We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0056.780 gene
1 gene 8 genes 0 species
1 species UBERON:000220601801
optic fissure -1.0060.070 gene
1 gene 8 genes 0 species
1 species UBERON:000541201801
chordate pharynx -1.0057.880 gene
1 gene 8 genes 0 species
1 species UBERON:000104201801
postcranial axial skeleton -1.0053.710 gene
1 gene 8 genes 0 species
1 species UBERON:000209001801
semi-lunar valve 1.0068.081 gene 0 gene
8 genes 1 species 0 species
UBERON:000562310810
brain blood vessel 1.0050.271 gene 0 gene
8 genes 1 species 0 species
UBERON:000349910810
hindlimb, pelvic fin 1.0054.974 genes 0 gene
5 genes 4 species 0 species
UBERON:0002103, UBERON:000015240540
hypothalamus 0.5076.293 genes 1 gene 5 genes 3 species 1 species UBERON:000189831531
paraxial mesoderm -1.0051.220 gene
1 gene 8 genes 0 species
1 species UBERON:000307701801
nervous system 1.0053.689 genes 0 gene
0 gene
9 species 0 species
UBERON:000101690090
gastrula 0.0042.711 gene 1 gene 7 genes 1 species 1 species UBERON:000473411711
otic placode -1.0047.580 gene
1 gene 8 genes 0 species
1 species UBERON:000306901801
cleaving embryo 0.0059.191 gene 1 gene 7 genes 1 species 1 species UBERON:000701011711
retinal neural layer 1.0064.851 gene 0 gene
8 genes 1 species 0 species
UBERON:000390210810
midbrain 1.0025.101 gene 0 gene
8 genes 1 species 0 species
UBERON:000189110810
cornea 1.0073.061 gene 0 gene
8 genes 1 species 0 species
UBERON:000096410810
hindbrain 1.0049.656 genes 0 gene
3 genes 6 species 0 species
UBERON:000202860360
cranial nerve II 1.0055.931 gene 0 gene
8 genes 1 species 0 species
UBERON:000094110810
stomach 0.6068.854 genes 1 gene 4 genes 4 species 1 species UBERON:000094541441
pituitary gland 0.0074.612 genes 2 genes 5 genes 2 species 2 species UBERON:000000722522
pancreas 1.0078.023 genes 0 gene
6 genes 3 species 0 species
UBERON:000126430630
extra-ocular muscle 1.0097.831 gene 0 gene
8 genes 1 species 0 species
UBERON:000160110810
limb, paired fin 1.0074.694 genes 0 gene
5 genes 4 species 0 species
UBERON:0002101, UBERON:000253440540
manus, pectoral fin radial bone -1.0058.020 gene
1 gene 8 genes 0 species
1 species UBERON:0002398, UBERON:200158601801
face 1.0060.705 genes 0 gene
4 genes 5 species 0 species
UBERON:000145650450
blood vessel 1.0058.314 genes 0 gene
5 genes 4 species 0 species
UBERON:000198140540
telencephalon 1.0059.227 genes 0 gene
2 genes 7 species 0 species
UBERON:000189370270
utricle of membranous labyrinth 1.0053.581 gene 0 gene
8 genes 1 species 0 species
UBERON:000185310810
eyeball of camera-type eye 1.0099.095 genes 0 gene
4 genes 5 species 0 species
UBERON:001023050450
male reproductive system 1.0031.358 genes 0 gene
1 gene 8 species 0 species
UBERON:000007980180
testis 0.7898.408 genes 1 gene 0 gene
8 species 1 species UBERON:000047381081
autopod skin -1.007.220 gene
1 gene 8 genes 0 species
1 species UBERON:001579001801
multi-cellular organism 1.0092.529 genes 0 gene
0 gene
9 species 0 species
UBERON:000046890090
ventricular zone -1.0022.700 gene
1 gene 8 genes 0 species
1 species UBERON:000305301801
skin epidermis 1.0073.631 gene 0 gene
8 genes 1 species 0 species
UBERON:000100310810
embryonic post-anal tail -1.0018.030 gene
1 gene 8 genes 0 species
1 species UBERON:000714401801
peripheral nervous system 1.0059.591 gene 0 gene
8 genes 1 species 0 species
UBERON:000001010810
central nervous system 1.0051.109 genes 0 gene
0 gene
9 species 0 species
UBERON:000101790090
fibroblast -1.0045.300 gene
1 gene 8 genes 0 species
1 species CL:000005701801
iris 1.0077.641 gene 0 gene
8 genes 1 species 0 species
UBERON:000176910810
head 1.0074.595 genes 0 gene
4 genes 5 species 0 species
UBERON:000003350450
choroid plexus epithelium 1.0075.981 gene 0 gene
8 genes 1 species 0 species
UBERON:000391110810
tongue muscle 1.0098.651 gene 0 gene
8 genes 1 species 0 species
UBERON:000037810810
trigeminal ganglion -1.0044.600 gene
1 gene 8 genes 0 species
1 species UBERON:000167501801
forebrain 1.0038.867 genes 0 gene
2 genes 7 species 0 species
UBERON:000189070270
vertebral column -1.0046.040 gene
1 gene 8 genes 0 species
1 species UBERON:000113001801
caecum 0.0095.501 gene 1 gene 7 genes 1 species 1 species UBERON:000115311711
heart left ventricle, primary heart field 1.0099.793 genes 0 gene
6 genes 3 species 0 species
UBERON:0002084, UBERON:000414030630
olfactory bulb 1.0057.152 genes 0 gene
7 genes 2 species 0 species
UBERON:000226420720
diencephalon 1.0072.343 genes 0 gene
6 genes 3 species 0 species
UBERON:000189430630
lens of camera-type eye 1.0039.431 gene 0 gene
8 genes 1 species 0 species
UBERON:000096510810
ear 1.0068.112 genes 0 gene
7 genes 2 species 0 species
UBERON:000169020720
brain 1.0087.619 genes 0 gene
0 gene
9 species 0 species
UBERON:000095590090
collection of basal ganglia 1.0055.542 genes 0 gene
7 genes 2 species 0 species
UBERON:001001120720
smooth muscle tissue 1.0099.703 genes 0 gene
6 genes 3 species 0 species
UBERON:000113530630
heart right ventricle 1.0099.892 genes 0 gene
7 genes 2 species 0 species
UBERON:000208020720
lip 1.0099.331 gene 0 gene
8 genes 1 species 0 species
UBERON:000183310810
gonad 1.0061.529 genes 0 gene
0 gene
9 species 0 species
UBERON:000099190090
female gonad 1.0088.188 genes 0 gene
1 gene 8 species 0 species
UBERON:000099280180
internal ear 1.0084.491 gene 0 gene
8 genes 1 species 0 species
UBERON:000184610810
ileum 0.5087.753 genes 1 gene 5 genes 3 species 1 species UBERON:000211631531
mitral valve 1.0099.681 gene 0 gene
8 genes 1 species 0 species
UBERON:000213510810
cartilage tissue -1.008.620 gene
1 gene 8 genes 0 species
1 species UBERON:000241801801
blastopore, primitive streak -1.0056.200 gene
1 gene 8 genes 0 species
1 species UBERON:0000100, UBERON:000434101801
thyroid gland -0.3376.181 gene 2 genes 6 genes 1 species 2 species UBERON:000204612612
adenohypophysis 1.0076.011 gene 0 gene
8 genes 1 species 0 species
UBERON:000219610810
midbrain tegmentum 1.0060.851 gene 0 gene
8 genes 1 species 0 species
UBERON:000194310810
choroid plexus of fourth ventricle 1.0088.321 gene 0 gene
8 genes 1 species 0 species
UBERON:000229010810
larva 1.0077.181 gene 0 gene
8 genes 1 species 0 species
UBERON:000254810810
bone element 1.0082.214 genes 0 gene
5 genes 4 species 0 species
UBERON:000147440540
cerebellum 1.0071.806 genes 0 gene
3 genes 6 species 0 species
UBERON:000203760360
pineal body 1.0061.351 gene 0 gene
8 genes 1 species 0 species
UBERON:000190510810
dermis 1.0061.181 gene 0 gene
8 genes 1 species 0 species
UBERON:000206710810
cardiac ventricle 1.0099.544 genes 0 gene
5 genes 4 species 0 species
UBERON:000208240540
outflow tract 1.0038.072 genes 0 gene
7 genes 2 species 0 species
UBERON:000414520720
saccule of membranous labyrinth 1.0047.221 gene 0 gene
8 genes 1 species 0 species
UBERON:000185410810
camera-type eye 1.0094.365 genes 0 gene
4 genes 5 species 0 species
UBERON:000001950450
caudal tuberculum, substantia nigra -1.0042.180 gene
1 gene 8 genes 0 species
1 species UBERON:2000633, UBERON:000203801801
choroid plexus 1.0098.342 genes 0 gene
7 genes 2 species 0 species
UBERON:000188620720
thymus 0.3386.182 genes 1 gene 6 genes 2 species 1 species UBERON:000237021621
forelimb, pectoral fin 1.0070.822 genes 0 gene
7 genes 2 species 0 species
UBERON:0002102, UBERON:000015120720
motor neuron -1.0056.500 gene
1 gene 8 genes 0 species
1 species CL:000010001801
olfactory cortex -1.0056.240 gene
1 gene 8 genes 0 species
1 species UBERON:000289401801
epithelium of lens 1.0065.461 gene 0 gene
8 genes 1 species 0 species
UBERON:000180310810
right cardiac atrium 1.0099.781 gene 0 gene
8 genes 1 species 0 species
UBERON:000207810810
internal carotid artery 1.0067.921 gene 0 gene
8 genes 1 species 0 species
UBERON:000153210810
1st arch mandibular component 1.0057.311 gene 0 gene
8 genes 1 species 0 species
UBERON:000723710810
endocardial endothelium 1.0082.051 gene 0 gene
8 genes 1 species 0 species
UBERON:000531610810
calcareous tooth 1.0063.141 gene 0 gene
8 genes 1 species 0 species
UBERON:000109110810
Ammon's horn 1.0082.583 genes 0 gene
6 genes 3 species 0 species
UBERON:000195430630
epiblast (generic) -1.0029.110 gene
1 gene 8 genes 0 species
1 species UBERON:000253201801
adrenal cortex -1.006.010 gene
1 gene 8 genes 0 species
1 species UBERON:000123501801
sternocleidomastoid 1.0099.791 gene 0 gene
8 genes 1 species 0 species
UBERON:000112810810
brainstem 1.0059.403 genes 0 gene
6 genes 3 species 0 species
UBERON:000229830630
aorta 1.0098.623 genes 0 gene
6 genes 3 species 0 species
UBERON:000094730630
right kidney 1.0050.481 gene 0 gene
8 genes 1 species 0 species
UBERON:000453910810
retina 1.0086.524 genes 0 gene
5 genes 4 species 0 species
UBERON:000096640540
somite -1.0058.120 gene
2 genes 7 genes 0 species
2 species UBERON:000232902702
intestine 1.0098.816 genes 0 gene
3 genes 6 species 0 species
UBERON:000016060360
esophagus 1.0099.373 genes 0 gene
6 genes 3 species 0 species
UBERON:000104330630
blastula 1.0042.062 genes 0 gene
7 genes 2 species 0 species
UBERON:000030720720
blood 1.0091.786 genes 0 gene
3 genes 6 species 0 species
UBERON:000017860360
adipose tissue 0.5086.863 genes 1 gene 5 genes 3 species 1 species UBERON:000101331531
embryonic head 1.0076.832 genes 0 gene
7 genes 2 species 0 species
UBERON:000881620720
skeletal muscle tissue 1.0099.807 genes 0 gene
2 genes 7 species 0 species
UBERON:000113470270
integumental system 1.0055.147 genes 0 gene
2 genes 7 species 0 species
UBERON:000241670270
cardiovascular system 1.0055.148 genes 0 gene
1 gene 8 species 0 species
UBERON:000453580180
spleen 0.7597.567 genes 1 gene 1 gene 7 species 1 species UBERON:000210671171
kidney 1.0098.899 genes 0 gene
0 gene
9 species 0 species
UBERON:000211390090
intestinal epithelium -1.0059.080 gene
1 gene 8 genes 0 species
1 species UBERON:000127701801
lung, swim bladder 1.0093.798 genes 0 gene
1 gene 8 species 0 species
UBERON:0002048, UBERON:000686080180
cardiac atrium 1.0098.213 genes 0 gene
6 genes 3 species 0 species
UBERON:000208130630
ventral horn of spinal cord 1.0061.481 gene 0 gene
8 genes 1 species 0 species
UBERON:000225710810
islet of Langerhans 1.0052.381 gene 0 gene
8 genes 1 species 0 species
UBERON:000000610810
neural tube 1.0066.842 genes 0 gene
7 genes 2 species 0 species
UBERON:000104920720
endocardial cushion 1.0076.081 gene 0 gene
8 genes 1 species 0 species
UBERON:000206210810
cerebral hemisphere 1.0059.257 genes 0 gene
2 genes 7 species 0 species
UBERON:000186970270
appendicular skeleton 1.0063.631 gene 0 gene
8 genes 1 species 0 species
UBERON:000209110810
pigmented layer of retina 1.0076.161 gene 0 gene
8 genes 1 species 0 species
UBERON:000178210810
1st arch maxillary component 1.0058.311 gene 0 gene
8 genes 1 species 0 species
UBERON:000723810810
cerebellar cortex 1.0070.741 gene 0 gene
8 genes 1 species 0 species
UBERON:000212910810
cranial ganglion -1.0069.210 gene
1 gene 8 genes 0 species
1 species UBERON:000171401801
heart 1.0099.878 genes 0 gene
1 gene 8 species 0 species
UBERON:000094880180
liver 1.0098.159 genes 0 gene
0 gene
9 species 0 species
UBERON:000210790090
cranium 1.0053.531 gene 0 gene
8 genes 1 species 0 species
UBERON:000312810810
ileal epithelium -1.0072.680 gene
1 gene 8 genes 0 species
1 species UBERON:000834501801
colon 0.6788.555 genes 1 gene 3 genes 5 species 1 species UBERON:000115551351
muscle organ 1.0099.178 genes 0 gene
1 gene 8 species 0 species
UBERON:000163080180
striatum 1.0061.781 gene 0 gene
8 genes 1 species 0 species
UBERON:000243510810
myocardium of ventricle 1.0099.842 genes 0 gene
7 genes 2 species 0 species
UBERON:000108320720
neurohypophysis 1.0074.981 gene 0 gene
8 genes 1 species 0 species
UBERON:000219810810
presomitic mesoderm -1.0059.250 gene
2 genes 7 genes 0 species
2 species UBERON:000305902702
olfactory epithelium 1.0088.611 gene 0 gene
8 genes 1 species 0 species
UBERON:000199710810
meninx -1.0063.140 gene
1 gene 8 genes 0 species
1 species UBERON:000236001801
dorsal root ganglion 1.0059.311 gene 0 gene
8 genes 1 species 0 species
UBERON:000004410810
aortic valve 1.0096.221 gene 0 gene
8 genes 1 species 0 species
UBERON:000213710810
ciliary body 1.0080.261 gene 0 gene
8 genes 1 species 0 species
UBERON:000177510810
ear vesicle 1.0048.391 gene 0 gene
8 genes 1 species 0 species
UBERON:000305110810
musculature 1.0065.388 genes 0 gene
1 gene 8 species 0 species
UBERON:000101580180
atrioventricular valve 1.0096.002 genes 0 gene
7 genes 2 species 0 species
UBERON:000213320720
gall bladder 1.0082.321 gene 0 gene
8 genes 1 species 0 species
UBERON:000211010810
parathyroid gland, pharyngeal gill 1.0098.021 gene 0 gene
8 genes 1 species 0 species
UBERON:0001132, UBERON:000020610810
renal system 1.0075.328 genes 0 gene
1 gene 8 species 0 species
UBERON:000100880180
zygote 1.0052.001 gene 0 gene
8 genes 1 species 0 species
CL:000036510810
respiratory system 1.0055.538 genes 0 gene
1 gene 8 species 0 species
UBERON:000100480180
medulla oblongata 1.0070.082 genes 0 gene
7 genes 2 species 0 species
UBERON:000189620720
embryo 1.0062.026 genes 0 gene
3 genes 6 species 0 species
UBERON:000092260360

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