We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 15 genes 0 species
1 species UBERON:0002206011501
chordate pharynx -1.0057.880 gene
1 gene 15 genes 0 species
1 species UBERON:0001042011501
optic fissure -1.0040.620 gene
1 gene 15 genes 0 species
1 species UBERON:0005412011501
postcranial axial skeleton -1.0053.710 gene
1 gene 15 genes 0 species
1 species UBERON:0002090011501
epithelial cell of pancreas -1.0050.540 gene
1 gene 15 genes 0 species
1 species CL:0000083011501
semi-lunar valve -1.0037.770 gene
1 gene 15 genes 0 species
1 species UBERON:0005623011501
brain blood vessel -1.0039.180 gene
1 gene 15 genes 0 species
1 species UBERON:0003499011501
hindlimb, pelvic fin 0.0054.971 gene 1 gene 14 genes 1 species 1 species UBERON:0002103, UBERON:0000152111411
hypothalamus -0.3341.331 gene 2 genes 13 genes 1 species 2 species UBERON:0001898121312
paraxial mesoderm 1.0099.732 genes 0 gene
14 genes 2 species 0 species
UBERON:0003077201420
nervous system 1.0053.687 genes 0 gene
9 genes 7 species 0 species
UBERON:000101670970
gingival epithelium -1.0042.370 gene
1 gene 15 genes 0 species
1 species UBERON:0001949011501
epithelium of hindgut 1.0062.501 gene 0 gene
15 genes 1 species 0 species
UBERON:0003353101510
gastrula 0.3396.712 genes 1 gene 13 genes 2 species 1 species UBERON:0004734211321
otic placode -1.0047.580 gene
1 gene 15 genes 0 species
1 species UBERON:0003069011501
cleaving embryo 0.0047.631 gene 1 gene 14 genes 1 species 1 species UBERON:0007010111411
neuron 1.0073.231 gene 0 gene
15 genes 1 species 0 species
CL:0000540101510
midbrain 0.0041.441 gene 1 gene 14 genes 1 species 1 species UBERON:0001891111411
retinal neural layer -1.0013.600 gene
1 gene 15 genes 0 species
1 species UBERON:0003902011501
cornea -1.0038.570 gene
1 gene 15 genes 0 species
1 species UBERON:0000964011501
hindbrain -1.0013.810 gene
1 gene 15 genes 0 species
1 species UBERON:0002028011501
cranial nerve II -1.0038.760 gene
1 gene 15 genes 0 species
1 species UBERON:0000941011501
stomach -1.0034.160 gene
4 genes 12 genes 0 species
4 species UBERON:0000945041204
pituitary gland -0.3341.741 gene 2 genes 13 genes 1 species 2 species UBERON:0000007121312
inferior vagus X ganglion -1.0041.560 gene
1 gene 15 genes 0 species
1 species UBERON:0005363011501
female reproductive system 1.0041.514 genes 0 gene
12 genes 4 species 0 species
UBERON:0000474401240
epithelium of esophagus -1.0050.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001976011501
pancreas -0.3340.541 gene 2 genes 13 genes 1 species 2 species UBERON:0001264121312
kidney epithelium 0.0048.461 gene 1 gene 14 genes 1 species 1 species UBERON:0004819111411
upper leg skin -1.0035.240 gene
1 gene 15 genes 0 species
1 species UBERON:0004262011501
extra-ocular muscle -1.0051.340 gene
1 gene 15 genes 0 species
1 species UBERON:0001601011501
limb, paired fin 1.0028.042 genes 0 gene
14 genes 2 species 0 species
UBERON:0002101, UBERON:0002534201420
manus, pectoral fin radial bone -1.0045.890 gene
1 gene 15 genes 0 species
1 species UBERON:0002398, UBERON:2001586011501
face -1.0060.700 gene
1 gene 15 genes 0 species
1 species UBERON:0001456011501
blood vessel 1.0058.311 gene 0 gene
15 genes 1 species 0 species
UBERON:0001981101510
putamen -1.0021.880 gene
1 gene 15 genes 0 species
1 species UBERON:0001874011501
telencephalon 0.6047.384 genes 1 gene 11 genes 4 species 1 species UBERON:0001893411141
utricle of membranous labyrinth -1.0038.440 gene
1 gene 15 genes 0 species
1 species UBERON:0001853011501
eyeball of camera-type eye -1.0038.600 gene
1 gene 15 genes 0 species
1 species UBERON:0010230011501
right ovary -1.0014.690 gene
1 gene 15 genes 0 species
1 species UBERON:0002118011501
male reproductive system 1.0035.045 genes 0 gene
11 genes 5 species 0 species
UBERON:0000079501150
testis 0.1136.845 genes 4 genes 7 genes 5 species 4 species UBERON:000047354754
multi-cellular organism 1.0071.729 genes 0 gene
7 genes 9 species 0 species
UBERON:000046890790
ventricular zone -1.0027.720 gene
2 genes 14 genes 0 species
2 species UBERON:0003053021402
neurectoderm 1.0060.701 gene 0 gene
15 genes 1 species 0 species
UBERON:0002346101510
skin epidermis -1.0039.870 gene
1 gene 15 genes 0 species
1 species UBERON:0001003011501
intermediate mesoderm 1.0055.551 gene 0 gene
15 genes 1 species 0 species
UBERON:0003064101510
embryonic post-anal tail 1.0099.141 gene 0 gene
15 genes 1 species 0 species
UBERON:0007144101510
chordal neural plate 1.0049.992 genes 0 gene
14 genes 2 species 0 species
UBERON:0003057201420
peripheral nervous system 0.0059.591 gene 1 gene 14 genes 1 species 1 species UBERON:0000010111411
central nervous system 1.0037.277 genes 0 gene
9 genes 7 species 0 species
UBERON:000101770970
posterior neural tube 1.0070.001 gene 0 gene
15 genes 1 species 0 species
UBERON:0003076101510
fibroblast -1.0027.050 gene
2 genes 14 genes 0 species
2 species CL:0000057021402
mesonephros 0.0054.661 gene 1 gene 14 genes 1 species 1 species UBERON:0000080111411
iris -1.0038.860 gene
1 gene 15 genes 0 species
1 species UBERON:0001769011501
head 0.0039.101 gene 1 gene 14 genes 1 species 1 species UBERON:0000033111411
choroid plexus epithelium -1.0039.040 gene
1 gene 15 genes 0 species
1 species UBERON:0003911011501
trigeminal ganglion -1.0041.590 gene
2 genes 14 genes 0 species
2 species UBERON:0001675021402
forebrain 0.6042.624 genes 1 gene 11 genes 4 species 1 species UBERON:0001890411141
caecum -1.0041.140 gene
2 genes 14 genes 0 species
2 species UBERON:0001153021402
olfactory bulb -1.0050.000 gene
2 genes 14 genes 0 species
2 species UBERON:0002264021402
heart left ventricle, primary heart field -1.0046.340 gene
3 genes 13 genes 0 species
3 species UBERON:0002084, UBERON:0004140031303
diencephalon 1.0072.341 gene 0 gene
15 genes 1 species 0 species
UBERON:0001894101510
lens of camera-type eye -1.0029.300 gene
1 gene 15 genes 0 species
1 species UBERON:0000965011501
ear -1.0045.390 gene
1 gene 15 genes 0 species
1 species UBERON:0001690011501
brain 0.5039.306 genes 2 genes 8 genes 6 species 2 species UBERON:000095562862
collection of basal ganglia -1.0055.540 gene
1 gene 15 genes 0 species
1 species UBERON:0010011011501
male germ cell -1.0049.300 gene
1 gene 15 genes 0 species
1 species CL:0000015011501
future brain -1.0054.330 gene
1 gene 15 genes 0 species
1 species UBERON:0006238011501
upper arm skin -1.0049.030 gene
1 gene 15 genes 0 species
1 species UBERON:0004263011501
smooth muscle tissue -1.0024.250 gene
1 gene 15 genes 0 species
1 species UBERON:0001135011501
axial mesoderm -1.0052.750 gene
1 gene 15 genes 0 species
1 species UBERON:0003068011501
heart right ventricle -1.0045.490 gene
2 genes 14 genes 0 species
2 species UBERON:0002080021402
lip -1.0012.270 gene
1 gene 15 genes 0 species
1 species UBERON:0001833011501
gonad 1.0061.526 genes 0 gene
10 genes 6 species 0 species
UBERON:0000991601060
skin of hip -1.0036.940 gene
1 gene 15 genes 0 species
1 species UBERON:0001554011501
female gonad 0.0060.923 genes 3 genes 10 genes 3 species 3 species UBERON:0000992331033
internal ear -1.0084.490 gene
1 gene 15 genes 0 species
1 species UBERON:0001846011501
ileum 0.0036.772 genes 2 genes 12 genes 2 species 2 species UBERON:0002116221222
olfactory lobe -1.0057.980 gene
1 gene 15 genes 0 species
1 species UBERON:0005366011501
cartilage tissue -1.0043.960 gene
1 gene 15 genes 0 species
1 species UBERON:0002418011501
blastopore, primitive streak 1.0076.771 gene 0 gene
15 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101510
thyroid gland -1.0076.180 gene
2 genes 14 genes 0 species
2 species UBERON:0002046021402
adenohypophysis -1.0028.500 gene
1 gene 15 genes 0 species
1 species UBERON:0002196011501
midbrain tegmentum 1.0060.851 gene 0 gene
15 genes 1 species 0 species
UBERON:0001943101510
choroid plexus of fourth ventricle -1.0044.250 gene
1 gene 15 genes 0 species
1 species UBERON:0002290011501
larva 1.0039.171 gene 0 gene
15 genes 1 species 0 species
UBERON:0002548101510
bone element 0.0041.611 gene 1 gene 14 genes 1 species 1 species UBERON:0001474111411
spinal cord neural plate 1.0050.001 gene 0 gene
15 genes 1 species 0 species
UBERON:0003854101510
cerebellum -1.0040.390 gene
7 genes 9 genes 0 species
7 species UBERON:000203707907
fundus of stomach -1.0025.900 gene
1 gene 15 genes 0 species
1 species UBERON:0001160011501
pineal body -1.0040.470 gene
1 gene 15 genes 0 species
1 species UBERON:0001905011501
dermis -1.0038.570 gene
1 gene 15 genes 0 species
1 species UBERON:0002067011501
cardiac ventricle -1.0046.970 gene
3 genes 13 genes 0 species
3 species UBERON:0002082031303
outflow tract -1.0030.560 gene
1 gene 15 genes 0 species
1 species UBERON:0004145011501
saccule of membranous labyrinth -1.0047.220 gene
1 gene 15 genes 0 species
1 species UBERON:0001854011501
ectoderm 1.0062.821 gene 0 gene
15 genes 1 species 0 species
UBERON:0000924101510
caudal tuberculum, substantia nigra -1.0040.070 gene
2 genes 14 genes 0 species
2 species UBERON:2000633, UBERON:0002038021402
camera-type eye -1.0039.310 gene
1 gene 15 genes 0 species
1 species UBERON:0000019011501
choroid plexus -1.0058.100 gene
1 gene 15 genes 0 species
1 species UBERON:0001886011501
thymus -1.0049.120 gene
3 genes 13 genes 0 species
3 species UBERON:0002370031303
forelimb, pectoral fin -1.0070.820 gene
1 gene 15 genes 0 species
1 species UBERON:0002102, UBERON:0000151011501
tendon -1.0041.880 gene
1 gene 15 genes 0 species
1 species UBERON:0000043011501
digestive tract 1.0053.133 genes 0 gene
13 genes 3 species 0 species
UBERON:0001555301330
motor neuron -1.0042.030 gene
1 gene 15 genes 0 species
1 species CL:0000100011501
olfactory cortex -1.0056.240 gene
1 gene 15 genes 0 species
1 species UBERON:0002894011501
epithelium of lens -1.0039.680 gene
1 gene 15 genes 0 species
1 species UBERON:0001803011501
internal carotid artery -1.0040.890 gene
1 gene 15 genes 0 species
1 species UBERON:0001532011501
1st arch mandibular component -1.0041.150 gene
1 gene 15 genes 0 species
1 species UBERON:0007237011501
neural plate 1.0068.592 genes 0 gene
14 genes 2 species 0 species
UBERON:0003075201420
endocardial endothelium -1.0016.620 gene
1 gene 15 genes 0 species
1 species UBERON:0005316011501
calcareous tooth -1.0063.140 gene
1 gene 15 genes 0 species
1 species UBERON:0001091011501
Ammon's horn -0.3338.061 gene 2 genes 13 genes 1 species 2 species UBERON:0001954121312
epiblast (generic) 1.0037.912 genes 0 gene
14 genes 2 species 0 species
UBERON:0002532201420
adrenal cortex -1.0041.810 gene
1 gene 15 genes 0 species
1 species UBERON:0001235011501
sternocleidomastoid -1.0036.950 gene
1 gene 15 genes 0 species
1 species UBERON:0001128011501
brainstem -0.3338.791 gene 2 genes 13 genes 1 species 2 species UBERON:0002298121312
aorta -1.0041.770 gene
2 genes 14 genes 0 species
2 species UBERON:0000947021402
right kidney 1.0058.951 gene 0 gene
15 genes 1 species 0 species
UBERON:0004539101510
retina -1.0044.400 gene
2 genes 14 genes 0 species
2 species UBERON:0000966021402
somite 0.0096.861 gene 1 gene 14 genes 1 species 1 species UBERON:0002329111411
intestine 0.5089.013 genes 1 gene 12 genes 3 species 1 species UBERON:0000160311231
esophagus -1.0025.730 gene
3 genes 13 genes 0 species
3 species UBERON:0001043031303
myocardium -1.0043.250 gene
1 gene 15 genes 0 species
1 species UBERON:0002349011501
blastula 1.0042.173 genes 0 gene
13 genes 3 species 0 species
UBERON:0000307301330
right testis -1.0028.420 gene
1 gene 15 genes 0 species
1 species UBERON:0004534011501
blood -1.0040.940 gene
4 genes 12 genes 0 species
4 species UBERON:0000178041204
adipose tissue 0.0041.332 genes 2 genes 12 genes 2 species 2 species UBERON:0001013221222
kidney blood vessel -1.0066.660 gene
1 gene 15 genes 0 species
1 species UBERON:0003517011501
skeletal muscle tissue -1.0049.380 gene
6 genes 10 genes 0 species
6 species UBERON:0001134061006
integumental system 0.3355.142 genes 1 gene 13 genes 2 species 1 species UBERON:0002416211321
cardiovascular system 1.0055.142 genes 0 gene
14 genes 2 species 0 species
UBERON:0004535201420
hypochord 1.0088.081 gene 0 gene
15 genes 1 species 0 species
UBERON:0003058101510
spleen -0.6736.101 gene 5 genes 10 genes 1 species 5 species UBERON:0002106151015
kidney 0.0048.583 genes 3 genes 10 genes 3 species 3 species UBERON:0002113331033
intestinal epithelium -1.0041.670 gene
1 gene 15 genes 0 species
1 species UBERON:0001277011501
hindgut 1.0059.591 gene 0 gene
15 genes 1 species 0 species
UBERON:0001046101510
pericardium -1.0041.830 gene
1 gene 15 genes 0 species
1 species UBERON:0002407011501
endoderm 1.0086.661 gene 0 gene
15 genes 1 species 0 species
UBERON:0000925101510
lung, swim bladder -0.3339.582 genes 4 genes 10 genes 2 species 4 species UBERON:0002048, UBERON:0006860241024
cardiac atrium -1.0041.810 gene
2 genes 14 genes 0 species
2 species UBERON:0002081021402
ventral horn of spinal cord -1.0038.710 gene
1 gene 15 genes 0 species
1 species UBERON:0002257011501
islet of Langerhans 0.0043.801 gene 1 gene 14 genes 1 species 1 species UBERON:0000006111411
neural tube 1.0086.643 genes 0 gene
13 genes 3 species 0 species
UBERON:0001049301330
pleura -1.0043.380 gene
1 gene 15 genes 0 species
1 species UBERON:0000977011501
endocardial cushion -1.0039.650 gene
1 gene 15 genes 0 species
1 species UBERON:0002062011501
cerebral hemisphere 1.0038.934 genes 0 gene
12 genes 4 species 0 species
UBERON:0001869401240
appendicular skeleton -1.0063.630 gene
1 gene 15 genes 0 species
1 species UBERON:0002091011501
pigmented layer of retina -1.0040.590 gene
2 genes 14 genes 0 species
2 species UBERON:0001782021402
1st arch maxillary component -1.0041.060 gene
1 gene 15 genes 0 species
1 species UBERON:0007238011501
cerebellar cortex -1.0020.650 gene
3 genes 13 genes 0 species
3 species UBERON:0002129031303
cranial ganglion -1.0065.370 gene
1 gene 15 genes 0 species
1 species UBERON:0001714011501
heart -0.7533.351 gene 7 genes 8 genes 1 species 7 species UBERON:000094817817
liver -0.3342.003 genes 6 genes 7 genes 3 species 6 species UBERON:000210736736
cranium -1.0053.530 gene
1 gene 15 genes 0 species
1 species UBERON:0003128011501
ileal epithelium -1.0043.800 gene
1 gene 15 genes 0 species
1 species UBERON:0008345011501
colon -0.6031.301 gene 4 genes 11 genes 1 species 4 species UBERON:0001155141114
left testis -1.0026.100 gene
1 gene 15 genes 0 species
1 species UBERON:0004533011501
muscle organ -0.3348.401 gene 2 genes 13 genes 1 species 2 species UBERON:0001630121312
striatum -1.0038.200 gene
1 gene 15 genes 0 species
1 species UBERON:0002435011501
myocardium of ventricle -1.0039.700 gene
1 gene 15 genes 0 species
1 species UBERON:0001083011501
presomitic mesoderm 1.0099.492 genes 0 gene
14 genes 2 species 0 species
UBERON:0003059201420
olfactory epithelium -1.0043.800 gene
1 gene 15 genes 0 species
1 species UBERON:0001997011501
meninx -1.0063.140 gene
1 gene 15 genes 0 species
1 species UBERON:0002360011501
dorsal root ganglion 0.0042.691 gene 1 gene 14 genes 1 species 1 species UBERON:0000044111411
aortic valve -1.0042.310 gene
1 gene 15 genes 0 species
1 species UBERON:0002137011501
ciliary body -1.0037.490 gene
1 gene 15 genes 0 species
1 species UBERON:0001775011501
ear vesicle -1.0045.560 gene
1 gene 15 genes 0 species
1 species UBERON:0003051011501
musculature 0.0065.381 gene 1 gene 14 genes 1 species 1 species UBERON:0001015111411
gall bladder -1.0021.990 gene
1 gene 15 genes 0 species
1 species UBERON:0002110011501
atrioventricular valve -1.0039.640 gene
1 gene 15 genes 0 species
1 species UBERON:0002133011501
parathyroid gland, pharyngeal gill -1.0011.400 gene
1 gene 15 genes 0 species
1 species UBERON:0001132, UBERON:0000206011501
renal system 1.0075.323 genes 0 gene
13 genes 3 species 0 species
UBERON:0001008301330
gingiva -1.0039.270 gene
1 gene 15 genes 0 species
1 species UBERON:0001828011501
mesoderm 1.0073.541 gene 0 gene
15 genes 1 species 0 species
UBERON:0000926101510
peritoneum -1.0041.410 gene
1 gene 15 genes 0 species
1 species UBERON:0002358011501
zygote -1.0046.050 gene
1 gene 15 genes 0 species
1 species CL:0000365011501
post-anal tail bud 1.0096.292 genes 0 gene
14 genes 2 species 0 species
UBERON:0002533201420
respiratory system 1.0055.532 genes 0 gene
14 genes 2 species 0 species
UBERON:0001004201420
medulla oblongata -1.0043.900 gene
3 genes 13 genes 0 species
3 species UBERON:0001896031303
pylorus -1.0041.490 gene
1 gene 15 genes 0 species
1 species UBERON:0001166011501
caudate nucleus -1.0020.390 gene
1 gene 15 genes 0 species
1 species UBERON:0001873011501
embryo 0.6764.155 genes 1 gene 10 genes 5 species 1 species UBERON:0000922511051
left ovary -1.0015.180 gene
1 gene 15 genes 0 species
1 species UBERON:0002119011501
rhombomere -1.0054.510 gene
1 gene 15 genes 0 species
1 species UBERON:0001892011501
presumptive mesoderm 1.0049.991 gene 0 gene
15 genes 1 species 0 species
UBERON:0006603101510

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