We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 19 genes 0 species
1 species UBERON:0002206011901
vestibulocochlear ganglion 1.0065.601 gene 0 gene
19 genes 1 species 0 species
UBERON:0002827101910
optic fissure -1.0040.620 gene
1 gene 19 genes 0 species
1 species UBERON:0005412011901
semi-lunar valve -1.0037.770 gene
1 gene 19 genes 0 species
1 species UBERON:0005623011901
brain blood vessel -1.0039.180 gene
1 gene 19 genes 0 species
1 species UBERON:0003499011901
hypothalamus -0.6042.461 gene 4 genes 15 genes 1 species 4 species UBERON:0001898141514
gastrula 0.3340.872 genes 1 gene 17 genes 2 species 1 species UBERON:0004734211721
cleaving embryo 1.0066.261 gene 0 gene
19 genes 1 species 0 species
UBERON:0007010101910
retinal neural layer 1.0095.881 gene 0 gene
19 genes 1 species 0 species
UBERON:0003902101910
midbrain 1.0029.231 gene 0 gene
19 genes 1 species 0 species
UBERON:0001891101910
cornea 1.0045.021 gene 0 gene
19 genes 1 species 0 species
UBERON:0000964101910
hindbrain 1.0030.132 genes 0 gene
18 genes 2 species 0 species
UBERON:0002028201820
stomach -0.2035.532 genes 3 genes 15 genes 2 species 3 species UBERON:0000945231523
inner nuclear layer of retina 1.0061.751 gene 0 gene
19 genes 1 species 0 species
UBERON:0001791101910
pituitary gland -0.6740.061 gene 5 genes 14 genes 1 species 5 species UBERON:0000007151415
pancreas 0.0062.112 genes 2 genes 16 genes 2 species 2 species UBERON:0001264221622
extra-ocular muscle -1.0041.400 gene
1 gene 19 genes 0 species
1 species UBERON:0001601011901
limb, paired fin 1.0027.441 gene 0 gene
19 genes 1 species 0 species
UBERON:0002101, UBERON:0002534101910
spinal cord mantle layer 1.0081.811 gene 0 gene
19 genes 1 species 0 species
UBERON:0009583101910
manus, pectoral fin radial bone -1.0055.320 gene
1 gene 19 genes 0 species
1 species UBERON:0002398, UBERON:2001586011901
putamen -1.0023.870 gene
1 gene 19 genes 0 species
1 species UBERON:0001874011901
telencephalon 1.0039.156 genes 0 gene
14 genes 6 species 0 species
UBERON:0001893601460
utricle of membranous labyrinth 1.0062.781 gene 0 gene
19 genes 1 species 0 species
UBERON:0001853101910
eyeball of camera-type eye 1.0091.345 genes 0 gene
15 genes 5 species 0 species
UBERON:0010230501550
right ovary -1.0027.920 gene
1 gene 19 genes 0 species
1 species UBERON:0002118011901
male reproductive system 1.0028.788 genes 0 gene
12 genes 8 species 0 species
UBERON:0000079801280
testis -0.0676.468 genes 9 genes 3 genes 8 species 9 species UBERON:000047389389
autopod skin -1.007.220 gene
1 gene 19 genes 0 species
1 species UBERON:0015790011901
multi-cellular organism 1.0071.9017 genes 0 gene
3 genes 17 species 0 species
UBERON:00004681703170
ventricular zone -1.0027.720 gene
2 genes 18 genes 0 species
2 species UBERON:0003053021802
skin epidermis 1.0038.631 gene 0 gene
19 genes 1 species 0 species
UBERON:0001003101910
embryonic post-anal tail -1.0018.060 gene
2 genes 18 genes 0 species
2 species UBERON:0007144021802
central nervous system 1.0037.298 genes 0 gene
12 genes 8 species 0 species
UBERON:0001017801280
fibroblast -0.5054.571 gene 3 genes 16 genes 1 species 3 species CL:0000057131613
mesonephros 1.0091.193 genes 0 gene
17 genes 3 species 0 species
UBERON:0000080301730
iris 1.0044.011 gene 0 gene
19 genes 1 species 0 species
UBERON:0001769101910
head 0.7178.236 genes 1 gene 13 genes 6 species 1 species UBERON:0000033611361
choroid plexus epithelium -1.0039.040 gene
1 gene 19 genes 0 species
1 species UBERON:0003911011901
tongue muscle -1.0012.560 gene
1 gene 19 genes 0 species
1 species UBERON:0000378011901
geniculate ganglion 1.0066.651 gene 0 gene
19 genes 1 species 0 species
UBERON:0001700101910
trigeminal ganglion 1.0054.311 gene 0 gene
19 genes 1 species 0 species
UBERON:0001675101910
forebrain 1.0035.336 genes 0 gene
14 genes 6 species 0 species
UBERON:0001890601460
vertebral column -1.0046.040 gene
1 gene 19 genes 0 species
1 species UBERON:0001130011901
caecum -1.0011.870 gene
2 genes 18 genes 0 species
2 species UBERON:0001153021802
heart left ventricle, primary heart field -1.0039.640 gene
4 genes 16 genes 0 species
4 species UBERON:0002084, UBERON:0004140041604
olfactory bulb 0.0037.781 gene 1 gene 18 genes 1 species 1 species UBERON:0002264111811
lens of camera-type eye 1.0063.401 gene 0 gene
19 genes 1 species 0 species
UBERON:0000965101910
ear 1.0050.421 gene 0 gene
19 genes 1 species 0 species
UBERON:0001690101910
brain 0.0750.048 genes 7 genes 5 genes 8 species 7 species UBERON:000095587587
smooth muscle tissue -1.0019.550 gene
3 genes 17 genes 0 species
3 species UBERON:0001135031703
heart right ventricle -1.008.980 gene
1 gene 19 genes 0 species
1 species UBERON:0002080011901
lip -1.0040.070 gene
1 gene 19 genes 0 species
1 species UBERON:0001833011901
female gonad -0.1758.365 genes 7 genes 8 genes 5 species 7 species UBERON:000099257857
ileum -0.6035.061 gene 4 genes 15 genes 1 species 4 species UBERON:0002116141514
mitral valve -1.0011.490 gene
1 gene 19 genes 0 species
1 species UBERON:0002135011901
cartilage tissue -1.008.620 gene
1 gene 19 genes 0 species
1 species UBERON:0002418011901
blastopore, primitive streak -1.0040.630 gene
1 gene 19 genes 0 species
1 species UBERON:0000100, UBERON:0004341011901
thyroid gland -1.0021.800 gene
3 genes 17 genes 0 species
3 species UBERON:0002046031703
adenohypophysis -1.0015.520 gene
2 genes 18 genes 0 species
2 species UBERON:0002196021802
larva 1.0046.371 gene 0 gene
19 genes 1 species 0 species
UBERON:0002548101910
bone element 1.0045.073 genes 0 gene
17 genes 3 species 0 species
UBERON:0001474301730
cerebellum -0.6738.282 genes 10 genes 8 genes 2 species 10 species UBERON:00020372108210
fundus of stomach -1.0025.400 gene
1 gene 19 genes 0 species
1 species UBERON:0001160011901
pineal body -1.0040.470 gene
1 gene 19 genes 0 species
1 species UBERON:0001905011901
dermis -1.0038.570 gene
1 gene 19 genes 0 species
1 species UBERON:0002067011901
cardiac ventricle 1.0041.791 gene 0 gene
19 genes 1 species 0 species
UBERON:0002082101910
outflow tract -1.0036.620 gene
1 gene 19 genes 0 species
1 species UBERON:0004145011901
camera-type eye 1.0067.995 genes 0 gene
15 genes 5 species 0 species
UBERON:0000019501550
caudal tuberculum, substantia nigra 0.0041.091 gene 1 gene 18 genes 1 species 1 species UBERON:2000633, UBERON:0002038111811
choroid plexus -1.0023.420 gene
1 gene 19 genes 0 species
1 species UBERON:0001886011901
thymus -0.5038.371 gene 3 genes 16 genes 1 species 3 species UBERON:0002370131613
epithelium of lens 1.0068.361 gene 0 gene
19 genes 1 species 0 species
UBERON:0001803101910
right cardiac atrium -1.008.440 gene
1 gene 19 genes 0 species
1 species UBERON:0002078011901
internal carotid artery -1.0040.890 gene
1 gene 19 genes 0 species
1 species UBERON:0001532011901
1st arch mandibular component -1.0041.150 gene
1 gene 19 genes 0 species
1 species UBERON:0007237011901
endocardial endothelium -1.0012.040 gene
1 gene 19 genes 0 species
1 species UBERON:0005316011901
Ammon's horn -0.5037.751 gene 3 genes 16 genes 1 species 3 species UBERON:0001954131613
midbrain mantle layer 1.0081.691 gene 0 gene
19 genes 1 species 0 species
UBERON:0009581101910
epiblast (generic) 1.0030.981 gene 0 gene
19 genes 1 species 0 species
UBERON:0002532101910
adrenal cortex -1.0013.170 gene
1 gene 19 genes 0 species
1 species UBERON:0001235011901
glossopharyngeal ganglion 1.0068.171 gene 0 gene
19 genes 1 species 0 species
UBERON:0001701101910
sternocleidomastoid -1.0037.590 gene
1 gene 19 genes 0 species
1 species UBERON:0001128011901
brainstem -0.3338.791 gene 2 genes 17 genes 1 species 2 species UBERON:0002298121712
aorta -0.3339.731 gene 2 genes 17 genes 1 species 2 species UBERON:0000947121712
right kidney 1.0036.161 gene 0 gene
19 genes 1 species 0 species
UBERON:0004539101910
outer nuclear layer of retina 1.0074.061 gene 0 gene
19 genes 1 species 0 species
UBERON:0001789101910
retina 0.6087.674 genes 1 gene 15 genes 4 species 1 species UBERON:0000966411541
intestine 0.0023.992 genes 2 genes 16 genes 2 species 2 species UBERON:0000160221622
esophagus -0.5045.021 gene 3 genes 16 genes 1 species 3 species UBERON:0001043131613
blastula 1.0057.954 genes 0 gene
16 genes 4 species 0 species
UBERON:0000307401640
right testis -1.0027.920 gene
1 gene 19 genes 0 species
1 species UBERON:0004534011901
blood -0.7542.121 gene 7 genes 12 genes 1 species 7 species UBERON:0000178171217
adipose tissue -0.6739.101 gene 5 genes 14 genes 1 species 5 species UBERON:0001013151415
embryonic head -1.001.750 gene
1 gene 19 genes 0 species
1 species UBERON:0008816011901
skeletal muscle tissue -1.0036.680 gene
12 genes 8 genes 0 species
12 species UBERON:00011340128012
spleen -0.6039.642 genes 8 genes 10 genes 2 species 8 species UBERON:0002106281028
kidney -0.5036.413 genes 9 genes 8 genes 3 species 9 species UBERON:000211339839
lung, swim bladder -0.8338.311 gene 11 genes 8 genes 1 species 11 species UBERON:0002048, UBERON:00068601118111
cardiac atrium 0.0041.701 gene 1 gene 18 genes 1 species 1 species UBERON:0002081111811
ventral horn of spinal cord 1.0046.621 gene 0 gene
19 genes 1 species 0 species
UBERON:0002257101910
islet of Langerhans 0.0039.021 gene 1 gene 18 genes 1 species 1 species UBERON:0000006111811
neural tube 1.0026.761 gene 0 gene
19 genes 1 species 0 species
UBERON:0001049101910
endocardial cushion -1.0039.650 gene
1 gene 19 genes 0 species
1 species UBERON:0002062011901
cerebral hemisphere 1.0039.786 genes 0 gene
14 genes 6 species 0 species
UBERON:0001869601460
pigmented layer of retina 1.0072.481 gene 0 gene
19 genes 1 species 0 species
UBERON:0001782101910
1st arch maxillary component -1.0043.260 gene
1 gene 19 genes 0 species
1 species UBERON:0007238011901
vagus X ganglion 1.0063.621 gene 0 gene
19 genes 1 species 0 species
UBERON:0005362101910
cerebellar cortex -0.5043.101 gene 3 genes 16 genes 1 species 3 species UBERON:0002129131613
heart -0.7334.482 genes 13 genes 5 genes 2 species 13 species UBERON:00009482135213
liver -0.0649.118 genes 9 genes 3 genes 8 species 9 species UBERON:000210789389
colon -0.5035.592 genes 6 genes 12 genes 2 species 6 species UBERON:0001155261226
left testis -1.0028.640 gene
1 gene 19 genes 0 species
1 species UBERON:0004533011901
muscle organ 0.5024.033 genes 1 gene 16 genes 3 species 1 species UBERON:0001630311631
striatum 1.0039.321 gene 0 gene
19 genes 1 species 0 species
UBERON:0002435101910
myocardium of ventricle -1.0043.480 gene
1 gene 19 genes 0 species
1 species UBERON:0001083011901
neurohypophysis -1.009.580 gene
1 gene 19 genes 0 species
1 species UBERON:0002198011901
presomitic mesoderm -1.0042.410 gene
1 gene 19 genes 0 species
1 species UBERON:0003059011901
olfactory epithelium -1.0038.600 gene
1 gene 19 genes 0 species
1 species UBERON:0001997011901
dorsal root ganglion 1.0038.031 gene 0 gene
19 genes 1 species 0 species
UBERON:0000044101910
aortic valve -1.0042.310 gene
1 gene 19 genes 0 species
1 species UBERON:0002137011901
ciliary body -1.0043.090 gene
1 gene 19 genes 0 species
1 species UBERON:0001775011901
ear vesicle -1.0039.800 gene
1 gene 19 genes 0 species
1 species UBERON:0003051011901
gall bladder -1.0021.990 gene
2 genes 18 genes 0 species
2 species UBERON:0002110021802
atrioventricular valve -1.0039.640 gene
1 gene 19 genes 0 species
1 species UBERON:0002133011901
parathyroid gland, pharyngeal gill -1.0014.720 gene
1 gene 19 genes 0 species
1 species UBERON:0001132, UBERON:0000206011901
zygote 1.0094.871 gene 0 gene
19 genes 1 species 0 species
CL:0000365101910
medulla oblongata 0.005.601 gene 1 gene 18 genes 1 species 1 species UBERON:0001896111811
caudate nucleus -1.0028.510 gene
1 gene 19 genes 0 species
1 species UBERON:0001873011901
embryo 0.0041.664 genes 4 genes 12 genes 4 species 4 species UBERON:0000922441244
left ovary -1.0025.950 gene
1 gene 19 genes 0 species
1 species UBERON:0002119011901

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