We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0081.231 gene 0 gene
10 genes 1 species 0 species
UBERON:0002206101010
forelimb mesenchyme, mesenchyme pectoral fin 1.0056.241 gene 0 gene
10 genes 1 species 0 species
UBERON:0003859, UBERON:0003934101010
optic fissure 1.0073.451 gene 0 gene
10 genes 1 species 0 species
UBERON:0005412101010
semi-lunar valve 1.0075.841 gene 0 gene
10 genes 1 species 0 species
UBERON:0005623101010
brain blood vessel 1.0062.281 gene 0 gene
10 genes 1 species 0 species
UBERON:0003499101010
hypothalamus 1.0090.882 genes 0 gene
9 genes 2 species 0 species
UBERON:000189820920
gastrula 1.0097.083 genes 0 gene
8 genes 3 species 0 species
UBERON:000473430830
otic placode 1.0059.991 gene 0 gene
10 genes 1 species 0 species
UBERON:0003069101010
cleaving embryo 1.0056.501 gene 0 gene
10 genes 1 species 0 species
UBERON:0007010101010
retinal neural layer 1.0099.051 gene 0 gene
10 genes 1 species 0 species
UBERON:0003902101010
midbrain 1.0072.221 gene 0 gene
10 genes 1 species 0 species
UBERON:0001891101010
cornea 1.0067.451 gene 0 gene
10 genes 1 species 0 species
UBERON:0000964101010
hindbrain 1.0072.878 genes 0 gene
3 genes 8 species 0 species
UBERON:000202880380
cranial nerve II 1.0059.981 gene 0 gene
10 genes 1 species 0 species
UBERON:0000941101010
stomach 1.0095.192 genes 0 gene
9 genes 2 species 0 species
UBERON:000094520920
pituitary gland 1.0095.472 genes 0 gene
9 genes 2 species 0 species
UBERON:000000720920
pancreas 1.0091.532 genes 0 gene
9 genes 2 species 0 species
UBERON:000126420920
extra-ocular muscle 1.0085.681 gene 0 gene
10 genes 1 species 0 species
UBERON:0001601101010
limb, paired fin 1.0070.795 genes 0 gene
6 genes 5 species 0 species
UBERON:0002101, UBERON:000253450650
manus, pectoral fin radial bone 1.0069.031 gene 0 gene
10 genes 1 species 0 species
UBERON:0002398, UBERON:2001586101010
blood vessel 1.0058.312 genes 0 gene
9 genes 2 species 0 species
UBERON:000198120920
telencephalon 1.0072.186 genes 0 gene
5 genes 6 species 0 species
UBERON:000189360560
utricle of membranous labyrinth 1.0058.931 gene 0 gene
10 genes 1 species 0 species
UBERON:0001853101010
eyeball of camera-type eye 1.0084.002 genes 0 gene
9 genes 2 species 0 species
UBERON:001023020920
testis 1.0074.1811 genes 0 gene
0 gene
11 species 0 species
UBERON:00004731100110
male reproductive system 1.0085.0311 genes 0 gene
0 gene
11 species 0 species
UBERON:00000791100110
autopod skin 1.0084.631 gene 0 gene
10 genes 1 species 0 species
UBERON:0015790101010
multi-cellular organism 1.0095.1111 genes 0 gene
0 gene
11 species 0 species
UBERON:00004681100110
ventricular zone 1.0091.331 gene 0 gene
10 genes 1 species 0 species
UBERON:0003053101010
skin epidermis 1.0069.381 gene 0 gene
10 genes 1 species 0 species
UBERON:0001003101010
pharyngeal arch 1.0077.261 gene 0 gene
10 genes 1 species 0 species
UBERON:0002539101010
embryonic post-anal tail 1.0092.312 genes 0 gene
9 genes 2 species 0 species
UBERON:000714420920
pronephros 1.0054.641 gene 0 gene
10 genes 1 species 0 species
UBERON:0002120101010
central nervous system 1.0065.8911 genes 0 gene
0 gene
11 species 0 species
UBERON:00010171100110
fibroblast 1.0098.863 genes 0 gene
8 genes 3 species 0 species
CL:000005730830
mesonephros 1.0078.673 genes 0 gene
8 genes 3 species 0 species
UBERON:000008030830
iris 1.0084.821 gene 0 gene
10 genes 1 species 0 species
UBERON:0001769101010
head 1.0084.964 genes 0 gene
7 genes 4 species 0 species
UBERON:000003340740
choroid plexus epithelium 1.0078.361 gene 0 gene
10 genes 1 species 0 species
UBERON:0003911101010
trigeminal ganglion 1.0065.261 gene 0 gene
10 genes 1 species 0 species
UBERON:0001675101010
forebrain 1.0073.806 genes 0 gene
5 genes 6 species 0 species
UBERON:000189060560
olfactory bulb 1.0081.891 gene 0 gene
10 genes 1 species 0 species
UBERON:0002264101010
diencephalon 1.0074.972 genes 0 gene
9 genes 2 species 0 species
UBERON:000189420920
heart left ventricle, primary heart field 1.0096.462 genes 0 gene
9 genes 2 species 0 species
UBERON:0002084, UBERON:000414020920
lens of camera-type eye 1.0090.171 gene 0 gene
10 genes 1 species 0 species
UBERON:0000965101010
ear 1.0064.471 gene 0 gene
10 genes 1 species 0 species
UBERON:0001690101010
brain 1.0091.5211 genes 0 gene
0 gene
11 species 0 species
UBERON:00009551100110
smooth muscle tissue 1.0092.172 genes 0 gene
9 genes 2 species 0 species
UBERON:000113520920
lip 1.0095.661 gene 0 gene
10 genes 1 species 0 species
UBERON:0001833101010
heart right ventricle 1.0090.351 gene 0 gene
10 genes 1 species 0 species
UBERON:0002080101010
female gonad 1.0098.889 genes 0 gene
2 genes 9 species 0 species
UBERON:000099290290
ileum 1.0096.323 genes 0 gene
8 genes 3 species 0 species
UBERON:000211630830
blastopore, primitive streak 1.0066.171 gene 0 gene
10 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101010
thyroid gland 1.0097.101 gene 0 gene
10 genes 1 species 0 species
UBERON:0002046101010
choroid plexus of fourth ventricle 1.0081.041 gene 0 gene
10 genes 1 species 0 species
UBERON:0002290101010
larva 1.0071.031 gene 0 gene
10 genes 1 species 0 species
UBERON:0002548101010
bone element 1.0072.133 genes 0 gene
8 genes 3 species 0 species
UBERON:000147430830
cerebellum 1.0094.727 genes 0 gene
4 genes 7 species 0 species
UBERON:000203770470
pineal body 1.0076.141 gene 0 gene
10 genes 1 species 0 species
UBERON:0001905101010
dermis 1.0074.631 gene 0 gene
10 genes 1 species 0 species
UBERON:0002067101010
cardiac ventricle 1.0089.012 genes 0 gene
9 genes 2 species 0 species
UBERON:000208220920
outflow tract 1.0077.051 gene 0 gene
10 genes 1 species 0 species
UBERON:0004145101010
saccule of membranous labyrinth 1.0058.411 gene 0 gene
10 genes 1 species 0 species
UBERON:0001854101010
camera-type eye 1.0089.542 genes 0 gene
9 genes 2 species 0 species
UBERON:000001920920
caudal tuberculum, substantia nigra 1.0073.001 gene 0 gene
10 genes 1 species 0 species
UBERON:2000633, UBERON:0002038101010
thymus 1.0076.182 genes 0 gene
9 genes 2 species 0 species
UBERON:000237020920
brain meninx 1.0062.501 gene 0 gene
10 genes 1 species 0 species
UBERON:0003547101010
motor neuron -1.0072.170 gene
1 gene 10 genes 0 species
1 species CL:0000100011001
epithelium of lens 1.0066.851 gene 0 gene
10 genes 1 species 0 species
UBERON:0001803101010
internal carotid artery -1.0064.980 gene
1 gene 10 genes 0 species
1 species UBERON:0001532011001
1st arch mandibular component 1.0075.621 gene 0 gene
10 genes 1 species 0 species
UBERON:0007237101010
Ammon's horn 1.0085.323 genes 0 gene
8 genes 3 species 0 species
UBERON:000195430830
epiblast (generic) 1.0077.781 gene 0 gene
10 genes 1 species 0 species
UBERON:0002532101010
pronephric glomerulus 1.0068.171 gene 0 gene
10 genes 1 species 0 species
UBERON:0004739101010
sternocleidomastoid 1.0092.061 gene 0 gene
10 genes 1 species 0 species
UBERON:0001128101010
brainstem 1.0080.272 genes 0 gene
9 genes 2 species 0 species
UBERON:000229820920
aorta 1.0086.532 genes 0 gene
9 genes 2 species 0 species
UBERON:000094720920
right kidney 1.0095.711 gene 0 gene
10 genes 1 species 0 species
UBERON:0004539101010
retina 1.0083.842 genes 0 gene
9 genes 2 species 0 species
UBERON:000096620920
somite 1.0064.291 gene 0 gene
10 genes 1 species 0 species
UBERON:0002329101010
intestine 1.0087.865 genes 0 gene
6 genes 5 species 0 species
UBERON:000016050650
esophagus 1.0092.632 genes 0 gene
9 genes 2 species 0 species
UBERON:000104320920
choroid plexus of third ventricle 1.0050.001 gene 0 gene
10 genes 1 species 0 species
UBERON:0002288101010
blastula 0.0028.512 genes 2 genes 7 genes 2 species 2 species UBERON:000030722722
blood 1.0079.774 genes 0 gene
7 genes 4 species 0 species
UBERON:000017840740
adipose tissue 1.0098.762 genes 0 gene
9 genes 2 species 0 species
UBERON:000101320920
kidney blood vessel 1.0080.001 gene 0 gene
10 genes 1 species 0 species
UBERON:0003517101010
skeletal muscle tissue 1.0094.897 genes 0 gene
4 genes 7 species 0 species
UBERON:000113470470
spleen 1.0096.115 genes 0 gene
6 genes 5 species 0 species
UBERON:000210650650
kidney 1.0096.7311 genes 0 gene
0 gene
11 species 0 species
UBERON:00021131100110
blood vasculature 1.0053.313 genes 0 gene
8 genes 3 species 0 species
UBERON:000453730830
intestinal epithelium 1.0069.631 gene 0 gene
10 genes 1 species 0 species
UBERON:0001277101010
lung epithelium 1.0067.381 gene 0 gene
10 genes 1 species 0 species
UBERON:0000115101010
Meckel's cartilage 1.0057.701 gene 0 gene
10 genes 1 species 0 species
UBERON:0003107101010
endoderm 1.0078.331 gene 0 gene
10 genes 1 species 0 species
UBERON:0000925101010
lung, swim bladder 1.0099.217 genes 0 gene
4 genes 7 species 0 species
UBERON:0002048, UBERON:000686070470
cardiac atrium 1.0085.431 gene 0 gene
10 genes 1 species 0 species
UBERON:0002081101010
ventral horn of spinal cord 1.0069.921 gene 0 gene
10 genes 1 species 0 species
UBERON:0002257101010
islet of Langerhans 1.0096.181 gene 0 gene
10 genes 1 species 0 species
UBERON:0000006101010
neural tube 1.0067.691 gene 0 gene
10 genes 1 species 0 species
UBERON:0001049101010
endocardial cushion 1.0074.851 gene 0 gene
10 genes 1 species 0 species
UBERON:0002062101010
cerebral hemisphere 1.0074.246 genes 0 gene
5 genes 6 species 0 species
UBERON:000186960560
pigmented layer of retina 1.0093.161 gene 0 gene
10 genes 1 species 0 species
UBERON:0001782101010
1st arch maxillary component 1.0075.971 gene 0 gene
10 genes 1 species 0 species
UBERON:0007238101010
cerebellar cortex 1.0096.112 genes 0 gene
9 genes 2 species 0 species
UBERON:000212920920
heart 1.0097.5710 genes 0 gene
1 gene 10 species 0 species
UBERON:00009481001100
liver 1.0096.3911 genes 0 gene
0 gene
11 species 0 species
UBERON:00021071100110
ileal epithelium -1.0052.030 gene
1 gene 10 genes 0 species
1 species UBERON:0008345011001
colon 1.0083.234 genes 0 gene
7 genes 4 species 0 species
UBERON:000115540740
muscle organ 1.0094.879 genes 0 gene
2 genes 9 species 0 species
UBERON:000163090290
striatum 1.0078.331 gene 0 gene
10 genes 1 species 0 species
UBERON:0002435101010
myocardium of ventricle 1.0093.231 gene 0 gene
10 genes 1 species 0 species
UBERON:0001083101010
presomitic mesoderm 1.0069.911 gene 0 gene
10 genes 1 species 0 species
UBERON:0003059101010
olfactory epithelium 1.0061.851 gene 0 gene
10 genes 1 species 0 species
UBERON:0001997101010
dorsal root ganglion 1.0070.871 gene 0 gene
10 genes 1 species 0 species
UBERON:0000044101010
aortic valve 1.0082.261 gene 0 gene
10 genes 1 species 0 species
UBERON:0002137101010
ciliary body 1.0085.461 gene 0 gene
10 genes 1 species 0 species
UBERON:0001775101010
ear vesicle 1.0051.111 gene 0 gene
10 genes 1 species 0 species
UBERON:0003051101010
gall bladder -1.0061.280 gene
1 gene 10 genes 0 species
1 species UBERON:0002110011001
atrioventricular valve 1.0078.301 gene 0 gene
10 genes 1 species 0 species
UBERON:0002133101010
parathyroid gland, pharyngeal gill 1.0062.911 gene 0 gene
10 genes 1 species 0 species
UBERON:0001132, UBERON:0000206101010
zygote -1.0038.580 gene
1 gene 10 genes 0 species
1 species CL:0000365011001
choroid plexus of lateral ventricle 1.0052.171 gene 0 gene
10 genes 1 species 0 species
UBERON:0002307101010
medulla oblongata 1.0071.961 gene 0 gene
10 genes 1 species 0 species
UBERON:0001896101010
embryo 1.0085.306 genes 0 gene
5 genes 6 species 0 species
UBERON:000092260560
lung mesenchyme 1.0058.311 gene 0 gene
10 genes 1 species 0 species
UBERON:0004883101010

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