We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0041.271 gene 0 gene
20 genes 1 species 0 species
UBERON:0002206102010
chordate pharynx 0.3357.882 genes 1 gene 18 genes 2 species 1 species UBERON:0001042211821
optic fissure -1.0040.620 gene
1 gene 20 genes 0 species
1 species UBERON:0005412012001
postcranial axial skeleton -1.0053.710 gene
1 gene 20 genes 0 species
1 species UBERON:0002090012001
epithelial cell of pancreas 1.0079.521 gene 0 gene
20 genes 1 species 0 species
CL:0000083102010
semi-lunar valve 1.0037.771 gene 0 gene
20 genes 1 species 0 species
UBERON:0005623102010
brain blood vessel 1.0067.651 gene 0 gene
20 genes 1 species 0 species
UBERON:0003499102010
hindlimb, pelvic fin 1.0054.976 genes 0 gene
15 genes 6 species 0 species
UBERON:0002103, UBERON:0000152601560
hypothalamus 1.0074.456 genes 0 gene
15 genes 6 species 0 species
UBERON:0001898601560
paraxial mesoderm -1.0044.810 gene
1 gene 20 genes 0 species
1 species UBERON:0003077012001
nervous system 1.0053.6818 genes 0 gene
3 genes 17 species 0 species
UBERON:00010161803170
gingival epithelium 1.0077.071 gene 0 gene
20 genes 1 species 0 species
UBERON:0001949102010
gastrula 1.0088.684 genes 0 gene
17 genes 3 species 0 species
UBERON:0004734401730
otic placode -1.0047.580 gene
1 gene 20 genes 0 species
1 species UBERON:0003069012001
cleaving embryo 1.0052.082 genes 0 gene
19 genes 2 species 0 species
UBERON:0007010201920
midbrain 1.0066.262 genes 0 gene
19 genes 2 species 0 species
UBERON:0001891201920
retinal neural layer 1.0070.941 gene 0 gene
20 genes 1 species 0 species
UBERON:0003902102010
cornea -1.0038.570 gene
1 gene 20 genes 0 species
1 species UBERON:0000964012001
hindbrain 1.0068.6413 genes 0 gene
8 genes 13 species 0 species
UBERON:00020281308130
cranial nerve II -1.0038.760 gene
1 gene 20 genes 0 species
1 species UBERON:0000941012001
stomach 0.6796.415 genes 1 gene 15 genes 5 species 1 species UBERON:0000945511551
pituitary gland 0.1472.904 genes 3 genes 14 genes 4 species 3 species UBERON:0000007431443
inferior vagus X ganglion 1.0067.531 gene 0 gene
20 genes 1 species 0 species
UBERON:0005363102010
female reproductive system 1.0069.9916 genes 0 gene
5 genes 15 species 0 species
UBERON:00004741605150
kidney epithelium 1.0080.462 genes 0 gene
19 genes 2 species 0 species
UBERON:0004819201920
pancreas 1.0088.034 genes 0 gene
17 genes 4 species 0 species
UBERON:0001264401740
upper leg skin 1.0076.871 gene 0 gene
20 genes 1 species 0 species
UBERON:0004262102010
extra-ocular muscle -1.0060.810 gene
1 gene 20 genes 0 species
1 species UBERON:0001601012001
limb, paired fin 1.0067.287 genes 0 gene
14 genes 7 species 0 species
UBERON:0002101, UBERON:0002534701470
manus, pectoral fin radial bone -1.0045.890 gene
1 gene 20 genes 0 species
1 species UBERON:0002398, UBERON:2001586012001
face 1.0060.708 genes 0 gene
13 genes 8 species 0 species
UBERON:0001456801380
blood vessel 1.0058.314 genes 0 gene
17 genes 4 species 0 species
UBERON:0001981401740
putamen 1.0081.591 gene 0 gene
20 genes 1 species 0 species
UBERON:0001874102010
telencephalon 1.0051.9615 genes 0 gene
6 genes 14 species 0 species
UBERON:00018931506140
utricle of membranous labyrinth 1.0052.481 gene 0 gene
20 genes 1 species 0 species
UBERON:0001853102010
eyeball of camera-type eye 1.0057.765 genes 0 gene
16 genes 5 species 0 species
UBERON:0010230501650
right ovary 1.0067.751 gene 0 gene
20 genes 1 species 0 species
UBERON:0002118102010
testis 0.5296.0316 genes 5 genes 0 gene
15 species 5 species UBERON:00004731650155
male reproductive system 1.0046.6818 genes 0 gene
3 genes 17 species 0 species
UBERON:00000791803170
autopod skin 0.0049.661 gene 1 gene 19 genes 1 species 1 species UBERON:0015790111911
multi-cellular organism 1.0062.1821 genes 0 gene
0 gene
19 species 0 species
UBERON:00004682100190
ventricular zone 0.0076.211 gene 1 gene 19 genes 1 species 1 species UBERON:0003053111911
skin epidermis 1.0043.242 genes 0 gene
19 genes 2 species 0 species
UBERON:0001003201920
embryonic post-anal tail 0.0075.011 gene 1 gene 19 genes 1 species 1 species UBERON:0007144111911
peripheral nervous system 1.0059.592 genes 0 gene
19 genes 2 species 0 species
UBERON:0000010201920
central nervous system 1.0037.2718 genes 0 gene
3 genes 17 species 0 species
UBERON:00010171803170
fibroblast 0.0061.692 genes 2 genes 17 genes 2 species 2 species CL:0000057221722
mesonephros 1.0033.114 genes 0 gene
17 genes 3 species 0 species
UBERON:0000080401730
iris 1.0038.861 gene 0 gene
20 genes 1 species 0 species
UBERON:0001769102010
head 1.0058.738 genes 0 gene
13 genes 8 species 0 species
UBERON:0000033801380
choroid plexus epithelium 1.0039.041 gene 0 gene
20 genes 1 species 0 species
UBERON:0003911102010
tongue muscle 1.0043.641 gene 0 gene
20 genes 1 species 0 species
UBERON:0000378102010
trigeminal ganglion 0.0065.701 gene 1 gene 19 genes 1 species 1 species UBERON:0001675111911
forebrain 1.0051.0315 genes 0 gene
6 genes 14 species 0 species
UBERON:00018901506140
vertebral column -1.0046.040 gene
1 gene 20 genes 0 species
1 species UBERON:0001130012001
caecum 1.0081.133 genes 0 gene
18 genes 3 species 0 species
UBERON:0001153301830
diencephalon 1.0072.346 genes 0 gene
15 genes 6 species 0 species
UBERON:0001894601560
heart left ventricle, primary heart field 0.2056.723 genes 2 genes 16 genes 3 species 2 species UBERON:0002084, UBERON:0004140321632
olfactory bulb 1.0052.642 genes 0 gene
19 genes 2 species 0 species
UBERON:0002264201920
lens of camera-type eye 1.0063.181 gene 0 gene
20 genes 1 species 0 species
UBERON:0000965102010
ear 1.0055.932 genes 0 gene
19 genes 2 species 0 species
UBERON:0001690201920
brain 0.7179.7018 genes 3 genes 0 gene
17 species 3 species UBERON:00009551830173
collection of basal ganglia 1.0055.542 genes 0 gene
19 genes 2 species 0 species
UBERON:0010011201920
smooth muscle tissue 0.5065.233 genes 1 gene 17 genes 3 species 1 species UBERON:0001135311731
upper arm skin 1.0095.461 gene 0 gene
20 genes 1 species 0 species
UBERON:0004263102010
heart right ventricle -0.3367.801 gene 2 genes 18 genes 1 species 2 species UBERON:0002080121812
lip 1.0093.491 gene 0 gene
20 genes 1 species 0 species
UBERON:0001833102010
gonad 1.0061.5219 genes 0 gene
2 genes 18 species 0 species
UBERON:00009911902180
skin of hip -1.0064.810 gene
1 gene 20 genes 0 species
1 species UBERON:0001554012001
female gonad 0.6096.8312 genes 3 genes 6 genes 12 species 3 species UBERON:00009921236123
internal ear 1.0084.491 gene 0 gene
20 genes 1 species 0 species
UBERON:0001846102010
ileum 0.6796.485 genes 1 gene 15 genes 5 species 1 species UBERON:0002116511551
mitral valve 1.0029.401 gene 0 gene
20 genes 1 species 0 species
UBERON:0002135102010
cartilage tissue 1.0070.533 genes 0 gene
18 genes 3 species 0 species
UBERON:0002418301830
blastopore, primitive streak -1.0040.630 gene
1 gene 20 genes 0 species
1 species UBERON:0000100, UBERON:0004341012001
thyroid gland 0.6091.814 genes 1 gene 16 genes 4 species 1 species UBERON:0002046411641
adenohypophysis 1.0073.932 genes 0 gene
19 genes 2 species 0 species
UBERON:0002196201920
midbrain tegmentum 1.0060.852 genes 0 gene
19 genes 2 species 0 species
UBERON:0001943201920
choroid plexus of fourth ventricle -1.0063.020 gene
1 gene 20 genes 0 species
1 species UBERON:0002290012001
larva 1.0053.561 gene 0 gene
20 genes 1 species 0 species
UBERON:0002548102010
bone element 1.0048.185 genes 0 gene
16 genes 5 species 0 species
UBERON:0001474501650
cerebellum 0.8681.0513 genes 1 gene 7 genes 13 species 1 species UBERON:00020371317131
fundus of stomach 1.0077.841 gene 0 gene
20 genes 1 species 0 species
UBERON:0001160102010
pineal body -1.0040.470 gene
1 gene 20 genes 0 species
1 species UBERON:0001905012001
dermis -1.0038.570 gene
1 gene 20 genes 0 species
1 species UBERON:0002067012001
cardiac ventricle 0.5069.923 genes 1 gene 17 genes 3 species 1 species UBERON:0002082311731
outflow tract 1.0043.822 genes 0 gene
19 genes 2 species 0 species
UBERON:0004145201920
saccule of membranous labyrinth -1.0047.220 gene
1 gene 20 genes 0 species
1 species UBERON:0001854012001
camera-type eye 1.0040.006 genes 0 gene
15 genes 6 species 0 species
UBERON:0000019601560
caudal tuberculum, substantia nigra 1.0077.452 genes 0 gene
19 genes 2 species 0 species
UBERON:2000633, UBERON:0002038201920
choroid plexus 0.0058.101 gene 1 gene 19 genes 1 species 1 species UBERON:0001886111911
thymus 0.2093.893 genes 2 genes 16 genes 3 species 2 species UBERON:0002370321632
forelimb, pectoral fin 0.0070.821 gene 1 gene 19 genes 1 species 1 species UBERON:0002102, UBERON:0000151111911
tendon 1.0074.681 gene 0 gene
20 genes 1 species 0 species
UBERON:0000043102010
motor neuron -1.0062.510 gene
1 gene 20 genes 0 species
1 species CL:0000100012001
olfactory cortex 0.0056.241 gene 1 gene 19 genes 1 species 1 species UBERON:0002894111911
epithelium of lens -1.0039.680 gene
1 gene 20 genes 0 species
1 species UBERON:0001803012001
right cardiac atrium 0.0025.511 gene 1 gene 19 genes 1 species 1 species UBERON:0002078111911
internal carotid artery -1.0040.890 gene
1 gene 20 genes 0 species
1 species UBERON:0001532012001
1st arch mandibular component -1.0041.150 gene
1 gene 20 genes 0 species
1 species UBERON:0007237012001
endocardial endothelium -1.0027.220 gene
1 gene 20 genes 0 species
1 species UBERON:0005316012001
calcareous tooth -1.0063.140 gene
1 gene 20 genes 0 species
1 species UBERON:0001091012001
Ammon's horn 1.0071.664 genes 0 gene
17 genes 4 species 0 species
UBERON:0001954401740
epiblast (generic) 1.0061.501 gene 0 gene
20 genes 1 species 0 species
UBERON:0002532102010
adrenal cortex 1.0066.062 genes 0 gene
19 genes 2 species 0 species
UBERON:0001235201920
sternocleidomastoid -1.0030.880 gene
1 gene 20 genes 0 species
1 species UBERON:0001128012001
brainstem 0.2056.913 genes 2 genes 16 genes 3 species 2 species UBERON:0002298321632
aorta 0.6067.014 genes 1 gene 16 genes 4 species 1 species UBERON:0000947411641
right kidney 1.0097.261 gene 0 gene
20 genes 1 species 0 species
UBERON:0004539102010
somite -1.0044.750 gene
2 genes 19 genes 0 species
2 species UBERON:0002329021902
retina 1.0052.974 genes 0 gene
17 genes 4 species 0 species
UBERON:0000966401740
intestine 1.0096.519 genes 0 gene
12 genes 9 species 0 species
UBERON:0000160901290
esophagus 1.0093.014 genes 0 gene
17 genes 4 species 0 species
UBERON:0001043401740
myocardium 1.0076.171 gene 0 gene
20 genes 1 species 0 species
UBERON:0002349102010
blastula 1.0085.655 genes 0 gene
16 genes 4 species 0 species
UBERON:0000307501640
right testis 1.0059.181 gene 0 gene
20 genes 1 species 0 species
UBERON:0004534102010
blood 0.3366.386 genes 3 genes 12 genes 6 species 3 species UBERON:0000178631263
adipose tissue 1.0060.836 genes 0 gene
15 genes 6 species 0 species
UBERON:0001013601560
embryonic head 1.0034.971 gene 0 gene
20 genes 1 species 0 species
UBERON:0008816102010
skeletal muscle tissue 0.0066.287 genes 7 genes 7 genes 7 species 6 species UBERON:000113477776
integumental system 1.0055.1413 genes 0 gene
8 genes 12 species 0 species
UBERON:00024161308120
cardiovascular system 1.0055.1412 genes 0 gene
9 genes 12 species 0 species
UBERON:00045351209120
spleen 0.6463.849 genes 2 genes 10 genes 9 species 2 species UBERON:0002106921092
kidney 1.0097.6821 genes 0 gene
0 gene
19 species 0 species
UBERON:00021132100190
intestinal epithelium 1.0096.651 gene 0 gene
20 genes 1 species 0 species
UBERON:0001277102010
pericardium 1.0069.042 genes 0 gene
19 genes 2 species 0 species
UBERON:0002407201920
lung, swim bladder 0.5795.9311 genes 3 genes 7 genes 11 species 3 species UBERON:0002048, UBERON:00068601137113
cardiac atrium 0.5064.933 genes 1 gene 17 genes 3 species 1 species UBERON:0002081311731
ventral horn of spinal cord 1.0052.591 gene 0 gene
20 genes 1 species 0 species
UBERON:0002257102010
islet of Langerhans 1.0070.732 genes 0 gene
19 genes 2 species 0 species
UBERON:0000006201920
neural tube 1.0069.642 genes 0 gene
19 genes 2 species 0 species
UBERON:0001049201920
endocardial cushion -1.0039.650 gene
1 gene 20 genes 0 species
1 species UBERON:0002062012001
cerebral hemisphere 1.0045.6515 genes 0 gene
6 genes 14 species 0 species
UBERON:00018691506140
appendicular skeleton -1.0063.630 gene
1 gene 20 genes 0 species
1 species UBERON:0002091012001
pigmented layer of retina -1.0055.740 gene
2 genes 19 genes 0 species
2 species UBERON:0001782021902
1st arch maxillary component -1.0041.060 gene
1 gene 20 genes 0 species
1 species UBERON:0007238012001
cerebellar cortex 1.0091.864 genes 0 gene
17 genes 4 species 0 species
UBERON:0002129401740
cranial ganglion 0.0069.211 gene 1 gene 19 genes 1 species 1 species UBERON:0001714111911
heart 0.1653.3711 genes 8 genes 2 genes 11 species 8 species UBERON:00009481182118
liver 0.6269.1517 genes 4 genes 0 gene
17 species 4 species UBERON:00021071740174
cranium 1.0053.531 gene 0 gene
20 genes 1 species 0 species
UBERON:0003128102010
ileal epithelium 1.0093.621 gene 0 gene
20 genes 1 species 0 species
UBERON:0008345102010
colon 0.7896.808 genes 1 gene 12 genes 8 species 1 species UBERON:0001155811281
left testis 1.0060.571 gene 0 gene
20 genes 1 species 0 species
UBERON:0004533102010
muscle organ 1.0058.6812 genes 0 gene
9 genes 12 species 0 species
UBERON:00016301209120
striatum 1.0047.092 genes 0 gene
19 genes 2 species 0 species
UBERON:0002435201920
myocardium of ventricle -1.0039.700 gene
1 gene 20 genes 0 species
1 species UBERON:0001083012001
neurohypophysis 1.0050.781 gene 0 gene
20 genes 1 species 0 species
UBERON:0002198102010
presomitic mesoderm -1.0044.380 gene
2 genes 19 genes 0 species
2 species UBERON:0003059021902
olfactory epithelium -1.0043.800 gene
1 gene 20 genes 0 species
1 species UBERON:0001997012001
meninx -1.0063.140 gene
1 gene 20 genes 0 species
1 species UBERON:0002360012001
dorsal root ganglion 0.0065.041 gene 1 gene 19 genes 1 species 1 species UBERON:0000044111911
aortic valve 1.0051.741 gene 0 gene
20 genes 1 species 0 species
UBERON:0002137102010
ciliary body -1.0037.490 gene
1 gene 20 genes 0 species
1 species UBERON:0001775012001
ear vesicle -1.0045.560 gene
1 gene 20 genes 0 species
1 species UBERON:0003051012001
musculature 1.0065.3812 genes 0 gene
9 genes 12 species 0 species
UBERON:00010151209120
gall bladder 1.0081.133 genes 0 gene
18 genes 3 species 0 species
UBERON:0002110301830
atrioventricular valve 0.0039.641 gene 1 gene 19 genes 1 species 1 species UBERON:0002133111911
parathyroid gland, pharyngeal gill 1.0084.871 gene 0 gene
20 genes 1 species 0 species
UBERON:0001132, UBERON:0000206102010
renal system 1.0075.3220 genes 0 gene
1 gene 18 species 0 species
UBERON:00010082001180
gingiva 1.0070.951 gene 0 gene
20 genes 1 species 0 species
UBERON:0001828102010
peritoneum 1.0070.311 gene 0 gene
20 genes 1 species 0 species
UBERON:0002358102010
zygote 1.0064.851 gene 0 gene
20 genes 1 species 0 species
CL:0000365102010
respiratory system 1.0055.5312 genes 0 gene
9 genes 12 species 0 species
UBERON:00010041209120
medulla oblongata 0.3367.202 genes 1 gene 18 genes 2 species 1 species UBERON:0001896211821
pylorus 1.0072.942 genes 0 gene
19 genes 2 species 0 species
UBERON:0001166201920
caudate nucleus 1.0080.541 gene 0 gene
20 genes 1 species 0 species
UBERON:0001873102010
embryo 0.8270.0710 genes 1 gene 10 genes 9 species 1 species UBERON:00009221011091
left ovary 1.0068.131 gene 0 gene
20 genes 1 species 0 species
UBERON:0002119102010

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