We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
chordate pharynx 1.0057.881 gene 0 gene
20 genes 1 species 0 species
UBERON:0001042102010
postcranial axial skeleton 1.0057.461 gene 0 gene
20 genes 1 species 0 species
UBERON:0002090102010
epithelial cell of pancreas -1.0079.930 gene
1 gene 20 genes 0 species
1 species CL:0000083012001
hindlimb, pelvic fin 1.0061.645 genes 0 gene
16 genes 5 species 0 species
UBERON:0002103, UBERON:0000152501650
hypothalamus 1.0080.357 genes 0 gene
14 genes 7 species 0 species
UBERON:0001898701470
nervous system 1.0061.0921 genes 0 gene
0 gene
21 species 0 species
UBERON:00010162100210
gingival epithelium -1.0071.370 gene
1 gene 20 genes 0 species
1 species UBERON:0001949012001
gastrula 1.0022.032 genes 0 gene
19 genes 2 species 0 species
UBERON:0004734201920
retinal neural layer 1.0087.022 genes 0 gene
19 genes 2 species 0 species
UBERON:0003902201920
midbrain 1.0078.713 genes 0 gene
18 genes 3 species 0 species
UBERON:0001891301830
hindbrain 1.0066.6114 genes 0 gene
7 genes 14 species 0 species
UBERON:00020281407140
cranial nerve II -1.0059.980 gene
1 gene 20 genes 0 species
1 species UBERON:0000941012001
stomach 0.2045.943 genes 2 genes 16 genes 3 species 2 species UBERON:0000945321632
pituitary gland 1.0092.808 genes 0 gene
13 genes 8 species 0 species
UBERON:0000007801380
inferior vagus X ganglion 1.0078.381 gene 0 gene
20 genes 1 species 0 species
UBERON:0005363102010
female reproductive system 1.0079.968 genes 0 gene
13 genes 8 species 0 species
UBERON:0000474801380
epithelium of esophagus -1.0064.970 gene
1 gene 20 genes 0 species
1 species UBERON:0001976012001
pancreas 0.5058.063 genes 1 gene 17 genes 3 species 1 species UBERON:0001264311731
kidney epithelium -1.0049.750 gene
1 gene 20 genes 0 species
1 species UBERON:0004819012001
upper leg skin 1.0058.591 gene 0 gene
20 genes 1 species 0 species
UBERON:0004262102010
limb, paired fin 1.0024.005 genes 0 gene
16 genes 5 species 0 species
UBERON:0002101, UBERON:0002534501650
face 1.0074.996 genes 0 gene
15 genes 6 species 0 species
UBERON:0001456601560
blood vessel 1.0064.572 genes 0 gene
19 genes 2 species 0 species
UBERON:0001981201920
putamen 1.0093.381 gene 0 gene
20 genes 1 species 0 species
UBERON:0001874102010
telencephalon 1.0065.5716 genes 0 gene
5 genes 16 species 0 species
UBERON:00018931605160
eyeball of camera-type eye 1.0027.895 genes 0 gene
16 genes 5 species 0 species
UBERON:0010230501650
right ovary 1.0050.381 gene 0 gene
20 genes 1 species 0 species
UBERON:0002118102010
testis 0.4087.1814 genes 6 genes 1 gene 14 species 6 species UBERON:00004731461146
autopod skin -1.007.220 gene
1 gene 20 genes 0 species
1 species UBERON:0015790012001
multi-cellular organism 1.0049.8421 genes 0 gene
0 gene
21 species 0 species
UBERON:00004682100210
ventricular zone 1.0063.752 genes 0 gene
19 genes 2 species 0 species
UBERON:0003053201920
embryonic post-anal tail 0.0055.231 gene 1 gene 19 genes 1 species 1 species UBERON:0007144111911
peripheral nervous system 1.0065.372 genes 0 gene
19 genes 2 species 0 species
UBERON:0000010201920
central nervous system 1.0066.1521 genes 0 gene
0 gene
21 species 0 species
UBERON:00010172100210
fibroblast -1.0026.930 gene
4 genes 17 genes 0 species
4 species CL:0000057041704
mesonephros -1.0013.250 gene
1 gene 20 genes 0 species
1 species UBERON:0000080012001
head 1.0045.997 genes 0 gene
14 genes 7 species 0 species
UBERON:0000033701470
tongue muscle -1.0012.560 gene
1 gene 20 genes 0 species
1 species UBERON:0000378012001
trigeminal ganglion -1.0077.140 gene
1 gene 20 genes 0 species
1 species UBERON:0001675012001
forebrain 1.0062.1916 genes 0 gene
5 genes 16 species 0 species
UBERON:00018901605160
vertebral column -1.0046.040 gene
1 gene 20 genes 0 species
1 species UBERON:0001130012001
caecum -0.3379.731 gene 2 genes 18 genes 1 species 2 species UBERON:0001153121812
diencephalon 1.0074.978 genes 0 gene
13 genes 8 species 0 species
UBERON:0001894801380
heart left ventricle, primary heart field -0.5050.081 gene 3 genes 17 genes 1 species 3 species UBERON:0002084, UBERON:0004140131713
olfactory bulb 0.3371.212 genes 1 gene 18 genes 2 species 1 species UBERON:0002264211821
lens of camera-type eye 1.0052.551 gene 0 gene
20 genes 1 species 0 species
UBERON:0000965102010
ear 1.0073.061 gene 0 gene
20 genes 1 species 0 species
UBERON:0001690102010
brain 1.0080.4321 genes 0 gene
0 gene
21 species 0 species
UBERON:00009552100210
collection of basal ganglia 1.0072.213 genes 0 gene
18 genes 3 species 0 species
UBERON:0010011301830
male germ cell 1.0070.853 genes 0 gene
18 genes 3 species 0 species
CL:0000015301830
upper arm skin -1.0057.970 gene
1 gene 20 genes 0 species
1 species UBERON:0004263012001
smooth muscle tissue -0.3367.561 gene 2 genes 18 genes 1 species 2 species UBERON:0001135121812
heart right ventricle 0.0064.791 gene 1 gene 19 genes 1 species 1 species UBERON:0002080111911
lip -1.0012.270 gene
1 gene 20 genes 0 species
1 species UBERON:0001833012001
ganglionic layer of retina 1.0058.891 gene 0 gene
20 genes 1 species 0 species
UBERON:0001792102010
gonad 1.0061.5215 genes 0 gene
6 genes 15 species 0 species
UBERON:00009911506150
skin of hip 1.0058.771 gene 0 gene
20 genes 1 species 0 species
UBERON:0001554102010
female gonad -0.2949.275 genes 9 genes 7 genes 5 species 9 species UBERON:000099259759
internal ear 1.0085.991 gene 0 gene
20 genes 1 species 0 species
UBERON:0001846102010
ileum -0.3328.042 genes 4 genes 15 genes 2 species 4 species UBERON:0002116241524
mitral valve -1.0011.490 gene
1 gene 20 genes 0 species
1 species UBERON:0002135012001
olfactory lobe 1.0065.983 genes 0 gene
18 genes 3 species 0 species
UBERON:0005366301830
cartilage tissue -0.3358.601 gene 2 genes 18 genes 1 species 2 species UBERON:0002418121812
thyroid gland -0.2076.182 genes 3 genes 16 genes 2 species 3 species UBERON:0002046231623
adenohypophysis 1.0098.762 genes 0 gene
19 genes 2 species 0 species
UBERON:0002196201920
midbrain tegmentum 1.0069.553 genes 0 gene
18 genes 3 species 0 species
UBERON:0001943301830
larva 1.0036.711 gene 0 gene
20 genes 1 species 0 species
UBERON:0002548102010
cerebellum 0.7367.2613 genes 2 genes 6 genes 13 species 2 species UBERON:00020371326132
fundus of stomach 1.0060.681 gene 0 gene
20 genes 1 species 0 species
UBERON:0001160102010
cardiac ventricle 1.0082.772 genes 0 gene
19 genes 2 species 0 species
UBERON:0002082201920
camera-type eye 1.0086.995 genes 0 gene
16 genes 5 species 0 species
UBERON:0000019501650
caudal tuberculum, substantia nigra 1.0080.761 gene 0 gene
20 genes 1 species 0 species
UBERON:2000633, UBERON:0002038102010
choroid plexus 0.0065.081 gene 1 gene 19 genes 1 species 1 species UBERON:0001886111911
thymus -1.0070.960 gene
5 genes 16 genes 0 species
5 species UBERON:0002370051605
forelimb, pectoral fin 1.0074.992 genes 0 gene
19 genes 2 species 0 species
UBERON:0002102, UBERON:0000151201920
tendon 1.0075.801 gene 0 gene
20 genes 1 species 0 species
UBERON:0000043102010
olfactory cortex 0.0056.241 gene 1 gene 19 genes 1 species 1 species UBERON:0002894111911
right cardiac atrium 0.008.441 gene 1 gene 19 genes 1 species 1 species UBERON:0002078111911
endocardial endothelium -1.0016.400 gene
1 gene 20 genes 0 species
1 species UBERON:0005316012001
calcareous tooth -1.0063.140 gene
1 gene 20 genes 0 species
1 species UBERON:0001091012001
Ammon's horn 1.0067.115 genes 0 gene
16 genes 5 species 0 species
UBERON:0001954501650
epiblast (generic) 1.0057.741 gene 0 gene
20 genes 1 species 0 species
UBERON:0002532102010
adrenal cortex 1.0077.982 genes 0 gene
19 genes 2 species 0 species
UBERON:0001235201920
brainstem 0.6777.275 genes 1 gene 15 genes 5 species 1 species UBERON:0002298511551
aorta -0.3377.421 gene 2 genes 18 genes 1 species 2 species UBERON:0000947121812
right kidney -1.0015.290 gene
1 gene 20 genes 0 species
1 species UBERON:0004539012001
retina 0.6089.594 genes 1 gene 16 genes 4 species 1 species UBERON:0000966411641
intestine 0.6739.885 genes 1 gene 15 genes 5 species 1 species UBERON:0000160511551
esophagus 0.0066.612 genes 2 genes 17 genes 2 species 2 species UBERON:0001043221722
myocardium -1.0075.880 gene
1 gene 20 genes 0 species
1 species UBERON:0002349012001
blastula 0.3317.802 genes 1 gene 18 genes 2 species 1 species UBERON:0000307211821
right testis 1.0054.601 gene 0 gene
20 genes 1 species 0 species
UBERON:0004534102010
blood -0.7150.551 gene 6 genes 14 genes 1 species 6 species UBERON:0000178161416
adipose tissue 0.3358.854 genes 2 genes 15 genes 4 species 2 species UBERON:0001013421542
embryonic head 1.0033.921 gene 0 gene
20 genes 1 species 0 species
UBERON:0008816102010
skeletal muscle tissue -0.5468.753 genes 10 genes 8 genes 3 species 10 species UBERON:00011343108310
integumental system 1.0060.327 genes 0 gene
14 genes 7 species 0 species
UBERON:0002416701470
cardiovascular system 1.0060.327 genes 0 gene
14 genes 7 species 0 species
UBERON:0004535701470
spleen -0.6440.662 genes 9 genes 10 genes 2 species 9 species UBERON:0002106291029
kidney -0.3853.844 genes 9 genes 8 genes 4 species 9 species UBERON:000211349849
pericardium 0.0078.291 gene 1 gene 19 genes 1 species 1 species UBERON:0002407111911
lung, swim bladder 0.0852.777 genes 6 genes 8 genes 7 species 6 species UBERON:0002048, UBERON:000686076876
cardiac atrium -0.3378.111 gene 2 genes 18 genes 1 species 2 species UBERON:0002081121812
islet of Langerhans 1.0069.092 genes 0 gene
19 genes 2 species 0 species
UBERON:0000006201920
neural tube 1.0065.253 genes 0 gene
18 genes 3 species 0 species
UBERON:0001049301830
pleura 1.0077.241 gene 0 gene
20 genes 1 species 0 species
UBERON:0000977102010
notochord 1.0055.981 gene 0 gene
20 genes 1 species 0 species
UBERON:0002328102010
appendicular skeleton -1.0063.630 gene
1 gene 20 genes 0 species
1 species UBERON:0002091012001
pigmented layer of retina -1.0060.970 gene
1 gene 20 genes 0 species
1 species UBERON:0001782012001
cerebellar cortex 1.0072.584 genes 0 gene
17 genes 4 species 0 species
UBERON:0002129401740
cranial ganglion 1.0074.992 genes 0 gene
19 genes 2 species 0 species
UBERON:0001714201920
heart -0.2254.427 genes 11 genes 3 genes 7 species 11 species UBERON:00009487113711
liver -0.4347.316 genes 15 genes 0 gene
6 species 15 species UBERON:00021076150615
cranium 1.0053.532 genes 0 gene
19 genes 2 species 0 species
UBERON:0003128201920
colon -0.1154.084 genes 5 genes 12 genes 4 species 5 species UBERON:0001155451245
left testis 1.0054.631 gene 0 gene
20 genes 1 species 0 species
UBERON:0004533102010
muscle organ 0.7182.546 genes 1 gene 14 genes 6 species 1 species UBERON:0001630611461
striatum 1.0098.932 genes 0 gene
19 genes 2 species 0 species
UBERON:0002435201920
neurohypophysis 1.0097.881 gene 0 gene
20 genes 1 species 0 species
UBERON:0002198102010
olfactory epithelium 1.0072.121 gene 0 gene
20 genes 1 species 0 species
UBERON:0001997102010
meninx 1.0068.411 gene 0 gene
20 genes 1 species 0 species
UBERON:0002360102010
dorsal root ganglion 1.0075.642 genes 0 gene
19 genes 2 species 0 species
UBERON:0000044201920
musculature 1.0080.776 genes 0 gene
15 genes 6 species 0 species
UBERON:0001015601560
gall bladder 0.0052.681 gene 1 gene 19 genes 1 species 1 species UBERON:0002110111911
parathyroid gland, pharyngeal gill -1.0018.440 gene
1 gene 20 genes 0 species
1 species UBERON:0001132, UBERON:0000206012001
renal system 1.0078.065 genes 0 gene
16 genes 5 species 0 species
UBERON:0001008501650
gingiva -1.0060.300 gene
1 gene 20 genes 0 species
1 species UBERON:0001828012001
peritoneum 1.0077.761 gene 0 gene
20 genes 1 species 0 species
UBERON:0002358102010
zygote -1.0036.540 gene
1 gene 20 genes 0 species
1 species CL:0000365012001
nerve 1.0049.991 gene 0 gene
20 genes 1 species 0 species
UBERON:0001021102010
respiratory system 1.0062.947 genes 0 gene
14 genes 7 species 0 species
UBERON:0001004701470
medulla oblongata 0.3383.322 genes 1 gene 18 genes 2 species 1 species UBERON:0001896211821
pylorus -1.0078.600 gene
1 gene 20 genes 0 species
1 species UBERON:0001166012001
caudate nucleus 1.0091.991 gene 0 gene
20 genes 1 species 0 species
UBERON:0001873102010
embryo 0.6463.999 genes 2 genes 10 genes 9 species 2 species UBERON:0000922921092
left ovary 1.0051.311 gene 0 gene
20 genes 1 species 0 species
UBERON:0002119102010

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