We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
otic placode -1.0060.030 gene
1 gene 3 genes 0 species
1 species UBERON:000306901301
neocortex 1.0066.364 genes 0 gene
0 gene
4 species 0 species
UBERON:000195040040
substantia nigra -1.0055.360 gene
1 gene 3 genes 0 species
1 species UBERON:000203801301
lymph node 1.0064.521 gene 0 gene
3 genes 1 species 0 species
UBERON:000002910310
urinary bladder 1.0061.241 gene 0 gene
3 genes 1 species 0 species
UBERON:000125510310
uterine cervix 1.0071.812 genes 0 gene
2 genes 2 species 0 species
UBERON:000000220220
cleaving embryo 1.0072.051 gene 0 gene
3 genes 1 species 0 species
UBERON:000701010310
temporalis muscle -1.0063.490 gene
1 gene 3 genes 0 species
1 species UBERON:000159801301
camera-type eye 1.0072.151 gene 0 gene
3 genes 1 species 0 species
UBERON:000001910310
mammillary body 1.0059.751 gene 0 gene
3 genes 1 species 0 species
UBERON:000220610310
autopod skin 1.0034.161 gene 0 gene
3 genes 1 species 0 species
UBERON:001579010310
knee joint -1.0065.370 gene
1 gene 3 genes 0 species
1 species UBERON:000148501301
olfactory epithelium 1.0074.191 gene 0 gene
3 genes 1 species 0 species
UBERON:000199710310
heart right ventricle -1.0071.200 gene
1 gene 3 genes 0 species
1 species UBERON:000208001301
myocardium of ventricle 1.0067.031 gene 0 gene
3 genes 1 species 0 species
UBERON:000108310310
seminiferous tubule of testis 1.0071.041 gene 0 gene
3 genes 1 species 0 species
UBERON:000134310310
pancreas 1.0063.302 genes 0 gene
2 genes 2 species 0 species
UBERON:000126420220
ileum 1.0055.302 genes 0 gene
2 genes 2 species 0 species
UBERON:000211620220
hypothalamus 1.0063.792 genes 0 gene
2 genes 2 species 0 species
UBERON:000189820220
thyroid gland 1.0037.021 gene 0 gene
3 genes 1 species 0 species
UBERON:000204610310
limb 1.0074.423 genes 0 gene
1 gene 3 species 0 species
UBERON:000210130130
placenta 1.0076.141 gene 0 gene
3 genes 1 species 0 species
UBERON:000198710310
cerebellum 1.0063.933 genes 0 gene
1 gene 3 species 0 species
UBERON:000203730130
bone element 1.0062.331 gene 0 gene
3 genes 1 species 0 species
UBERON:000147410310
iris -1.0060.320 gene
1 gene 3 genes 0 species
1 species UBERON:000176901301
diaphragm 1.0061.851 gene 0 gene
3 genes 1 species 0 species
UBERON:000110310310
zygote 1.0070.131 gene 0 gene
3 genes 1 species 0 species
CL:000036510310
choroid plexus of fourth ventricle -1.0046.720 gene
1 gene 3 genes 0 species
1 species UBERON:000229001301
medulla oblongata 1.0049.671 gene 0 gene
3 genes 1 species 0 species
UBERON:000189610310
cardiac ventricle 1.0058.412 genes 0 gene
2 genes 2 species 0 species
UBERON:000208220220
cornea 1.0058.861 gene 0 gene
3 genes 1 species 0 species
UBERON:000096410310
hindbrain 1.0074.633 genes 0 gene
1 gene 3 species 0 species
UBERON:000202830130
secondary palatal shelf 1.0061.451 gene 0 gene
3 genes 1 species 0 species
UBERON:000561910310
femur 1.0049.991 gene 0 gene
3 genes 1 species 0 species
UBERON:000098110310
embryonic post-anal tail 1.0065.431 gene 0 gene
3 genes 1 species 0 species
UBERON:000714410310
midbrain 1.0072.951 gene 0 gene
3 genes 1 species 0 species
UBERON:000189110310
cochlea 1.0068.131 gene 0 gene
3 genes 1 species 0 species
UBERON:000184410310
optic fissure 1.0062.551 gene 0 gene
3 genes 1 species 0 species
UBERON:000541210310
ear 1.0062.001 gene 0 gene
3 genes 1 species 0 species
UBERON:000169010310
brain blood vessel 1.0064.421 gene 0 gene
3 genes 1 species 0 species
UBERON:000349910310
gastrula 1.0076.061 gene 0 gene
3 genes 1 species 0 species
UBERON:000473410310
duodenum 0.0064.781 gene 1 gene 2 genes 1 species 1 species UBERON:000211411211
gastrocnemius 1.0069.081 gene 0 gene
3 genes 1 species 0 species
UBERON:000138810310
primitive streak 1.0065.061 gene 0 gene
3 genes 1 species 0 species
UBERON:000434110310
trigeminal ganglion 1.0064.261 gene 0 gene
3 genes 1 species 0 species
UBERON:000167510310
olfactory tubercle -1.0059.720 gene
1 gene 3 genes 0 species
1 species UBERON:000188301301
large intestine 1.0056.402 genes 0 gene
2 genes 2 species 0 species
UBERON:000005920220
dermis 1.0073.231 gene 0 gene
3 genes 1 species 0 species
UBERON:000206710310
islet of Langerhans 1.0063.261 gene 0 gene
3 genes 1 species 0 species
UBERON:000000610310
masseter muscle 1.0068.781 gene 0 gene
3 genes 1 species 0 species
UBERON:000159710310
olfactory bulb 1.0083.711 gene 0 gene
3 genes 1 species 0 species
UBERON:000226410310
membranous labyrinth 1.0057.401 gene 0 gene
3 genes 1 species 0 species
UBERON:000184910310
interventricular septum -1.0062.060 gene
1 gene 3 genes 0 species
1 species UBERON:000209401301
epithelium of cochlear duct 1.0067.141 gene 0 gene
3 genes 1 species 0 species
UBERON:000324310310
prostate gland 1.0063.231 gene 0 gene
3 genes 1 species 0 species
UBERON:000236710310
spleen 1.0069.922 genes 0 gene
2 genes 2 species 0 species
UBERON:000210620220
cerebral hemisphere 1.0066.064 genes 0 gene
0 gene
4 species 0 species
UBERON:000186940040
outflow tract 1.0066.341 gene 0 gene
3 genes 1 species 0 species
UBERON:000414510310
kidney 1.0068.904 genes 0 gene
0 gene
4 species 0 species
UBERON:000211340040
ureter -1.0040.760 gene
1 gene 3 genes 0 species
1 species UBERON:000005601301
quadriceps femoris 1.0069.432 genes 0 gene
2 genes 2 species 0 species
UBERON:000137720220
choroid plexus epithelium 1.0059.401 gene 0 gene
3 genes 1 species 0 species
UBERON:000391110310
right kidney 1.0074.531 gene 0 gene
3 genes 1 species 0 species
UBERON:000453910310
median eminence of neurohypophysis 1.0060.731 gene 0 gene
3 genes 1 species 0 species
UBERON:000219710310
bone marrow 1.0068.401 gene 0 gene
3 genes 1 species 0 species
UBERON:000237110310
1st arch mandibular component 1.0067.731 gene 0 gene
3 genes 1 species 0 species
UBERON:000723710310
brain 1.0070.564 genes 0 gene
0 gene
4 species 0 species
UBERON:000095540040
somite 1.0064.761 gene 0 gene
3 genes 1 species 0 species
UBERON:000232910310
carotid body -1.0052.920 gene
1 gene 3 genes 0 species
1 species UBERON:000162901301
ventral horn of spinal cord 1.0065.081 gene 0 gene
3 genes 1 species 0 species
UBERON:000225710310
lens of camera-type eye 1.0078.141 gene 0 gene
3 genes 1 species 0 species
UBERON:000096510310
multi-cellular organism 1.0064.114 genes 0 gene
0 gene
4 species 0 species
UBERON:000046840040
blood 0.0075.771 gene 1 gene 2 genes 1 species 1 species UBERON:000017811211
esophagus 1.0060.102 genes 0 gene
2 genes 2 species 0 species
UBERON:000104320220
ventricular zone 1.0075.421 gene 0 gene
3 genes 1 species 0 species
UBERON:000305310310
semi-lunar valve 1.0062.281 gene 0 gene
3 genes 1 species 0 species
UBERON:000562310310
triceps brachii -1.0068.100 gene
1 gene 3 genes 0 species
1 species UBERON:000150901301
forebrain 1.0065.554 genes 0 gene
0 gene
4 species 0 species
UBERON:000189040040
skin of external ear 1.0065.861 gene 0 gene
3 genes 1 species 0 species
UBERON:000145910310
brainstem 1.0063.621 gene 0 gene
3 genes 1 species 0 species
UBERON:000229810310
thymus 1.0080.102 genes 0 gene
2 genes 2 species 0 species
UBERON:000237020220
pes 1.0066.021 gene 0 gene
3 genes 1 species 0 species
UBERON:000238710310
epiblast (generic) 1.0074.871 gene 0 gene
3 genes 1 species 0 species
UBERON:000253210310
intestinal epithelium -1.0064.490 gene
1 gene 3 genes 0 species
1 species UBERON:000127701301
sternocleidomastoid -1.0062.470 gene
1 gene 3 genes 0 species
1 species UBERON:000112801301
female gonad 1.0072.404 genes 0 gene
0 gene
4 species 0 species
UBERON:000099240040
intestine 1.0066.612 genes 0 gene
2 genes 2 species 0 species
UBERON:000016020220
embryo 1.0063.002 genes 0 gene
2 genes 2 species 0 species
UBERON:000092220220
epididymis 1.0059.271 gene 0 gene
3 genes 1 species 0 species
UBERON:000130110310
smooth muscle tissue 1.0075.561 gene 0 gene
3 genes 1 species 0 species
UBERON:000113510310
adipose tissue 1.0070.531 gene 0 gene
3 genes 1 species 0 species
UBERON:000101310310
dentate gyrus of hippocampal formation 1.0061.401 gene 0 gene
3 genes 1 species 0 species
UBERON:000188510310
epithelium of lens 1.0060.651 gene 0 gene
3 genes 1 species 0 species
UBERON:000180310310
motor neuron -1.0072.820 gene
1 gene 3 genes 0 species
1 species CL:000010001301
heart 1.0070.144 genes 0 gene
0 gene
4 species 0 species
UBERON:000094840040
jejunum 1.0060.572 genes 0 gene
2 genes 2 species 0 species
UBERON:000211520220
pineal body 1.0059.941 gene 0 gene
3 genes 1 species 0 species
UBERON:000190510310
pons 1.0051.671 gene 0 gene
3 genes 1 species 0 species
UBERON:000098810310
cerebral cortex 1.0061.734 genes 0 gene
0 gene
4 species 0 species
UBERON:000095640040
metanephric ureteric bud 1.0065.491 gene 0 gene
3 genes 1 species 0 species
UBERON:000508010310
gall bladder -1.0049.140 gene
1 gene 3 genes 0 species
1 species UBERON:000211001301
aortic valve 1.0058.911 gene 0 gene
3 genes 1 species 0 species
UBERON:000213710310
renal corpuscle 1.0067.961 gene 0 gene
3 genes 1 species 0 species
UBERON:000122910310
vas deferens 1.0063.491 gene 0 gene
3 genes 1 species 0 species
UBERON:000100010310
epithelium of stomach -1.0059.230 gene
1 gene 3 genes 0 species
1 species UBERON:000127601301
ureter smooth muscle -1.0058.590 gene
1 gene 3 genes 0 species
1 species UBERON:000991901301
atrioventricular valve 1.0063.521 gene 0 gene
3 genes 1 species 0 species
UBERON:000213310310
manus 1.0065.091 gene 0 gene
3 genes 1 species 0 species
UBERON:000239810310
utricle of membranous labyrinth 1.0058.491 gene 0 gene
3 genes 1 species 0 species
UBERON:000185310310
globus pallidus -1.0059.930 gene
1 gene 3 genes 0 species
1 species UBERON:000187501301
Ammon's horn 1.0065.301 gene 0 gene
3 genes 1 species 0 species
UBERON:000195410310
uterus 1.0069.393 genes 0 gene
1 gene 3 species 0 species
UBERON:000099530130
small intestine 1.0056.752 genes 0 gene
2 genes 2 species 0 species
UBERON:000210820220
1st arch maxillary component 1.0069.081 gene 0 gene
3 genes 1 species 0 species
UBERON:000723810310
sciatic nerve -1.0058.070 gene
1 gene 3 genes 0 species
1 species UBERON:000132201301
retina 1.0062.851 gene 0 gene
3 genes 1 species 0 species
UBERON:000096610310
aorta 1.0059.072 genes 0 gene
2 genes 2 species 0 species
UBERON:000094720220
lip 1.0072.781 gene 0 gene
3 genes 1 species 0 species
UBERON:000183310310
striatum 1.0063.701 gene 0 gene
3 genes 1 species 0 species
UBERON:000243510310
epithelium of small intestine -1.0059.540 gene
1 gene 3 genes 0 species
1 species UBERON:000190201301
dorsal root ganglion 1.0083.491 gene 0 gene
3 genes 1 species 0 species
UBERON:000004410310
internal carotid artery -1.0057.090 gene
1 gene 3 genes 0 species
1 species UBERON:000153201301
trachea -1.0046.630 gene
1 gene 3 genes 0 species
1 species UBERON:000312601301
primary visual cortex 1.0074.181 gene 0 gene
3 genes 1 species 0 species
UBERON:000243610310
intercostal muscle 1.0077.381 gene 0 gene
3 genes 1 species 0 species
UBERON:000111110310
adrenal gland 1.0064.582 genes 0 gene
2 genes 2 species 0 species
UBERON:000236920220
pigmented layer of retina 1.0073.001 gene 0 gene
3 genes 1 species 0 species
UBERON:000178210310
lung 1.0061.113 genes 0 gene
1 gene 3 species 0 species
UBERON:000204830130
testis 1.0069.254 genes 0 gene
0 gene
4 species 0 species
UBERON:000047340040
head 1.0062.771 gene 0 gene
3 genes 1 species 0 species
UBERON:000003310310
undifferentiated genital tubercle 1.0069.951 gene 0 gene
3 genes 1 species 0 species
UBERON:000587610310
ileal epithelium -1.0056.730 gene
1 gene 3 genes 0 species
1 species UBERON:000834501301
colon 1.0056.572 genes 0 gene
2 genes 2 species 0 species
UBERON:000115520220
metanephric collecting duct -1.0061.740 gene
1 gene 3 genes 0 species
1 species UBERON:000473701301
presomitic mesoderm 1.0068.851 gene 0 gene
3 genes 1 species 0 species
UBERON:000305910310
submandibular gland -1.0071.940 gene
1 gene 3 genes 0 species
1 species UBERON:000173601301
skeletal muscle tissue 1.0075.543 genes 0 gene
1 gene 3 species 0 species
UBERON:000113430130
male reproductive system 1.0058.784 genes 0 gene
0 gene
4 species 0 species
UBERON:000007940040
hair follicle 1.0066.791 gene 0 gene
3 genes 1 species 0 species
UBERON:000207310310
eyeball of camera-type eye 1.0067.141 gene 0 gene
3 genes 1 species 0 species
UBERON:001023010310
vault of skull -1.0056.860 gene
1 gene 3 genes 0 species
1 species UBERON:000433901301
amygdala 1.0062.671 gene 0 gene
3 genes 1 species 0 species
UBERON:000187610310
skin epidermis 1.0061.441 gene 0 gene
3 genes 1 species 0 species
UBERON:000100310310
ear vesicle 1.0061.001 gene 0 gene
3 genes 1 species 0 species
UBERON:000305110310
ciliary body -1.0064.370 gene
1 gene 3 genes 0 species
1 species UBERON:000177501301
fibroblast 1.0066.451 gene 0 gene
3 genes 1 species 0 species
CL:000005710310
central nervous system 1.0065.724 genes 0 gene
0 gene
4 species 0 species
UBERON:000101740040
metanephric loop of Henle -1.0053.850 gene
1 gene 3 genes 0 species
1 species UBERON:000513001301
heart left ventricle 1.0065.422 genes 0 gene
2 genes 2 species 0 species
UBERON:000208420220
cerebellar cortex 1.0075.631 gene 0 gene
3 genes 1 species 0 species
UBERON:000212910310
blastocyst 1.0055.471 gene 0 gene
3 genes 1 species 0 species
UBERON:000035810310
liver 1.0060.114 genes 0 gene
0 gene
4 species 0 species
UBERON:000210740040
endocardial cushion 1.0065.511 gene 0 gene
3 genes 1 species 0 species
UBERON:000206210310
metanephric mesenchyme 1.0066.071 gene 0 gene
3 genes 1 species 0 species
UBERON:000322010310
saccule of membranous labyrinth 1.0059.881 gene 0 gene
3 genes 1 species 0 species
UBERON:000185410310
parotid gland -1.0051.610 gene
1 gene 3 genes 0 species
1 species UBERON:000183101301
seminal vesicle -1.0067.560 gene
1 gene 3 genes 0 species
1 species UBERON:000099801301
neural tube 1.0072.611 gene 0 gene
3 genes 1 species 0 species
UBERON:000104910310
saliva-secreting gland 1.0068.831 gene 0 gene
3 genes 1 species 0 species
UBERON:000104410310
telencephalon 1.0065.124 genes 0 gene
0 gene
4 species 0 species
UBERON:000189340040
cardiac atrium -1.0057.050 gene
1 gene 3 genes 0 species
1 species UBERON:000208101301
retinal neural layer 1.0078.401 gene 0 gene
3 genes 1 species 0 species
UBERON:000390210310
yolk sac 1.0070.891 gene 0 gene
3 genes 1 species 0 species
UBERON:000104010310
cranial nerve II 1.0060.201 gene 0 gene
3 genes 1 species 0 species
UBERON:000094110310
stomach 1.0066.212 genes 0 gene
2 genes 2 species 0 species
UBERON:000094520220
pituitary gland 1.0070.772 genes 0 gene
2 genes 2 species 0 species
UBERON:000000720220
extra-ocular muscle -1.0058.210 gene
1 gene 3 genes 0 species
1 species UBERON:000160101301
mammary gland 1.0061.141 gene 0 gene
3 genes 1 species 0 species
UBERON:000191110310
metanephros 1.0061.241 gene 0 gene
3 genes 1 species 0 species
UBERON:000008110310
lacrimal gland -1.0065.030 gene
1 gene 3 genes 0 species
1 species UBERON:000181701301

Do not show this banner again