kidney blood vessel 1.0066.661 gene 0 gene
17 genes 1 species 0 species
UBERON:0003517101710
embryonic head 1.0030.662 genes 0 gene
16 genes 2 species 0 species
UBERON:0008816201620
presumptive neural retina 1.0057.681 gene 0 gene
17 genes 1 species 0 species
UBERON:0005425101710
skeletal muscle tissue -0.3359.184 genes 8 genes 6 genes 4 species 8 species UBERON:000113448648
integumental system 1.0055.144 genes 0 gene
14 genes 4 species 0 species
UBERON:0002416401440
cardiovascular system 1.0055.148 genes 0 gene
10 genes 8 species 0 species
UBERON:0004535801080
spleen -0.4544.733 genes 8 genes 7 genes 3 species 8 species UBERON:000210638738
kidney 0.3357.2110 genes 5 genes 3 genes 10 species 5 species UBERON:00021131053105
intestinal epithelium -1.0060.520 gene
1 gene 17 genes 0 species
1 species UBERON:0001277011701
pericardium 0.0064.241 gene 1 gene 16 genes 1 species 1 species UBERON:0002407111611
lung, swim bladder 0.3356.178 genes 4 genes 6 genes 8 species 4 species UBERON:0002048, UBERON:000686084684
cardiac atrium -0.3364.651 gene 2 genes 15 genes 1 species 2 species UBERON:0002081121512
ventral horn of spinal cord 1.0047.541 gene 0 gene
17 genes 1 species 0 species
UBERON:0002257101710
islet of Langerhans -1.0037.260 gene
2 genes 16 genes 0 species
2 species UBERON:0000006021602
neural tube 1.0052.412 genes 0 gene
16 genes 2 species 0 species
UBERON:0001049201620
endocardial cushion -1.0058.530 gene
1 gene 17 genes 0 species
1 species UBERON:0002062011701
cerebral hemisphere 1.0050.948 genes 0 gene
10 genes 8 species 0 species
UBERON:0001869801080
appendicular skeleton 1.0063.631 gene 0 gene
17 genes 1 species 0 species
UBERON:0002091101710
pigmented layer of retina -1.0055.760 gene
2 genes 16 genes 0 species
2 species UBERON:0001782021602
1st arch maxillary component 1.0044.101 gene 0 gene
17 genes 1 species 0 species
UBERON:0007238101710
cerebellar cortex 0.0048.152 genes 2 genes 14 genes 2 species 2 species UBERON:0002129221422
cranial ganglion 1.0061.522 genes 0 gene
16 genes 2 species 0 species
UBERON:0001714201620
heart -0.0647.518 genes 9 genes 1 gene 8 species 9 species UBERON:000094889189
liver -0.2257.427 genes 11 genes 0 gene
7 species 11 species UBERON:00021077110711
cranium 1.0053.531 gene 0 gene
17 genes 1 species 0 species
UBERON:0003128101710
colon -0.3346.443 genes 6 genes 9 genes 3 species 6 species UBERON:000115536936
left testis 1.0080.481 gene 0 gene
17 genes 1 species 0 species
UBERON:0004533101710
muscle organ 0.7127.406 genes 1 gene 11 genes 6 species 1 species UBERON:0001630611161
striatum 1.0045.932 genes 0 gene
16 genes 2 species 0 species
UBERON:0002435201620
myocardium of ventricle -1.0046.890 gene
1 gene 17 genes 0 species
1 species UBERON:0001083011701
optic vesicle 1.0052.992 genes 0 gene
16 genes 2 species 0 species
UBERON:0004128201620
neurohypophysis -1.0025.880 gene
1 gene 17 genes 0 species
1 species UBERON:0002198011701
presomitic mesoderm -1.0044.380 gene
2 genes 16 genes 0 species
2 species UBERON:0003059021602
olfactory epithelium 1.0050.361 gene 0 gene
17 genes 1 species 0 species
UBERON:0001997101710
olfactory placode 1.0055.141 gene 0 gene
17 genes 1 species 0 species
UBERON:0003050101710
meninx 1.0068.411 gene 0 gene
17 genes 1 species 0 species
UBERON:0002360101710
dorsal root ganglion 0.0063.471 gene 1 gene 16 genes 1 species 1 species UBERON:0000044111611
aortic valve 1.0042.311 gene 0 gene
17 genes 1 species 0 species
UBERON:0002137101710
ciliary body -1.0051.870 gene
1 gene 17 genes 0 species
1 species UBERON:0001775011701
ear vesicle 1.0060.181 gene 0 gene
17 genes 1 species 0 species
UBERON:0003051101710
musculature 1.0065.386 genes 0 gene
12 genes 6 species 0 species
UBERON:0001015601260
gall bladder -1.0021.990 gene
2 genes 16 genes 0 species
2 species UBERON:0002110021602
atrioventricular valve -1.0058.280 gene
1 gene 17 genes 0 species
1 species UBERON:0002133011701
parathyroid gland, pharyngeal gill -1.0016.190 gene
1 gene 17 genes 0 species
1 species UBERON:0001132, UBERON:0000206011701
renal system 1.0075.3210 genes 0 gene
8 genes 10 species 0 species
UBERON:00010081008100
gingiva -1.0064.220 gene
1 gene 17 genes 0 species
1 species UBERON:0001828011701
peritoneum 1.0063.441 gene 0 gene
17 genes 1 species 0 species
UBERON:0002358101710
zygote 1.0052.591 gene 0 gene
17 genes 1 species 0 species
CL:0000365101710
respiratory system 1.0055.538 genes 0 gene
10 genes 8 species 0 species
UBERON:0001004801080
medulla oblongata -1.0080.290 gene
3 genes 15 genes 0 species
3 species UBERON:0001896031503
pylorus -1.0063.430 gene
1 gene 17 genes 0 species
1 species UBERON:0001166011701
caudate nucleus 1.0047.121 gene 0 gene
17 genes 1 species 0 species
UBERON:0001873101710
embryo 0.7166.266 genes 1 gene 11 genes 6 species 1 species UBERON:0000922611161
left ovary -1.0039.400 gene
1 gene 17 genes 0 species
1 species UBERON:0002119011701
rhombomere 1.0059.061 gene 0 gene
17 genes 1 species 0 species
UBERON:0001892101710

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