We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 9 genes 0 species
1 species UBERON:000220601901
optic fissure -1.0042.400 gene
1 gene 9 genes 0 species
1 species UBERON:000541201901
semi-lunar valve 1.0037.771 gene 0 gene
9 genes 1 species 0 species
UBERON:000562310910
brain blood vessel -1.0039.180 gene
1 gene 9 genes 0 species
1 species UBERON:000349901901
hypothalamus -0.3343.171 gene 2 genes 7 genes 1 species 2 species UBERON:000189812712
gastrula 0.3348.892 genes 1 gene 7 genes 2 species 1 species UBERON:000473421721
cleaving embryo 1.0072.941 gene 0 gene
9 genes 1 species 0 species
UBERON:000701010910
retinal neural layer 1.0068.721 gene 0 gene
9 genes 1 species 0 species
UBERON:000390210910
midbrain 1.0043.161 gene 0 gene
9 genes 1 species 0 species
UBERON:000189110910
cornea -1.0039.610 gene
1 gene 9 genes 0 species
1 species UBERON:000096401901
hindbrain 1.0043.423 genes 0 gene
7 genes 3 species 0 species
UBERON:000202830730
stomach -0.3334.861 gene 2 genes 7 genes 1 species 2 species UBERON:000094512712
pituitary gland -0.3346.561 gene 2 genes 7 genes 1 species 2 species UBERON:000000712712
pancreas 0.0038.781 gene 1 gene 8 genes 1 species 1 species UBERON:000126411811
extra-ocular muscle -1.0046.840 gene
1 gene 9 genes 0 species
1 species UBERON:000160101901
limb, paired fin 1.0043.591 gene 0 gene
9 genes 1 species 0 species
UBERON:0002101, UBERON:000253410910
manus, pectoral fin radial bone -1.0055.320 gene
1 gene 9 genes 0 species
1 species UBERON:0002398, UBERON:200158601901
telencephalon 1.0048.044 genes 0 gene
6 genes 4 species 0 species
UBERON:000189340640
utricle of membranous labyrinth 1.0066.101 gene 0 gene
9 genes 1 species 0 species
UBERON:000185310910
eyeball of camera-type eye 0.0038.601 gene 1 gene 8 genes 1 species 1 species UBERON:001023011811
male reproductive system 1.0048.549 genes 0 gene
1 gene 9 species 0 species
UBERON:000007990190
testis 0.8094.779 genes 1 gene 0 gene
9 species 1 species UBERON:000047391091
multi-cellular organism 1.0033.9910 genes 0 gene
0 gene
10 species 0 species
UBERON:00004681000100
ventricular zone 1.0068.121 gene 0 gene
9 genes 1 species 0 species
UBERON:000305310910
skin epidermis -1.0038.630 gene
1 gene 9 genes 0 species
1 species UBERON:000100301901
embryonic post-anal tail -1.0018.060 gene
1 gene 9 genes 0 species
1 species UBERON:000714401901
central nervous system 1.0037.296 genes 0 gene
4 genes 6 species 0 species
UBERON:000101760460
fibroblast 0.0046.601 gene 1 gene 8 genes 1 species 1 species CL:000005711811
mesonephros 0.0013.421 gene 1 gene 8 genes 1 species 1 species UBERON:000008011811
iris -1.0038.860 gene
1 gene 9 genes 0 species
1 species UBERON:000176901901
head 1.0039.132 genes 0 gene
8 genes 2 species 0 species
UBERON:000003320820
choroid plexus epithelium -1.0039.040 gene
1 gene 9 genes 0 species
1 species UBERON:000391101901
tongue muscle -1.0012.560 gene
1 gene 9 genes 0 species
1 species UBERON:000037801901
trigeminal ganglion -1.0039.050 gene
1 gene 9 genes 0 species
1 species UBERON:000167501901
forebrain 1.0045.354 genes 0 gene
6 genes 4 species 0 species
UBERON:000189040640
vertebral column -1.0046.040 gene
1 gene 9 genes 0 species
1 species UBERON:000113001901
caecum -1.0011.870 gene
2 genes 8 genes 0 species
2 species UBERON:000115302802
heart left ventricle, primary heart field 0.0052.741 gene 1 gene 8 genes 1 species 1 species UBERON:0002084, UBERON:000414011811
olfactory bulb 1.0044.451 gene 0 gene
9 genes 1 species 0 species
UBERON:000226410910
lens of camera-type eye 1.0048.191 gene 0 gene
9 genes 1 species 0 species
UBERON:000096510910
ear 1.0063.561 gene 0 gene
9 genes 1 species 0 species
UBERON:000169010910
brain 0.3342.786 genes 3 genes 1 gene 6 species 3 species UBERON:000095563163
lip 1.0045.591 gene 0 gene
9 genes 1 species 0 species
UBERON:000183310910
female gonad 0.2554.045 genes 3 genes 2 genes 5 species 3 species UBERON:000099253253
ileum -1.0035.080 gene
4 genes 6 genes 0 species
4 species UBERON:000211604604
blastopore, primitive streak -1.0040.630 gene
1 gene 9 genes 0 species
1 species UBERON:0000100, UBERON:000434101901
thyroid gland -1.007.600 gene
1 gene 9 genes 0 species
1 species UBERON:000204601901
adenohypophysis -1.009.640 gene
1 gene 9 genes 0 species
1 species UBERON:000219601901
larva 1.0026.041 gene 0 gene
9 genes 1 species 0 species
UBERON:000254810910
bone element 1.0045.072 genes 0 gene
8 genes 2 species 0 species
UBERON:000147420820
cerebellum -0.1457.643 genes 4 genes 3 genes 3 species 4 species UBERON:000203734334
dermis -1.0038.570 gene
1 gene 9 genes 0 species
1 species UBERON:000206701901
pineal body -1.0040.470 gene
1 gene 9 genes 0 species
1 species UBERON:000190501901
outflow tract 1.0049.991 gene 0 gene
9 genes 1 species 0 species
UBERON:000414510910
cardiac ventricle 1.0045.431 gene 0 gene
9 genes 1 species 0 species
UBERON:000208210910
caudal tuberculum, substantia nigra -1.0040.070 gene
1 gene 9 genes 0 species
1 species UBERON:2000633, UBERON:000203801901
camera-type eye 1.0042.201 gene 0 gene
9 genes 1 species 0 species
UBERON:000001910910
choroid plexus -1.0023.420 gene
1 gene 9 genes 0 species
1 species UBERON:000188601901
thymus 0.0047.131 gene 1 gene 8 genes 1 species 1 species UBERON:000237011811
epithelium of lens -1.0039.680 gene
1 gene 9 genes 0 species
1 species UBERON:000180301901
internal carotid artery -1.0058.350 gene
1 gene 9 genes 0 species
1 species UBERON:000153201901
1st arch mandibular component -1.0041.150 gene
1 gene 9 genes 0 species
1 species UBERON:000723701901
endocardial endothelium -1.0026.640 gene
1 gene 9 genes 0 species
1 species UBERON:000531601901
Ammon's horn 0.3349.142 genes 1 gene 7 genes 2 species 1 species UBERON:000195421721
epiblast (generic) -1.0041.970 gene
1 gene 9 genes 0 species
1 species UBERON:000253201901
sternocleidomastoid -1.0049.680 gene
1 gene 9 genes 0 species
1 species UBERON:000112801901
brainstem -1.0038.790 gene
3 genes 7 genes 0 species
3 species UBERON:000229803703
retina -0.3338.651 gene 2 genes 7 genes 1 species 2 species UBERON:000096612712
aorta 0.0062.361 gene 1 gene 8 genes 1 species 1 species UBERON:000094711811
right kidney -1.0025.190 gene
1 gene 9 genes 0 species
1 species UBERON:000453901901
intestine 0.0040.551 gene 1 gene 8 genes 1 species 1 species UBERON:000016011811
esophagus -0.3355.271 gene 2 genes 7 genes 1 species 2 species UBERON:000104312712
blastula 0.0019.282 genes 2 genes 6 genes 2 species 2 species UBERON:000030722622
blood -0.2056.862 genes 3 genes 5 genes 2 species 3 species UBERON:000017823523
adipose tissue 0.3339.102 genes 1 gene 7 genes 2 species 1 species UBERON:000101321721
embryonic head -1.001.750 gene
1 gene 9 genes 0 species
1 species UBERON:000881601901
skeletal muscle tissue -0.6747.681 gene 5 genes 4 genes 1 species 5 species UBERON:000113415415
spleen -0.6748.371 gene 5 genes 4 genes 1 species 5 species UBERON:000210615415
kidney 0.0043.003 genes 3 genes 4 genes 3 species 3 species UBERON:000211333433
lung, swim bladder 0.3345.984 genes 2 genes 4 genes 4 species 2 species UBERON:0002048, UBERON:000686042442
cardiac atrium -1.0042.740 gene
2 genes 8 genes 0 species
2 species UBERON:000208102802
islet of Langerhans 1.0040.011 gene 0 gene
9 genes 1 species 0 species
UBERON:000000610910
ventral horn of spinal cord -1.0038.710 gene
1 gene 9 genes 0 species
1 species UBERON:000225701901
neural tube 1.0041.531 gene 0 gene
9 genes 1 species 0 species
UBERON:000104910910
endocardial cushion -1.0039.650 gene
1 gene 9 genes 0 species
1 species UBERON:000206201901
cerebral hemisphere 1.0048.374 genes 0 gene
6 genes 4 species 0 species
UBERON:000186940640
pigmented layer of retina -1.0037.830 gene
1 gene 9 genes 0 species
1 species UBERON:000178201901
1st arch maxillary component -1.0041.060 gene
1 gene 9 genes 0 species
1 species UBERON:000723801901
cerebellar cortex 1.0035.891 gene 0 gene
9 genes 1 species 0 species
UBERON:000212910910
heart -0.5040.582 genes 6 genes 2 genes 2 species 6 species UBERON:000094826226
liver -0.8042.241 gene 9 genes 0 gene
1 species 9 species UBERON:000210719019
colon -0.5038.761 gene 3 genes 6 genes 1 species 3 species UBERON:000115513613
muscle organ 0.3331.362 genes 1 gene 7 genes 2 species 1 species UBERON:000163021721
striatum 1.0042.751 gene 0 gene
9 genes 1 species 0 species
UBERON:000243510910
myocardium of ventricle -1.0052.840 gene
1 gene 9 genes 0 species
1 species UBERON:000108301901
neurohypophysis -1.009.580 gene
1 gene 9 genes 0 species
1 species UBERON:000219801901
presomitic mesoderm -1.0041.430 gene
1 gene 9 genes 0 species
1 species UBERON:000305901901
olfactory epithelium 1.0054.521 gene 0 gene
9 genes 1 species 0 species
UBERON:000199710910
dorsal root ganglion 1.0038.091 gene 0 gene
9 genes 1 species 0 species
UBERON:000004410910
aortic valve 1.0061.951 gene 0 gene
9 genes 1 species 0 species
UBERON:000213710910
ciliary body -1.0037.490 gene
1 gene 9 genes 0 species
1 species UBERON:000177501901
ear vesicle -1.0039.800 gene
1 gene 9 genes 0 species
1 species UBERON:000305101901
gall bladder -1.008.670 gene
1 gene 9 genes 0 species
1 species UBERON:000211001901
atrioventricular valve -1.0039.640 gene
1 gene 9 genes 0 species
1 species UBERON:000213301901
parathyroid gland, pharyngeal gill -1.0011.080 gene
1 gene 9 genes 0 species
1 species UBERON:0001132, UBERON:000020601901
zygote 1.0080.711 gene 0 gene
9 genes 1 species 0 species
CL:000036510910
medulla oblongata -1.005.600 gene
1 gene 9 genes 0 species
1 species UBERON:000189601901
embryo 0.6741.395 genes 1 gene 4 genes 5 species 1 species UBERON:000092251451

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