We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
female gonad 0.1179.995 genes 4 genes 7 genes 5 species 4 species UBERON:000099254754
neurohypophysis -1.009.580 gene
1 gene 15 genes 0 species
1 species UBERON:0002198011501
kidney blood vessel -1.0059.990 gene
1 gene 15 genes 0 species
1 species UBERON:0003517011501
aortic valve -1.0042.310 gene
1 gene 15 genes 0 species
1 species UBERON:0002137011501
embryo -0.2039.882 genes 3 genes 11 genes 2 species 3 species UBERON:0000922231123
adipose tissue 0.0080.523 genes 3 genes 10 genes 3 species 3 species UBERON:0001013331033
dorsal root ganglion 0.0079.601 gene 1 gene 14 genes 1 species 1 species UBERON:0000044111411
vertebral column -1.0046.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001130011501
internal carotid artery -1.0040.890 gene
1 gene 15 genes 0 species
1 species UBERON:0001532011501
thymus 0.6079.004 genes 1 gene 11 genes 4 species 1 species UBERON:0002370411141
aorta 0.5076.373 genes 1 gene 12 genes 3 species 1 species UBERON:0000947311231
parotid gland 0.0075.711 gene 1 gene 14 genes 1 species 1 species UBERON:0001831111411
tendon 1.0077.441 gene 0 gene
15 genes 1 species 0 species
UBERON:0000043101510
cardiac atrium 0.0082.842 genes 2 genes 12 genes 2 species 2 species UBERON:0002081221222
metanephric ureteric bud -1.0040.270 gene
1 gene 15 genes 0 species
1 species UBERON:0005080011501
head 1.0043.464 genes 0 gene
12 genes 4 species 0 species
UBERON:0000033401240
globus pallidus 0.0076.181 gene 1 gene 14 genes 1 species 1 species UBERON:0001875111411
cranial ganglion 0.0069.211 gene 1 gene 14 genes 1 species 1 species UBERON:0001714111411
ureter smooth muscle 1.0045.191 gene 0 gene
15 genes 1 species 0 species
UBERON:0009919101510
renal corpuscle -1.0039.910 gene
1 gene 15 genes 0 species
1 species UBERON:0001229011501
lung 0.6082.938 genes 2 genes 6 genes 8 species 2 species UBERON:000204882682
cerebral hemisphere 1.0038.938 genes 0 gene
8 genes 8 species 0 species
UBERON:000186980880
intestinal epithelium -1.0041.670 gene
1 gene 15 genes 0 species
1 species UBERON:0001277011501
Wulst, primary visual cortex 0.0083.542 genes 2 genes 12 genes 2 species 2 species UBERON:0014756, UBERON:0002436221222
inferior vagus X ganglion 1.0076.141 gene 0 gene
15 genes 1 species 0 species
UBERON:0005363101510
stomach 0.6081.304 genes 1 gene 11 genes 4 species 1 species UBERON:0000945411141
ciliary body -1.0037.490 gene
1 gene 15 genes 0 species
1 species UBERON:0001775011501
male reproductive system 1.0034.0114 genes 0 gene
2 genes 14 species 0 species
UBERON:00000791402140
presomitic mesoderm -1.0044.670 gene
1 gene 15 genes 0 species
1 species UBERON:0003059011501
testis 0.8797.4814 genes 1 gene 1 gene 14 species 1 species UBERON:00004731411141
eyeball of camera-type eye 0.0038.602 genes 2 genes 12 genes 2 species 2 species UBERON:0010230221222
caudate nucleus 1.0090.741 gene 0 gene
15 genes 1 species 0 species
UBERON:0001873101510
medulla oblongata 0.0076.841 gene 1 gene 14 genes 1 species 1 species UBERON:0001896111411
adrenal gland 0.3385.814 genes 2 genes 10 genes 4 species 2 species UBERON:0002369421042
left cardiac atrium 1.0039.901 gene 0 gene
15 genes 1 species 0 species
UBERON:0002079101510
gingiva 1.0084.561 gene 0 gene
15 genes 1 species 0 species
UBERON:0001828101510
cranial nerve II -1.0038.780 gene
1 gene 15 genes 0 species
1 species UBERON:0000941011501
pituitary gland -0.1484.823 genes 4 genes 9 genes 3 species 4 species UBERON:000000734934
milk 1.0017.951 gene 0 gene
15 genes 1 species 0 species
UBERON:0001913101510
heart 0.3892.629 genes 4 genes 3 genes 9 species 4 species UBERON:000094894394
autopod skin -1.0026.900 gene
1 gene 15 genes 0 species
1 species UBERON:0015790011501
skin of leg 1.0080.981 gene 0 gene
15 genes 1 species 0 species
UBERON:0001511101510
epithelial cell of pancreas -1.0056.060 gene
1 gene 15 genes 0 species
1 species CL:0000083011501
colon 0.2586.325 genes 3 genes 8 genes 5 species 3 species UBERON:000115553853
laryngeal cartilage -1.0034.440 gene
1 gene 15 genes 0 species
1 species UBERON:0001739011501
hypothalamus -0.3390.202 genes 4 genes 10 genes 2 species 4 species UBERON:0001898241024
saliva-secreting gland -0.5082.181 gene 3 genes 12 genes 1 species 3 species UBERON:0001044131213
synovial membrane of synovial joint -1.0022.970 gene
1 gene 15 genes 0 species
1 species UBERON:0002018011501
ear vesicle -1.0044.230 gene
1 gene 15 genes 0 species
1 species UBERON:0003051011501
utricle of membranous labyrinth -1.0038.440 gene
1 gene 15 genes 0 species
1 species UBERON:0001853011501
myocardium of ventricle 0.0049.311 gene 1 gene 14 genes 1 species 1 species UBERON:0001083111411
mitral valve 1.0036.121 gene 0 gene
15 genes 1 species 0 species
UBERON:0002135101510
substantia nigra 0.0089.141 gene 1 gene 14 genes 1 species 1 species UBERON:0002038111411
camera-type eye 1.0040.223 genes 0 gene
13 genes 3 species 0 species
UBERON:0000019301330
skin of hip 1.0081.991 gene 0 gene
15 genes 1 species 0 species
UBERON:0001554101510
olfactory epithelium -1.0038.600 gene
1 gene 15 genes 0 species
1 species UBERON:0001997011501
anterior leaflet of mitral valve, atrioventricular valve, tricuspid valve cusp 0.0039.641 gene 1 gene 14 genes 1 species 1 species UBERON:0014854, UBERON:0002133, UBERON:0005998111411
infraspinatus muscle, supracoracoideus muscle, supraspinatus muscle -1.0017.030 gene
1 gene 15 genes 0 species
1 species UBERON:0001477, UBERON:0014840, UBERON:0002383011501
otic placode -1.0047.580 gene
1 gene 15 genes 0 species
1 species UBERON:0003069011501
left ovary 1.0082.921 gene 0 gene
15 genes 1 species 0 species
UBERON:0002119101510
ear -1.0045.390 gene
1 gene 15 genes 0 species
1 species UBERON:0001690011501
putamen 1.0090.781 gene 0 gene
15 genes 1 species 0 species
UBERON:0001874101510
skin of external ear -1.0038.230 gene
1 gene 15 genes 0 species
1 species UBERON:0001459011501
bronchus 1.0074.952 genes 0 gene
14 genes 2 species 0 species
UBERON:0002185201420
mammillary body -1.0041.270 gene
1 gene 15 genes 0 species
1 species UBERON:0002206011501
optic fissure -1.0040.620 gene
1 gene 15 genes 0 species
1 species UBERON:0005412011501
midbrain 1.0076.602 genes 0 gene
14 genes 2 species 0 species
UBERON:0001891201420
urinary bladder 0.5085.533 genes 1 gene 12 genes 3 species 1 species UBERON:0001255311231
limb 1.0042.935 genes 0 gene
11 genes 5 species 0 species
UBERON:0002101501150
skin epidermis -1.0038.630 gene
1 gene 15 genes 0 species
1 species UBERON:0001003011501
metanephric collecting duct -1.0042.420 gene
1 gene 15 genes 0 species
1 species UBERON:0004737011501
fibroblast -0.3352.591 gene 2 genes 13 genes 1 species 2 species CL:0000057121312
spleen 0.3387.956 genes 3 genes 7 genes 6 species 3 species UBERON:000210663763
large intestine 1.0081.125 genes 0 gene
11 genes 5 species 0 species
UBERON:0000059501150
kidney 0.6078.308 genes 2 genes 6 genes 8 species 2 species UBERON:000211382682
kidney epithelium 0.0056.091 gene 1 gene 14 genes 1 species 1 species UBERON:0004819111411
amygdala -0.3389.831 gene 2 genes 13 genes 1 species 2 species UBERON:0001876121312
female reproductive system 1.0071.585 genes 0 gene
11 genes 5 species 0 species
UBERON:0000474501150
embryonic head -1.008.670 gene
1 gene 15 genes 0 species
1 species UBERON:0008816011501
epithelium of bronchus 1.0033.312 genes 0 gene
14 genes 2 species 0 species
UBERON:0002031201420
forebrain 1.0079.409 genes 0 gene
7 genes 9 species 0 species
UBERON:000189090790
right ovary 1.0082.021 gene 0 gene
15 genes 1 species 0 species
UBERON:0002118101510
ventral horn of spinal cord -1.0041.850 gene
1 gene 15 genes 0 species
1 species UBERON:0002257011501
duodenum 0.2084.013 genes 2 genes 11 genes 3 species 2 species UBERON:0002114321132
primitive streak -1.0040.630 gene
1 gene 15 genes 0 species
1 species UBERON:0004341011501
bone element 1.0041.614 genes 0 gene
12 genes 4 species 0 species
UBERON:0001474401240
ventricular zone 0.0090.081 gene 1 gene 14 genes 1 species 1 species UBERON:0003053111411
brain blood vessel -1.0039.180 gene
1 gene 15 genes 0 species
1 species UBERON:0003499011501
embryonic post-anal tail -1.0034.100 gene
2 genes 14 genes 0 species
2 species UBERON:0007144021402
seminiferous tubule of testis 1.0095.371 gene 0 gene
15 genes 1 species 0 species
UBERON:0001343101510
epithelium of lens -1.0039.680 gene
1 gene 15 genes 0 species
1 species UBERON:0001803011501
motor neuron -1.0063.260 gene
1 gene 15 genes 0 species
1 species CL:0000100011501
multi-cellular organism 1.0090.2316 genes 0 gene
0 gene
16 species 0 species
UBERON:00004681600160
amniotic fluid 1.0079.611 gene 0 gene
15 genes 1 species 0 species
UBERON:0000173101510
upper arm skin -1.0055.580 gene
1 gene 15 genes 0 species
1 species UBERON:0004263011501
right kidney 1.0049.141 gene 0 gene
15 genes 1 species 0 species
UBERON:0004539101510
myocardium 1.0091.512 genes 0 gene
14 genes 2 species 0 species
UBERON:0002349201420
fundus of stomach 1.0079.351 gene 0 gene
15 genes 1 species 0 species
UBERON:0001160101510
jejunum 0.6078.854 genes 1 gene 11 genes 4 species 1 species UBERON:0002115411141
adenohypophysis 0.0085.591 gene 1 gene 14 genes 1 species 1 species UBERON:0002196111411
bone marrow 0.3378.654 genes 2 genes 10 genes 4 species 2 species UBERON:0002371421042
thyroid gland -0.5081.561 gene 3 genes 12 genes 1 species 3 species UBERON:0002046131213
gall bladder 0.0089.561 gene 1 gene 14 genes 1 species 1 species UBERON:0002110111411
intestine 1.0083.106 genes 0 gene
10 genes 6 species 0 species
UBERON:0000160601060
penis 0.0079.581 gene 1 gene 14 genes 1 species 1 species UBERON:0000989111411
choroid plexus -1.0023.420 gene
1 gene 15 genes 0 species
1 species UBERON:0001886011501
smooth muscle tissue 1.0088.744 genes 0 gene
12 genes 4 species 0 species
UBERON:0001135401240
right lobe of thyroid gland 1.0081.021 gene 0 gene
15 genes 1 species 0 species
UBERON:0001119101510
trachea -0.3375.111 gene 2 genes 13 genes 1 species 2 species UBERON:0003126121312
epithelium of small intestine -1.0039.860 gene
1 gene 15 genes 0 species
1 species UBERON:0001902011501
pes -1.0040.630 gene
1 gene 15 genes 0 species
1 species UBERON:0002387011501
intercostal muscle -1.0040.580 gene
2 genes 14 genes 0 species
2 species UBERON:0001111021402
1st arch maxillary component -1.0041.060 gene
1 gene 15 genes 0 species
1 species UBERON:0007238011501
pericardium 1.0082.591 gene 0 gene
15 genes 1 species 0 species
UBERON:0002407101510
retina 0.0040.342 genes 2 genes 12 genes 2 species 2 species UBERON:0000966221222
pigmented layer of retina 0.0076.201 gene 1 gene 14 genes 1 species 1 species UBERON:0001782111411
1st arch mandibular component -1.0041.150 gene
1 gene 15 genes 0 species
1 species UBERON:0007237011501
endocardial cushion -1.0039.650 gene
1 gene 15 genes 0 species
1 species UBERON:0002062011501
striatum 0.0037.631 gene 1 gene 14 genes 1 species 1 species UBERON:0002435111411
sternocleidomastoid -1.0053.320 gene
1 gene 15 genes 0 species
1 species UBERON:0001128011501
metanephros 0.3365.192 genes 1 gene 13 genes 2 species 1 species UBERON:0000081211321
skeletal muscle tissue 0.6086.308 genes 2 genes 6 genes 8 species 2 species UBERON:000113482682
neural tube 1.0033.581 gene 0 gene
15 genes 1 species 0 species
UBERON:0001049101510
vault of skull -1.0041.000 gene
1 gene 15 genes 0 species
1 species UBERON:0004339011501
extra-ocular muscle -1.0042.550 gene
1 gene 15 genes 0 species
1 species UBERON:0001601011501
gastrula -1.0050.740 gene
1 gene 15 genes 0 species
1 species UBERON:0004734011501
right cardiac atrium 1.0034.182 genes 0 gene
14 genes 2 species 0 species
UBERON:0002078201420
cochlea -1.0043.110 gene
1 gene 15 genes 0 species
1 species UBERON:0001844011501
sciatic nerve 0.0038.881 gene 1 gene 14 genes 1 species 1 species UBERON:0001322111411
liver 0.2578.7610 genes 6 genes 0 gene
10 species 6 species UBERON:00021071060106
right testis 1.0091.651 gene 0 gene
15 genes 1 species 0 species
UBERON:0004534101510
adrenal cortex 1.0075.402 genes 0 gene
14 genes 2 species 0 species
UBERON:0001235201420
retinal neural layer -1.0013.600 gene
1 gene 15 genes 0 species
1 species UBERON:0003902011501
yolk sac -1.0029.220 gene
1 gene 15 genes 0 species
1 species UBERON:0001040011501
small intestine 1.0085.255 genes 0 gene
11 genes 5 species 0 species
UBERON:0002108501150
tongue 0.3376.262 genes 1 gene 13 genes 2 species 1 species UBERON:0001723211321
metanephric mesenchyme -1.0039.960 gene
1 gene 15 genes 0 species
1 species UBERON:0003220011501
zygote 1.0058.931 gene 0 gene
15 genes 1 species 0 species
CL:0000365101510
peritoneum 1.0075.391 gene 0 gene
15 genes 1 species 0 species
UBERON:0002358101510
cerebellar cortex 0.0088.542 genes 2 genes 12 genes 2 species 2 species UBERON:0002129221222
submandibular gland -1.0044.900 gene
1 gene 15 genes 0 species
1 species UBERON:0001736011501
pancreas 1.0074.364 genes 0 gene
12 genes 4 species 0 species
UBERON:0001264401240
bronchial epithelial cell 1.0074.111 gene 0 gene
15 genes 1 species 0 species
CL:0002328101510
metanephros cortex 0.0029.881 gene 1 gene 14 genes 1 species 1 species UBERON:0010533111411
cleaving embryo -1.0043.410 gene
1 gene 15 genes 0 species
1 species UBERON:0007010011501
heart right ventricle 0.3394.732 genes 1 gene 13 genes 2 species 1 species UBERON:0002080211321
ileum 0.2046.913 genes 2 genes 11 genes 3 species 2 species UBERON:0002116321132
pylorus 1.0072.611 gene 0 gene
15 genes 1 species 0 species
UBERON:0001166101510
telencephalon 1.0039.158 genes 0 gene
8 genes 8 species 0 species
UBERON:000189380880
cartilage tissue 1.0065.782 genes 0 gene
14 genes 2 species 0 species
UBERON:0002418201420
mammary duct 1.0070.511 gene 0 gene
15 genes 1 species 0 species
UBERON:0001765101510
cornea -1.0038.570 gene
1 gene 15 genes 0 species
1 species UBERON:0000964011501
oviduct shell gland, uterus -0.2075.952 genes 3 genes 11 genes 2 species 3 species UBERON:0008975, UBERON:0000995231123
hindbrain 0.6025.064 genes 1 gene 11 genes 4 species 1 species UBERON:0002028411141
left testis 1.0092.431 gene 0 gene
15 genes 1 species 0 species
UBERON:0004533101510
iris -1.0038.860 gene
1 gene 15 genes 0 species
1 species UBERON:0001769011501
gingival epithelium 1.0082.101 gene 0 gene
15 genes 1 species 0 species
UBERON:0001949101510
tongue muscle -1.0012.560 gene
1 gene 15 genes 0 species
1 species UBERON:0000378011501
central nervous system 1.0037.2710 genes 0 gene
6 genes 10 species 0 species
UBERON:00010171006100
saccule of membranous labyrinth -1.0047.220 gene
1 gene 15 genes 0 species
1 species UBERON:0001854011501
heart left ventricle -0.2091.972 genes 3 genes 11 genes 2 species 3 species UBERON:0002084231123
left lobe of thyroid gland 1.0081.561 gene 0 gene
15 genes 1 species 0 species
UBERON:0001120101510
blood 0.4388.545 genes 2 genes 9 genes 5 species 2 species UBERON:000017852952
upper leg skin 1.0084.701 gene 0 gene
15 genes 1 species 0 species
UBERON:0004262101510
lip -1.0012.270 gene
1 gene 15 genes 0 species
1 species UBERON:0001833011501
islet of Langerhans 1.0090.562 genes 0 gene
14 genes 2 species 0 species
UBERON:0000006201420
outflow tract 0.0033.451 gene 1 gene 14 genes 1 species 1 species UBERON:0004145111411
dermis -1.0038.570 gene
1 gene 15 genes 0 species
1 species UBERON:0002067011501
dentate gyrus of hippocampal formation -1.0041.230 gene
1 gene 15 genes 0 species
1 species UBERON:0001885011501
carotid body -1.0034.650 gene
1 gene 15 genes 0 species
1 species UBERON:0001629011501
neocortex 1.0074.248 genes 0 gene
8 genes 8 species 0 species
UBERON:000195080880
Ammon's horn 0.0086.192 genes 2 genes 12 genes 2 species 2 species UBERON:0001954221222
cerebellum -0.3379.694 genes 8 genes 4 genes 4 species 8 species UBERON:000203748448
endocardial endothelium -1.0016.610 gene
1 gene 15 genes 0 species
1 species UBERON:0005316011501
lens of camera-type eye -1.0028.890 gene
1 gene 15 genes 0 species
1 species UBERON:0000965011501
semi-lunar valve -1.0037.770 gene
1 gene 15 genes 0 species
1 species UBERON:0005623011501
somite -1.0041.230 gene
1 gene 15 genes 0 species
1 species UBERON:0002329011501
oviduct epithelium 0.0079.701 gene 1 gene 14 genes 1 species 1 species UBERON:0004804111411
choroid plexus epithelium -1.0039.040 gene
1 gene 15 genes 0 species
1 species UBERON:0003911011501
esophagus 0.5085.123 genes 1 gene 12 genes 3 species 1 species UBERON:0001043311231
brain 0.6782.9410 genes 2 genes 4 genes 10 species 2 species UBERON:00009551024102
cardiac ventricle 1.0078.913 genes 0 gene
13 genes 3 species 0 species
UBERON:0002082301330
brainstem 0.0038.792 genes 2 genes 12 genes 2 species 2 species UBERON:0002298221222
caecum -0.3376.341 gene 2 genes 13 genes 1 species 2 species UBERON:0001153121312
trigeminal ganglion 0.0082.511 gene 1 gene 14 genes 1 species 1 species UBERON:0001675111411
olfactory bulb 0.0045.641 gene 1 gene 14 genes 1 species 1 species UBERON:0002264111411
pineal body -1.0040.470 gene
1 gene 15 genes 0 species
1 species UBERON:0001905011501
cerebral cortex 0.7879.278 genes 1 gene 7 genes 8 species 1 species UBERON:000095681781
ureter 0.0040.731 gene 1 gene 14 genes 1 species 1 species UBERON:0000056111411
manus -1.0040.660 gene
1 gene 15 genes 0 species
1 species UBERON:0002398011501
olfactory lobe 0.3357.982 genes 1 gene 13 genes 2 species 1 species UBERON:0005366211321
epiblast (generic) 1.0044.531 gene 0 gene
15 genes 1 species 0 species
UBERON:0002532101510

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