We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
gall bladder 1.0082.552 genes 0 gene
16 genes 2 species 0 species
UBERON:0002110201620
female gonad 1.0086.0112 genes 0 gene
6 genes 12 species 0 species
UBERON:00009921206120
intestine 1.0077.989 genes 0 gene
9 genes 9 species 0 species
UBERON:000016090990
neurohypophysis 1.0045.451 gene 0 gene
17 genes 1 species 0 species
UBERON:0002198101710
penis 1.0082.942 genes 0 gene
16 genes 2 species 0 species
UBERON:0000989201620
aortic valve 1.0058.621 gene 0 gene
17 genes 1 species 0 species
UBERON:0002137101710
embryo 1.0091.369 genes 0 gene
9 genes 9 species 0 species
UBERON:000092290990
adipose tissue 1.0082.946 genes 0 gene
12 genes 6 species 0 species
UBERON:0001013601260
choroid plexus 1.0068.892 genes 0 gene
16 genes 2 species 0 species
UBERON:0001886201620
smooth muscle tissue 1.0089.913 genes 0 gene
15 genes 3 species 0 species
UBERON:0001135301530
right lobe of thyroid gland 1.0079.641 gene 0 gene
17 genes 1 species 0 species
UBERON:0001119101710
trachea 1.0086.002 genes 0 gene
16 genes 2 species 0 species
UBERON:0003126201620
dorsal root ganglion 0.0088.521 gene 1 gene 16 genes 1 species 1 species UBERON:0000044111611
epithelium of small intestine -1.0039.860 gene
1 gene 17 genes 0 species
1 species UBERON:0001902011701
intercostal muscle 0.0047.201 gene 1 gene 16 genes 1 species 1 species UBERON:0001111111611
vertebral column -1.0046.040 gene
1 gene 17 genes 0 species
1 species UBERON:0001130011701
1st arch maxillary component 1.0044.471 gene 0 gene
17 genes 1 species 0 species
UBERON:0007238101710
pericardium 1.0087.411 gene 0 gene
17 genes 1 species 0 species
UBERON:0002407101710
internal carotid artery -1.0040.890 gene
1 gene 17 genes 0 species
1 species UBERON:0001532011701
pigmented layer of retina 0.0075.001 gene 1 gene 16 genes 1 species 1 species UBERON:0001782111611
retina 0.5049.223 genes 1 gene 14 genes 3 species 1 species UBERON:0000966311431
1st arch mandibular component -1.0041.150 gene
1 gene 17 genes 0 species
1 species UBERON:0007237011701
thymus 0.6077.364 genes 1 gene 13 genes 4 species 1 species UBERON:0002370411341
aorta 1.0090.594 genes 0 gene
14 genes 4 species 0 species
UBERON:0000947401440
parotid gland 0.0066.481 gene 1 gene 16 genes 1 species 1 species UBERON:0001831111611
endocardial cushion -1.0055.520 gene
1 gene 17 genes 0 species
1 species UBERON:0002062011701
striatum 1.0040.882 genes 0 gene
16 genes 2 species 0 species
UBERON:0002435201620
tendon 1.0080.911 gene 0 gene
17 genes 1 species 0 species
UBERON:0000043101710
cardiac atrium 1.0090.684 genes 0 gene
14 genes 4 species 0 species
UBERON:0002081401440
metanephric ureteric bud -1.0040.270 gene
1 gene 17 genes 0 species
1 species UBERON:0005080011701
head 1.0060.048 genes 0 gene
10 genes 8 species 0 species
UBERON:0000033801080
sternocleidomastoid -1.0050.020 gene
1 gene 17 genes 0 species
1 species UBERON:0001128011701
globus pallidus 0.0089.751 gene 1 gene 16 genes 1 species 1 species UBERON:0001875111611
ureter smooth muscle -1.0040.550 gene
1 gene 17 genes 0 species
1 species UBERON:0009919011701
renal corpuscle 1.0049.412 genes 0 gene
16 genes 2 species 0 species
UBERON:0001229201620
lung 1.0080.4912 genes 0 gene
6 genes 12 species 0 species
UBERON:00020481206120
cerebral hemisphere 1.0045.0514 genes 0 gene
4 genes 14 species 0 species
UBERON:00018691404140
Wulst, primary visual cortex 1.0077.704 genes 0 gene
14 genes 4 species 0 species
UBERON:0014756, UBERON:0002436401440
metanephros 1.0087.304 genes 0 gene
14 genes 4 species 0 species
UBERON:0000081401440
inferior vagus X ganglion 1.0087.741 gene 0 gene
17 genes 1 species 0 species
UBERON:0005363101710
stomach 1.0077.436 genes 0 gene
12 genes 6 species 0 species
UBERON:0000945601260
ciliary body -1.0037.490 gene
1 gene 17 genes 0 species
1 species UBERON:0001775011701
male reproductive system 1.0052.1718 genes 0 gene
0 gene
18 species 0 species
UBERON:00000791800180
presomitic mesoderm -1.0042.310 gene
1 gene 17 genes 0 species
1 species UBERON:0003059011701
skeletal muscle tissue 0.8376.2611 genes 1 gene 6 genes 11 species 1 species UBERON:00011341116111
neural tube 1.0072.142 genes 0 gene
16 genes 2 species 0 species
UBERON:0001049201620
testis 0.8978.1617 genes 1 gene 0 gene
17 species 1 species UBERON:00004731710171
eyeball of camera-type eye 1.0064.765 genes 0 gene
13 genes 5 species 0 species
UBERON:0010230501350
vault of skull 1.0041.001 gene 0 gene
17 genes 1 species 0 species
UBERON:0004339101710
caudate nucleus 1.0084.431 gene 0 gene
17 genes 1 species 0 species
UBERON:0001873101710
medulla oblongata 1.0086.902 genes 0 gene
16 genes 2 species 0 species
UBERON:0001896201620
adrenal gland 1.0089.316 genes 0 gene
12 genes 6 species 0 species
UBERON:0002369601260
left cardiac atrium 1.0050.821 gene 0 gene
17 genes 1 species 0 species
UBERON:0002079101710
gingiva 1.0072.761 gene 0 gene
17 genes 1 species 0 species
UBERON:0001828101710
gastrula -1.0090.210 gene
1 gene 17 genes 0 species
1 species UBERON:0004734011701
extra-ocular muscle -1.0049.540 gene
1 gene 17 genes 0 species
1 species UBERON:0001601011701
right cardiac atrium 1.0052.492 genes 0 gene
16 genes 2 species 0 species
UBERON:0002078201620
cranial nerve II 1.0077.811 gene 0 gene
17 genes 1 species 0 species
UBERON:0000941101710
pituitary gland 1.0072.607 genes 0 gene
11 genes 7 species 0 species
UBERON:0000007701170
milk 1.0028.631 gene 0 gene
17 genes 1 species 0 species
UBERON:0001913101710
cochlea 1.0039.061 gene 0 gene
17 genes 1 species 0 species
UBERON:0001844101710
muscle organ 1.0074.2713 genes 0 gene
5 genes 13 species 0 species
UBERON:00016301305130
sciatic nerve 0.0038.881 gene 1 gene 16 genes 1 species 1 species UBERON:0001322111611
heart 1.0088.2316 genes 0 gene
2 genes 16 species 0 species
UBERON:00009481602160
autopod skin 1.0043.221 gene 0 gene
17 genes 1 species 0 species
UBERON:0015790101710
liver 1.0068.9018 genes 0 gene
0 gene
18 species 0 species
UBERON:00021071800180
skin of leg 1.0077.041 gene 0 gene
17 genes 1 species 0 species
UBERON:0001511101710
adrenal cortex 1.0093.222 genes 0 gene
16 genes 2 species 0 species
UBERON:0001235201620
right testis 1.0069.811 gene 0 gene
17 genes 1 species 0 species
UBERON:0004534101710
epithelial cell of pancreas 1.0075.501 gene 0 gene
17 genes 1 species 0 species
CL:0000083101710
retinal neural layer -1.0044.730 gene
1 gene 17 genes 0 species
1 species UBERON:0003902011701
colon 1.0077.589 genes 0 gene
9 genes 9 species 0 species
UBERON:000115590990
yolk sac 1.0070.271 gene 0 gene
17 genes 1 species 0 species
UBERON:0001040101710
laryngeal cartilage 1.0056.821 gene 0 gene
17 genes 1 species 0 species
UBERON:0001739101710
small intestine 1.0076.545 genes 0 gene
13 genes 5 species 0 species
UBERON:0002108501350
tongue 1.0079.503 genes 0 gene
15 genes 3 species 0 species
UBERON:0001723301530
hypothalamus 1.0078.906 genes 0 gene
12 genes 6 species 0 species
UBERON:0001898601260
saliva-secreting gland 0.5074.663 genes 1 gene 14 genes 3 species 1 species UBERON:0001044311431
synovial membrane of synovial joint 1.0087.161 gene 0 gene
17 genes 1 species 0 species
UBERON:0002018101710
ear vesicle -1.0056.780 gene
1 gene 17 genes 0 species
1 species UBERON:0003051011701
zygote 1.0089.891 gene 0 gene
17 genes 1 species 0 species
CL:0000365101710
metanephric mesenchyme -1.0039.960 gene
1 gene 17 genes 0 species
1 species UBERON:0003220011701
metanephric glomerulus 1.0082.741 gene 0 gene
17 genes 1 species 0 species
UBERON:0004736101710
peritoneum 1.0087.562 genes 0 gene
16 genes 2 species 0 species
UBERON:0002358201620
cerebellar cortex 1.0072.894 genes 0 gene
14 genes 4 species 0 species
UBERON:0002129401440
myocardium of ventricle 0.3353.532 genes 1 gene 15 genes 2 species 1 species UBERON:0001083211521
submandibular gland -1.0068.920 gene
1 gene 17 genes 0 species
1 species UBERON:0001736011701
epithelium of esophagus 1.0084.661 gene 0 gene
17 genes 1 species 0 species
UBERON:0001976101710
mitral valve 1.0059.471 gene 0 gene
17 genes 1 species 0 species
UBERON:0002135101710
pancreas 1.0076.874 genes 0 gene
14 genes 4 species 0 species
UBERON:0001264401440
bronchial epithelial cell 1.0068.731 gene 0 gene
17 genes 1 species 0 species
CL:0002328101710
metanephros cortex 1.0056.022 genes 0 gene
16 genes 2 species 0 species
UBERON:0010533201620
substantia nigra 0.0083.251 gene 1 gene 16 genes 1 species 1 species UBERON:0002038111611
cleaving embryo -1.0045.820 gene
1 gene 17 genes 0 species
1 species UBERON:0007010011701
camera-type eye 1.0042.395 genes 0 gene
13 genes 5 species 0 species
UBERON:0000019501350
heart right ventricle 1.0087.022 genes 0 gene
16 genes 2 species 0 species
UBERON:0002080201620
ileum 0.3351.424 genes 2 genes 12 genes 4 species 2 species UBERON:0002116421242
skin of hip 1.0077.301 gene 0 gene
17 genes 1 species 0 species
UBERON:0001554101710
olfactory epithelium -1.0038.600 gene
1 gene 17 genes 0 species
1 species UBERON:0001997011701
pylorus 1.0082.081 gene 0 gene
17 genes 1 species 0 species
UBERON:0001166101710
anterior leaflet of mitral valve, atrioventricular valve, tricuspid valve cusp 0.0055.371 gene 1 gene 16 genes 1 species 1 species UBERON:0014854, UBERON:0002133, UBERON:0005998111611
infraspinatus muscle, supracoracoideus muscle, supraspinatus muscle 1.0058.981 gene 0 gene
17 genes 1 species 0 species
UBERON:0001477, UBERON:0014840, UBERON:0002383101710
left ovary 1.0090.041 gene 0 gene
17 genes 1 species 0 species
UBERON:0002119101710
telencephalon 1.0086.0114 genes 0 gene
4 genes 14 species 0 species
UBERON:00018931404140
ear 1.0038.822 genes 0 gene
16 genes 2 species 0 species
UBERON:0001690201620
putamen 1.0085.141 gene 0 gene
17 genes 1 species 0 species
UBERON:0001874101710
cartilage tissue 1.0088.263 genes 0 gene
15 genes 3 species 0 species
UBERON:0002418301530
mammary duct 1.0085.701 gene 0 gene
17 genes 1 species 0 species
UBERON:0001765101710
skin of external ear -1.0038.230 gene
1 gene 17 genes 0 species
1 species UBERON:0001459011701
periodontal ligament 1.0082.151 gene 0 gene
17 genes 1 species 0 species
UBERON:0008266101710
bronchus 1.0084.762 genes 0 gene
16 genes 2 species 0 species
UBERON:0002185201620
cornea -1.0038.570 gene
1 gene 17 genes 0 species
1 species UBERON:0000964011701
oviduct shell gland, uterus 1.0092.339 genes 0 gene
9 genes 9 species 0 species
UBERON:0008975, UBERON:000099590990
mammillary body -1.0041.270 gene
1 gene 17 genes 0 species
1 species UBERON:0002206011701
inferior olivary complex 1.0083.571 gene 0 gene
17 genes 1 species 0 species
UBERON:0002127101710
hindbrain 1.0073.0115 genes 0 gene
3 genes 15 species 0 species
UBERON:00020281503150
left testis 1.0069.991 gene 0 gene
17 genes 1 species 0 species
UBERON:0004533101710
iris 0.0057.681 gene 1 gene 16 genes 1 species 1 species UBERON:0001769111611
optic fissure -1.0040.620 gene
1 gene 17 genes 0 species
1 species UBERON:0005412011701
midbrain 1.0083.132 genes 0 gene
16 genes 2 species 0 species
UBERON:0001891201620
gingival epithelium 1.0070.501 gene 0 gene
17 genes 1 species 0 species
UBERON:0001949101710
tongue muscle -1.0032.120 gene
1 gene 17 genes 0 species
1 species UBERON:0000378011701
urinary bladder 1.0083.694 genes 0 gene
14 genes 4 species 0 species
UBERON:0001255401440
central nervous system 1.0077.5218 genes 0 gene
0 gene
18 species 0 species
UBERON:00010171800180
heart left ventricle 1.0087.535 genes 0 gene
13 genes 5 species 0 species
UBERON:0002084501350
limb 1.0074.659 genes 0 gene
9 genes 9 species 0 species
UBERON:000210190990
skin epidermis 0.3345.122 genes 1 gene 15 genes 2 species 1 species UBERON:0001003211521
fibroblast 1.0076.974 genes 0 gene
14 genes 4 species 0 species
CL:0000057401440
left lobe of thyroid gland 1.0079.921 gene 0 gene
17 genes 1 species 0 species
UBERON:0001120101710
spleen 1.0075.8610 genes 0 gene
8 genes 10 species 0 species
UBERON:00021061008100
pleura 1.0088.711 gene 0 gene
17 genes 1 species 0 species
UBERON:0000977101710
large intestine 1.0071.609 genes 0 gene
9 genes 9 species 0 species
UBERON:000005990990
kidney 1.0076.8318 genes 0 gene
0 gene
18 species 0 species
UBERON:00021131800180
kidney epithelium 1.0065.912 genes 0 gene
16 genes 2 species 0 species
UBERON:0004819201620
blood 0.0058.334 genes 4 genes 10 genes 4 species 4 species UBERON:0000178441044
upper leg skin 1.0071.451 gene 0 gene
17 genes 1 species 0 species
UBERON:0004262101710
amygdala -0.3385.071 gene 2 genes 15 genes 1 species 2 species UBERON:0001876121512
lip 1.0064.481 gene 0 gene
17 genes 1 species 0 species
UBERON:0001833101710
female reproductive system 1.0091.2315 genes 0 gene
3 genes 15 species 0 species
UBERON:00004741503150
embryonic head 1.0066.482 genes 0 gene
16 genes 2 species 0 species
UBERON:0008816201620
islet of Langerhans 1.0071.552 genes 0 gene
16 genes 2 species 0 species
UBERON:0000006201620
outflow tract 1.0044.302 genes 0 gene
16 genes 2 species 0 species
UBERON:0004145201620
dentate gyrus of hippocampal formation 1.0041.231 gene 0 gene
17 genes 1 species 0 species
UBERON:0001885101710
dermis 1.0050.301 gene 0 gene
17 genes 1 species 0 species
UBERON:0002067101710
epithelium of bronchus 1.0074.622 genes 0 gene
16 genes 2 species 0 species
UBERON:0002031201620
forebrain 1.0074.8314 genes 0 gene
4 genes 14 species 0 species
UBERON:00018901404140
right ovary 1.0089.651 gene 0 gene
17 genes 1 species 0 species
UBERON:0002118101710
carotid body -1.0042.150 gene
1 gene 17 genes 0 species
1 species UBERON:0001629011701
ventral horn of spinal cord -1.0038.710 gene
1 gene 17 genes 0 species
1 species UBERON:0002257011701
neocortex 1.0069.9614 genes 0 gene
4 genes 14 species 0 species
UBERON:00019501404140
Ammon's horn 1.0082.354 genes 0 gene
14 genes 4 species 0 species
UBERON:0001954401440
duodenum 0.6069.574 genes 1 gene 13 genes 4 species 1 species UBERON:0002114411341
cerebellum 1.0073.8515 genes 0 gene
3 genes 15 species 0 species
UBERON:00020371503150
primitive streak -1.0040.630 gene
1 gene 17 genes 0 species
1 species UBERON:0004341011701
bone element 1.0037.955 genes 0 gene
13 genes 5 species 0 species
UBERON:0001474501350
endocardial endothelium 1.0065.511 gene 0 gene
17 genes 1 species 0 species
UBERON:0005316101710
ventricular zone 1.0097.132 genes 0 gene
16 genes 2 species 0 species
UBERON:0003053201620
brain blood vessel -1.0039.180 gene
1 gene 17 genes 0 species
1 species UBERON:0003499011701
embryonic post-anal tail 1.0073.792 genes 0 gene
16 genes 2 species 0 species
UBERON:0007144201620
lens of camera-type eye 1.0065.672 genes 0 gene
16 genes 2 species 0 species
UBERON:0000965201620
seminiferous tubule of testis -1.0046.850 gene
1 gene 17 genes 0 species
1 species UBERON:0001343011701
semi-lunar valve 1.0037.771 gene 0 gene
17 genes 1 species 0 species
UBERON:0005623101710
epithelium of lens -1.0039.680 gene
1 gene 17 genes 0 species
1 species UBERON:0001803011701
multi-cellular organism 1.0074.1118 genes 0 gene
0 gene
18 species 0 species
UBERON:00004681800180
choroid plexus epithelium 0.0086.811 gene 1 gene 16 genes 1 species 1 species UBERON:0003911111611
oviduct epithelium 1.0073.522 genes 0 gene
16 genes 2 species 0 species
UBERON:0004804201620
esophagus 1.0084.804 genes 0 gene
14 genes 4 species 0 species
UBERON:0001043401440
brain 1.0082.7218 genes 0 gene
0 gene
18 species 0 species
UBERON:00009551800180
brainstem 1.0049.215 genes 0 gene
13 genes 5 species 0 species
UBERON:0002298501350
cardiac ventricle 1.0091.325 genes 0 gene
13 genes 5 species 0 species
UBERON:0002082501350
amniotic fluid 1.0062.501 gene 0 gene
17 genes 1 species 0 species
UBERON:0000173101710
upper arm skin 1.0081.301 gene 0 gene
17 genes 1 species 0 species
UBERON:0004263101710
right kidney 1.0066.031 gene 0 gene
17 genes 1 species 0 species
UBERON:0004539101710
caecum 1.0088.733 genes 0 gene
15 genes 3 species 0 species
UBERON:0001153301530
myocardium 1.0085.572 genes 0 gene
16 genes 2 species 0 species
UBERON:0002349201620
trigeminal ganglion 0.0089.361 gene 1 gene 16 genes 1 species 1 species UBERON:0001675111611
olfactory bulb 1.0088.663 genes 0 gene
15 genes 3 species 0 species
UBERON:0002264301530
fundus of stomach 1.0084.461 gene 0 gene
17 genes 1 species 0 species
UBERON:0001160101710
pineal body -1.0040.470 gene
1 gene 17 genes 0 species
1 species UBERON:0001905011701
jejunum 1.0079.125 genes 0 gene
13 genes 5 species 0 species
UBERON:0002115501350
cerebral cortex 1.0083.5814 genes 0 gene
4 genes 14 species 0 species
UBERON:00009561404140
ureter 0.0065.451 gene 1 gene 16 genes 1 species 1 species UBERON:0000056111611
adenohypophysis 1.0074.492 genes 0 gene
16 genes 2 species 0 species
UBERON:0002196201620
male germ cell 1.0085.616 genes 0 gene
12 genes 6 species 0 species
CL:0000015601260
bone marrow 0.6773.025 genes 1 gene 12 genes 5 species 1 species UBERON:0002371511251
epiblast (generic) 1.0062.411 gene 0 gene
17 genes 1 species 0 species
UBERON:0002532101710
thyroid gland 1.0079.854 genes 0 gene
14 genes 4 species 0 species
UBERON:0002046401440

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