We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0075.891 gene 0 gene
15 genes 1 species 0 species
UBERON:0002206101510
optic fissure -1.0064.080 gene
1 gene 15 genes 0 species
1 species UBERON:0005412011501
epithelial cell of pancreas 1.0062.481 gene 0 gene
15 genes 1 species 0 species
CL:0000083101510
semi-lunar valve 1.0067.201 gene 0 gene
15 genes 1 species 0 species
UBERON:0005623101510
inferior olivary complex 1.0062.541 gene 0 gene
15 genes 1 species 0 species
UBERON:0002127101510
brain blood vessel 1.0059.581 gene 0 gene
15 genes 1 species 0 species
UBERON:0003499101510
hypothalamus 1.0079.076 genes 0 gene
10 genes 6 species 0 species
UBERON:0001898601060
gingival epithelium -1.0064.520 gene
1 gene 15 genes 0 species
1 species UBERON:0001949011501
gastrula -1.0060.600 gene
2 genes 14 genes 0 species
2 species UBERON:0004734021402
otic placode -1.0047.580 gene
1 gene 15 genes 0 species
1 species UBERON:0003069011501
cleaving embryo -1.0055.620 gene
1 gene 15 genes 0 species
1 species UBERON:0007010011501
midbrain 1.0079.832 genes 0 gene
14 genes 2 species 0 species
UBERON:0001891201420
retinal neural layer 1.0079.851 gene 0 gene
15 genes 1 species 0 species
UBERON:0003902101510
cornea 1.0055.201 gene 0 gene
15 genes 1 species 0 species
UBERON:0000964101510
hindbrain 1.0068.7411 genes 0 gene
5 genes 11 species 0 species
UBERON:00020281105110
cranial nerve II -1.0054.580 gene
2 genes 14 genes 0 species
2 species UBERON:0000941021402
stomach 0.6774.085 genes 1 gene 10 genes 5 species 1 species UBERON:0000945511051
pituitary gland 1.0077.716 genes 0 gene
10 genes 6 species 0 species
UBERON:0000007601060
inferior vagus X ganglion 1.0061.311 gene 0 gene
15 genes 1 species 0 species
UBERON:0005363101510
female reproductive system 1.0060.2211 genes 0 gene
5 genes 11 species 0 species
UBERON:00004741105110
epithelium of esophagus 1.0053.921 gene 0 gene
15 genes 1 species 0 species
UBERON:0001976101510
pancreas 1.0078.824 genes 0 gene
12 genes 4 species 0 species
UBERON:0001264401240
kidney epithelium 0.0066.571 gene 1 gene 14 genes 1 species 1 species UBERON:0004819111411
upper leg skin -1.0059.260 gene
1 gene 15 genes 0 species
1 species UBERON:0004262011501
extra-ocular muscle 1.0059.061 gene 0 gene
15 genes 1 species 0 species
UBERON:0001601101510
limb, paired fin 1.0056.556 genes 0 gene
10 genes 6 species 0 species
UBERON:0002101, UBERON:0002534601060
manus, pectoral fin radial bone -1.0055.190 gene
1 gene 15 genes 0 species
1 species UBERON:0002398, UBERON:2001586011501
putamen 1.0065.161 gene 0 gene
15 genes 1 species 0 species
UBERON:0001874101510
telencephalon 1.0068.0412 genes 0 gene
4 genes 12 species 0 species
UBERON:00018931204120
utricle of membranous labyrinth -1.0053.480 gene
1 gene 15 genes 0 species
1 species UBERON:0001853011501
eyeball of camera-type eye 1.0064.745 genes 0 gene
11 genes 5 species 0 species
UBERON:0010230501150
right ovary 1.0067.771 gene 0 gene
15 genes 1 species 0 species
UBERON:0002118101510
testis 0.4770.7311 genes 4 genes 1 gene 11 species 4 species UBERON:00004731141114
male reproductive system 1.0073.8012 genes 0 gene
4 genes 12 species 0 species
UBERON:00000791204120
autopod skin -1.0028.240 gene
1 gene 15 genes 0 species
1 species UBERON:0015790011501
multi-cellular organism 1.0065.9616 genes 0 gene
0 gene
16 species 0 species
UBERON:00004681600160
ventricular zone 1.0055.772 genes 0 gene
14 genes 2 species 0 species
UBERON:0003053201420
skin epidermis 1.0058.952 genes 0 gene
14 genes 2 species 0 species
UBERON:0001003201420
embryonic post-anal tail -1.0033.410 gene
2 genes 14 genes 0 species
2 species UBERON:0007144021402
central nervous system 1.0081.4316 genes 0 gene
0 gene
16 species 0 species
UBERON:00010171600160
fibroblast 0.3353.802 genes 1 gene 13 genes 2 species 1 species CL:0000057211321
iris 1.0062.551 gene 0 gene
15 genes 1 species 0 species
UBERON:0001769101510
head 1.0057.597 genes 0 gene
9 genes 7 species 0 species
UBERON:000003370970
choroid plexus epithelium 1.0061.442 genes 0 gene
14 genes 2 species 0 species
UBERON:0003911201420
tongue muscle -1.0032.300 gene
1 gene 15 genes 0 species
1 species UBERON:0000378011501
trigeminal ganglion 1.0069.182 genes 0 gene
14 genes 2 species 0 species
UBERON:0001675201420
forebrain 1.0065.9712 genes 0 gene
4 genes 12 species 0 species
UBERON:00018901204120
vertebral column -1.0046.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001130011501
caecum 0.3370.662 genes 1 gene 13 genes 2 species 1 species UBERON:0001153211321
heart left ventricle, primary heart field 0.6084.854 genes 1 gene 11 genes 4 species 1 species UBERON:0002084, UBERON:0004140411141
olfactory bulb 0.3373.952 genes 1 gene 13 genes 2 species 1 species UBERON:0002264211321
lens of camera-type eye 1.0058.251 gene 0 gene
15 genes 1 species 0 species
UBERON:0000965101510
ear 1.0053.092 genes 0 gene
14 genes 2 species 0 species
UBERON:0001690201420
brain 1.0070.2116 genes 0 gene
0 gene
16 species 0 species
UBERON:00009551600160
male germ cell 0.0073.011 gene 1 gene 14 genes 1 species 1 species CL:0000015111411
smooth muscle tissue 1.0070.844 genes 0 gene
12 genes 4 species 0 species
UBERON:0001135401240
upper arm skin -1.0055.350 gene
1 gene 15 genes 0 species
1 species UBERON:0004263011501
heart right ventricle -0.3390.561 gene 2 genes 13 genes 1 species 2 species UBERON:0002080121312
lip 1.0049.721 gene 0 gene
15 genes 1 species 0 species
UBERON:0001833101510
skin of hip -1.0059.920 gene
1 gene 15 genes 0 species
1 species UBERON:0001554011501
female gonad 0.6794.0310 genes 2 genes 4 genes 10 species 2 species UBERON:00009921024102
ileum 0.3368.974 genes 2 genes 10 genes 4 species 2 species UBERON:0002116421042
mitral valve 1.0037.091 gene 0 gene
15 genes 1 species 0 species
UBERON:0002135101510
cartilage tissue 0.0057.391 gene 1 gene 14 genes 1 species 1 species UBERON:0002418111411
blastopore, primitive streak 1.0067.051 gene 0 gene
15 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101510
thyroid gland 0.5070.103 genes 1 gene 12 genes 3 species 1 species UBERON:0002046311231
adenohypophysis 1.0076.092 genes 0 gene
14 genes 2 species 0 species
UBERON:0002196201420
choroid plexus of fourth ventricle -1.0045.050 gene
1 gene 15 genes 0 species
1 species UBERON:0002290011501
larva 1.0020.501 gene 0 gene
15 genes 1 species 0 species
UBERON:0002548101510
bone element 1.0063.223 genes 0 gene
13 genes 3 species 0 species
UBERON:0001474301330
cerebellum 1.0094.8411 genes 0 gene
5 genes 11 species 0 species
UBERON:00020371105110
fundus of stomach 1.0071.621 gene 0 gene
15 genes 1 species 0 species
UBERON:0001160101510
pineal body 1.0065.481 gene 0 gene
15 genes 1 species 0 species
UBERON:0001905101510
dermis 1.0060.531 gene 0 gene
15 genes 1 species 0 species
UBERON:0002067101510
cardiac ventricle 1.0083.444 genes 0 gene
12 genes 4 species 0 species
UBERON:0002082401240
outflow tract 1.0066.562 genes 0 gene
14 genes 2 species 0 species
UBERON:0004145201420
saccule of membranous labyrinth -1.0048.260 gene
1 gene 15 genes 0 species
1 species UBERON:0001854011501
camera-type eye 1.0057.256 genes 0 gene
10 genes 6 species 0 species
UBERON:0000019601060
caudal tuberculum, substantia nigra 1.0065.862 genes 0 gene
14 genes 2 species 0 species
UBERON:2000633, UBERON:0002038201420
choroid plexus 0.3323.422 genes 1 gene 13 genes 2 species 1 species UBERON:0001886211321
thymus 0.5067.033 genes 1 gene 12 genes 3 species 1 species UBERON:0002370311231
tendon 1.0071.451 gene 0 gene
15 genes 1 species 0 species
UBERON:0000043101510
motor neuron 1.0078.371 gene 0 gene
15 genes 1 species 0 species
CL:0000100101510
epithelium of lens 1.0062.701 gene 0 gene
15 genes 1 species 0 species
UBERON:0001803101510
right cardiac atrium 1.0065.152 genes 0 gene
14 genes 2 species 0 species
UBERON:0002078201420
internal carotid artery 1.0078.771 gene 0 gene
15 genes 1 species 0 species
UBERON:0001532101510
1st arch mandibular component 1.0061.891 gene 0 gene
15 genes 1 species 0 species
UBERON:0007237101510
endocardial endothelium -1.0017.070 gene
1 gene 15 genes 0 species
1 species UBERON:0005316011501
Ammon's horn 1.0065.534 genes 0 gene
12 genes 4 species 0 species
UBERON:0001954401240
epiblast (generic) 1.0060.201 gene 0 gene
15 genes 1 species 0 species
UBERON:0002532101510
adrenal cortex 1.0099.232 genes 0 gene
14 genes 2 species 0 species
UBERON:0001235201420
sternocleidomastoid -1.0044.530 gene
1 gene 15 genes 0 species
1 species UBERON:0001128011501
brainstem 0.6070.904 genes 1 gene 11 genes 4 species 1 species UBERON:0002298411141
aorta 1.0084.554 genes 0 gene
12 genes 4 species 0 species
UBERON:0000947401240
right kidney 1.0059.751 gene 0 gene
15 genes 1 species 0 species
UBERON:0004539101510
retina 1.0081.984 genes 0 gene
12 genes 4 species 0 species
UBERON:0000966401240
somite 1.0063.031 gene 0 gene
15 genes 1 species 0 species
UBERON:0002329101510
intestine 0.7576.657 genes 1 gene 8 genes 7 species 1 species UBERON:000016071871
esophagus 1.0077.914 genes 0 gene
12 genes 4 species 0 species
UBERON:0001043401240
myocardium 1.0067.262 genes 0 gene
14 genes 2 species 0 species
UBERON:0002349201420
blastula 0.336.472 genes 1 gene 13 genes 2 species 1 species UBERON:0000307211321
right testis 1.0041.621 gene 0 gene
15 genes 1 species 0 species
UBERON:0004534101510
blood -0.4365.732 genes 5 genes 9 genes 2 species 5 species UBERON:000017825925
adipose tissue 1.0074.906 genes 0 gene
10 genes 6 species 0 species
UBERON:0001013601060
embryonic head 1.0028.232 genes 0 gene
14 genes 2 species 0 species
UBERON:0008816201420
skeletal muscle tissue 0.8067.129 genes 1 gene 6 genes 9 species 1 species UBERON:000113491691
spleen 0.4062.357 genes 3 genes 6 genes 7 species 3 species UBERON:000210673673
kidney 0.6360.7013 genes 3 genes 0 gene
13 species 3 species UBERON:00021131330133
intestinal epithelium -1.0053.830 gene
1 gene 15 genes 0 species
1 species UBERON:0001277011501
pericardium 0.0061.371 gene 1 gene 14 genes 1 species 1 species UBERON:0002407111411
lung, swim bladder 0.8284.0510 genes 1 gene 5 genes 10 species 1 species UBERON:0002048, UBERON:00068601015101
cardiac atrium 1.0094.194 genes 0 gene
12 genes 4 species 0 species
UBERON:0002081401240
ventral horn of spinal cord 1.0079.151 gene 0 gene
15 genes 1 species 0 species
UBERON:0002257101510
islet of Langerhans 1.0090.452 genes 0 gene
14 genes 2 species 0 species
UBERON:0000006201420
neural tube 1.0069.272 genes 0 gene
14 genes 2 species 0 species
UBERON:0001049201420
pleura 1.0069.101 gene 0 gene
15 genes 1 species 0 species
UBERON:0000977101510
endocardial cushion 1.0064.911 gene 0 gene
15 genes 1 species 0 species
UBERON:0002062101510
cerebral hemisphere 1.0069.5212 genes 0 gene
4 genes 12 species 0 species
UBERON:00018691204120
pigmented layer of retina -1.0056.520 gene
2 genes 14 genes 0 species
2 species UBERON:0001782021402
1st arch maxillary component 1.0061.911 gene 0 gene
15 genes 1 species 0 species
UBERON:0007238101510
cerebellar cortex 1.0092.733 genes 0 gene
13 genes 3 species 0 species
UBERON:0002129301330
heart 0.8591.3212 genes 1 gene 3 genes 12 species 1 species UBERON:00009481213121
liver 0.3858.6811 genes 5 genes 0 gene
11 species 5 species UBERON:00021071150115
ileal epithelium -1.0046.020 gene
1 gene 15 genes 0 species
1 species UBERON:0008345011501
colon 0.7565.297 genes 1 gene 8 genes 7 species 1 species UBERON:000115571871
left testis 1.0041.371 gene 0 gene
15 genes 1 species 0 species
UBERON:0004533101510
telencephalic ventricle 1.0055.921 gene 0 gene
15 genes 1 species 0 species
UBERON:0002285101510
muscle organ 0.8348.4011 genes 1 gene 4 genes 11 species 1 species UBERON:00016301114111
striatum 1.0064.562 genes 0 gene
14 genes 2 species 0 species
UBERON:0002435201420
myocardium of ventricle 1.0096.141 gene 0 gene
15 genes 1 species 0 species
UBERON:0001083101510
neurohypophysis 1.0067.402 genes 0 gene
14 genes 2 species 0 species
UBERON:0002198201420
presomitic mesoderm 1.0066.501 gene 0 gene
15 genes 1 species 0 species
UBERON:0003059101510
olfactory epithelium 1.0055.871 gene 0 gene
15 genes 1 species 0 species
UBERON:0001997101510
dorsal root ganglion 1.0079.422 genes 0 gene
14 genes 2 species 0 species
UBERON:0000044201420
aortic valve 1.0081.001 gene 0 gene
15 genes 1 species 0 species
UBERON:0002137101510
ciliary body -1.0061.890 gene
1 gene 15 genes 0 species
1 species UBERON:0001775011501
ear vesicle 1.0055.051 gene 0 gene
15 genes 1 species 0 species
UBERON:0003051101510
gall bladder 0.3368.132 genes 1 gene 13 genes 2 species 1 species UBERON:0002110211321
atrioventricular valve 1.0067.572 genes 0 gene
14 genes 2 species 0 species
UBERON:0002133201420
parathyroid gland, pharyngeal gill -1.0030.560 gene
1 gene 15 genes 0 species
1 species UBERON:0001132, UBERON:0000206011501
gingiva 1.0065.571 gene 0 gene
15 genes 1 species 0 species
UBERON:0001828101510
peritoneum 1.0059.821 gene 0 gene
15 genes 1 species 0 species
UBERON:0002358101510
zygote -1.0031.040 gene
1 gene 15 genes 0 species
1 species CL:0000365011501
medulla oblongata 1.0069.723 genes 0 gene
13 genes 3 species 0 species
UBERON:0001896301330
pylorus 1.0064.101 gene 0 gene
15 genes 1 species 0 species
UBERON:0001166101510
caudate nucleus 1.0067.481 gene 0 gene
15 genes 1 species 0 species
UBERON:0001873101510
embryo 1.0059.969 genes 0 gene
7 genes 9 species 0 species
UBERON:000092290790
left ovary 1.0063.591 gene 0 gene
15 genes 1 species 0 species
UBERON:0002119101510

Do not show this banner again