We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body 1.0078.561 gene 0 gene
17 genes 1 species 0 species
UBERON:0002206101710
vestibulocochlear ganglion 1.0068.731 gene 0 gene
17 genes 1 species 0 species
UBERON:0002827101710
optic fissure 1.0042.531 gene 0 gene
17 genes 1 species 0 species
UBERON:0005412101710
epithelial cell of pancreas -1.0062.110 gene
1 gene 17 genes 0 species
1 species CL:0000083011701
semi-lunar valve 1.0048.821 gene 0 gene
17 genes 1 species 0 species
UBERON:0005623101710
inferior olivary complex 1.0056.611 gene 0 gene
17 genes 1 species 0 species
UBERON:0002127101710
brain blood vessel 1.0039.181 gene 0 gene
17 genes 1 species 0 species
UBERON:0003499101710
hypothalamus 1.0081.376 genes 0 gene
12 genes 6 species 0 species
UBERON:0001898601260
gingival epithelium -1.0061.480 gene
1 gene 17 genes 0 species
1 species UBERON:0001949011701
gastrula -0.3349.651 gene 2 genes 15 genes 1 species 2 species UBERON:0004734121512
otic placode -1.0047.580 gene
1 gene 17 genes 0 species
1 species UBERON:0003069011701
cleaving embryo 1.0059.281 gene 0 gene
17 genes 1 species 0 species
UBERON:0007010101710
midbrain 1.0078.522 genes 0 gene
16 genes 2 species 0 species
UBERON:0001891201620
retinal neural layer 1.0077.511 gene 0 gene
17 genes 1 species 0 species
UBERON:0003902101710
cornea 1.0044.241 gene 0 gene
17 genes 1 species 0 species
UBERON:0000964101710
hindbrain 1.0082.2012 genes 0 gene
6 genes 12 species 0 species
UBERON:00020281206120
cranial nerve II 0.0062.631 gene 1 gene 16 genes 1 species 1 species UBERON:0000941111611
stomach 0.6759.495 genes 1 gene 12 genes 5 species 1 species UBERON:0000945511251
pituitary gland 0.7194.226 genes 1 gene 11 genes 6 species 1 species UBERON:0000007611161
inferior vagus X ganglion 1.0065.251 gene 0 gene
17 genes 1 species 0 species
UBERON:0005363101710
female reproductive system 1.0063.3212 genes 0 gene
6 genes 12 species 0 species
UBERON:00004741206120
epithelium of esophagus 1.0067.461 gene 0 gene
17 genes 1 species 0 species
UBERON:0001976101710
pancreas 1.0067.054 genes 0 gene
14 genes 4 species 0 species
UBERON:0001264401440
kidney epithelium 1.0066.192 genes 0 gene
16 genes 2 species 0 species
UBERON:0004819201620
upper leg skin -1.0060.860 gene
1 gene 17 genes 0 species
1 species UBERON:0004262011701
extra-ocular muscle -1.0038.470 gene
1 gene 17 genes 0 species
1 species UBERON:0001601011701
limb, paired fin 1.0066.697 genes 0 gene
11 genes 7 species 0 species
UBERON:0002101, UBERON:0002534701170
spinal cord mantle layer 1.0074.991 gene 0 gene
17 genes 1 species 0 species
UBERON:0009583101710
manus, pectoral fin radial bone -1.0046.240 gene
1 gene 17 genes 0 species
1 species UBERON:0002398, UBERON:2001586011701
optic choroid 1.0054.151 gene 0 gene
17 genes 1 species 0 species
UBERON:0001776101710
putamen 1.0080.101 gene 0 gene
17 genes 1 species 0 species
UBERON:0001874101710
telencephalon 1.0073.4314 genes 0 gene
4 genes 14 species 0 species
UBERON:00018931404140
utricle of membranous labyrinth 1.0053.691 gene 0 gene
17 genes 1 species 0 species
UBERON:0001853101710
eyeball of camera-type eye 1.0078.786 genes 0 gene
12 genes 6 species 0 species
UBERON:0010230601260
right ovary 1.0059.741 gene 0 gene
17 genes 1 species 0 species
UBERON:0002118101710
male reproductive system 1.0054.1317 genes 0 gene
1 gene 17 species 0 species
UBERON:00000791701170
testis 0.7867.0416 genes 2 genes 0 gene
16 species 2 species UBERON:00004731620162
autopod skin 1.0032.591 gene 0 gene
17 genes 1 species 0 species
UBERON:0015790101710
multi-cellular organism 1.0070.9618 genes 0 gene
0 gene
18 species 0 species
UBERON:00004681800180
ventricular zone 1.0073.722 genes 0 gene
16 genes 2 species 0 species
UBERON:0003053201620
skin epidermis 0.0045.091 gene 1 gene 16 genes 1 species 1 species UBERON:0001003111611
sympathetic ganglion 1.0076.581 gene 0 gene
17 genes 1 species 0 species
UBERON:0001806101710
embryonic post-anal tail 0.0059.741 gene 1 gene 16 genes 1 species 1 species UBERON:0007144111611
central nervous system 1.0072.4218 genes 0 gene
0 gene
18 species 0 species
UBERON:00010171800180
fibroblast -0.3336.581 gene 2 genes 15 genes 1 species 2 species CL:0000057121512
mesonephros 1.0072.843 genes 0 gene
15 genes 3 species 0 species
UBERON:0000080301530
iris 0.0050.601 gene 1 gene 16 genes 1 species 1 species UBERON:0001769111611
head 1.0055.508 genes 0 gene
10 genes 8 species 0 species
UBERON:0000033801080
choroid plexus epithelium 0.0052.281 gene 1 gene 16 genes 1 species 1 species UBERON:0003911111611
tongue muscle 1.0048.431 gene 0 gene
17 genes 1 species 0 species
UBERON:0000378101710
geniculate ganglion 1.0063.311 gene 0 gene
17 genes 1 species 0 species
UBERON:0001700101710
trigeminal ganglion 1.0073.622 genes 0 gene
16 genes 2 species 0 species
UBERON:0001675201620
forebrain 1.0069.6514 genes 0 gene
4 genes 14 species 0 species
UBERON:00018901404140
vertebral column -1.0046.040 gene
1 gene 17 genes 0 species
1 species UBERON:0001130011701
caecum 0.3363.642 genes 1 gene 15 genes 2 species 1 species UBERON:0001153211521
diencephalon 1.0080.257 genes 0 gene
11 genes 7 species 0 species
UBERON:0001894701170
heart left ventricle, primary heart field 0.6070.754 genes 1 gene 13 genes 4 species 1 species UBERON:0002084, UBERON:0004140411341
olfactory bulb 1.0093.813 genes 0 gene
15 genes 3 species 0 species
UBERON:0002264301530
lens of camera-type eye 1.0061.012 genes 0 gene
16 genes 2 species 0 species
UBERON:0000965201620
ear 1.0052.362 genes 0 gene
16 genes 2 species 0 species
UBERON:0001690201620
brain 1.0090.5618 genes 0 gene
0 gene
18 species 0 species
UBERON:00009551800180
male germ cell 1.0079.663 genes 0 gene
15 genes 3 species 0 species
CL:0000015301530
upper arm skin -1.0049.030 gene
1 gene 17 genes 0 species
1 species UBERON:0004263011701
smooth muscle tissue 1.0066.403 genes 0 gene
15 genes 3 species 0 species
UBERON:0001135301530
heart right ventricle 0.3359.672 genes 1 gene 15 genes 2 species 1 species UBERON:0002080211521
lip 1.0057.311 gene 0 gene
17 genes 1 species 0 species
UBERON:0001833101710
skin of hip -1.0050.640 gene
1 gene 17 genes 0 species
1 species UBERON:0001554011701
female gonad 0.6793.4210 genes 2 genes 6 genes 10 species 2 species UBERON:00009921026102
ileum 0.2049.593 genes 2 genes 13 genes 3 species 2 species UBERON:0002116321332
mitral valve 1.0042.181 gene 0 gene
17 genes 1 species 0 species
UBERON:0002135101710
cartilage tissue 1.0087.813 genes 0 gene
15 genes 3 species 0 species
UBERON:0002418301530
blastopore, primitive streak -1.0054.350 gene
1 gene 17 genes 0 species
1 species UBERON:0000100, UBERON:0004341011701
thyroid gland 1.0074.874 genes 0 gene
14 genes 4 species 0 species
UBERON:0002046401440
adenohypophysis 1.0079.532 genes 0 gene
16 genes 2 species 0 species
UBERON:0002196201620
larva 1.0030.811 gene 0 gene
17 genes 1 species 0 species
UBERON:0002548101710
bone element 1.0050.116 genes 0 gene
12 genes 6 species 0 species
UBERON:0001474601260
cerebellum 0.8579.8012 genes 1 gene 5 genes 12 species 1 species UBERON:00020371215121
fundus of stomach 1.0069.171 gene 0 gene
17 genes 1 species 0 species
UBERON:0001160101710
pineal body 1.0057.422 genes 0 gene
16 genes 2 species 0 species
UBERON:0001905201620
dermis 1.0048.831 gene 0 gene
17 genes 1 species 0 species
UBERON:0002067101710
cardiac ventricle 1.0063.294 genes 0 gene
14 genes 4 species 0 species
UBERON:0002082401440
outflow tract 1.0037.422 genes 0 gene
16 genes 2 species 0 species
UBERON:0004145201620
saccule of membranous labyrinth 1.0052.051 gene 0 gene
17 genes 1 species 0 species
UBERON:0001854101710
camera-type eye 1.0046.776 genes 0 gene
12 genes 6 species 0 species
UBERON:0000019601260
caudal tuberculum, substantia nigra 1.0079.112 genes 0 gene
16 genes 2 species 0 species
UBERON:2000633, UBERON:0002038201620
choroid plexus 0.0023.421 gene 1 gene 16 genes 1 species 1 species UBERON:0001886111611
thymus -0.2066.752 genes 3 genes 13 genes 2 species 3 species UBERON:0002370231323
tendon 1.0087.071 gene 0 gene
17 genes 1 species 0 species
UBERON:0000043101710
motor neuron 1.0083.671 gene 0 gene
17 genes 1 species 0 species
CL:0000100101710
epithelium of lens 1.0055.931 gene 0 gene
17 genes 1 species 0 species
UBERON:0001803101710
right cardiac atrium 1.0039.012 genes 0 gene
16 genes 2 species 0 species
UBERON:0002078201620
internal carotid artery -1.0040.890 gene
1 gene 17 genes 0 species
1 species UBERON:0001532011701
1st arch mandibular component -1.0041.150 gene
1 gene 17 genes 0 species
1 species UBERON:0007237011701
endocardial endothelium -1.0012.040 gene
1 gene 17 genes 0 species
1 species UBERON:0005316011701
Ammon's horn 1.0093.626 genes 0 gene
12 genes 6 species 0 species
UBERON:0001954601260
midbrain mantle layer 1.0064.601 gene 0 gene
17 genes 1 species 0 species
UBERON:0009581101710
epiblast (generic) 1.0050.051 gene 0 gene
17 genes 1 species 0 species
UBERON:0002532101710
adrenal cortex 1.0063.162 genes 0 gene
16 genes 2 species 0 species
UBERON:0001235201620
glossopharyngeal ganglion 1.0059.071 gene 0 gene
17 genes 1 species 0 species
UBERON:0001701101710
sternocleidomastoid -1.0043.570 gene
1 gene 17 genes 0 species
1 species UBERON:0001128011701
brainstem 1.0072.095 genes 0 gene
13 genes 5 species 0 species
UBERON:0002298501350
aorta 0.5088.933 genes 1 gene 14 genes 3 species 1 species UBERON:0000947311431
right kidney -1.0025.140 gene
1 gene 17 genes 0 species
1 species UBERON:0004539011701
retina 1.0082.015 genes 0 gene
13 genes 5 species 0 species
UBERON:0000966501350
somite -1.0041.230 gene
1 gene 17 genes 0 species
1 species UBERON:0002329011701
intestine 0.6760.555 genes 1 gene 12 genes 5 species 1 species UBERON:0000160511251
esophagus 1.0077.874 genes 0 gene
14 genes 4 species 0 species
UBERON:0001043401440
myocardium 1.0065.811 gene 0 gene
17 genes 1 species 0 species
UBERON:0002349101710
blastula 1.0039.504 genes 0 gene
14 genes 4 species 0 species
UBERON:0000307401440
right testis 1.0069.521 gene 0 gene
17 genes 1 species 0 species
UBERON:0004534101710
blood 0.4356.885 genes 2 genes 11 genes 5 species 2 species UBERON:0000178521152
adipose tissue 0.6762.965 genes 1 gene 12 genes 5 species 1 species UBERON:0001013511251
embryonic head 1.0039.561 gene 0 gene
17 genes 1 species 0 species
UBERON:0008816101710
skeletal muscle tissue 0.3374.228 genes 4 genes 6 genes 8 species 4 species UBERON:000113484684
spleen -0.0955.865 genes 6 genes 7 genes 5 species 6 species UBERON:000210656756
kidney 0.8971.8317 genes 1 gene 0 gene
17 species 1 species UBERON:00021131710171
intestinal epithelium -1.0041.670 gene
1 gene 17 genes 0 species
1 species UBERON:0001277011701
pericardium 1.0066.172 genes 0 gene
16 genes 2 species 0 species
UBERON:0002407201620
lung, swim bladder 0.3382.268 genes 4 genes 6 genes 8 species 4 species UBERON:0002048, UBERON:000686084684
cardiac atrium 0.5063.713 genes 1 gene 14 genes 3 species 1 species UBERON:0002081311431
ventral horn of spinal cord 1.0085.221 gene 0 gene
17 genes 1 species 0 species
UBERON:0002257101710
islet of Langerhans 1.0077.782 genes 0 gene
16 genes 2 species 0 species
UBERON:0000006201620
neural tube 1.0088.772 genes 0 gene
16 genes 2 species 0 species
UBERON:0001049201620
pleura 1.0072.201 gene 0 gene
17 genes 1 species 0 species
UBERON:0000977101710
endocardial cushion -1.0039.650 gene
1 gene 17 genes 0 species
1 species UBERON:0002062011701
cerebral hemisphere 1.0078.1014 genes 0 gene
4 genes 14 species 0 species
UBERON:00018691404140
pigmented layer of retina 0.0081.031 gene 1 gene 16 genes 1 species 1 species UBERON:0001782111611
1st arch maxillary component -1.0041.060 gene
1 gene 17 genes 0 species
1 species UBERON:0007238011701
vagus X ganglion 1.0063.622 genes 0 gene
16 genes 2 species 0 species
UBERON:0005362201620
cerebellar cortex 1.0083.964 genes 0 gene
14 genes 4 species 0 species
UBERON:0002129401440
heart 0.7588.0914 genes 2 genes 2 genes 14 species 2 species UBERON:00009481422142
liver 0.2272.5111 genes 7 genes 0 gene
11 species 7 species UBERON:00021071170117
colon 0.1164.585 genes 4 genes 9 genes 5 species 4 species UBERON:000115554954
left testis 1.0066.861 gene 0 gene
17 genes 1 species 0 species
UBERON:0004533101710
muscle organ 1.0065.5312 genes 0 gene
6 genes 12 species 0 species
UBERON:00016301206120
striatum 1.0069.832 genes 0 gene
16 genes 2 species 0 species
UBERON:0002435201620
myocardium of ventricle -1.0039.700 gene
1 gene 17 genes 0 species
1 species UBERON:0001083011701
neurohypophysis 1.0061.222 genes 0 gene
16 genes 2 species 0 species
UBERON:0002198201620
presomitic mesoderm -1.0044.380 gene
1 gene 17 genes 0 species
1 species UBERON:0003059011701
olfactory epithelium -1.0038.600 gene
1 gene 17 genes 0 species
1 species UBERON:0001997011701
dorsal root ganglion 1.0075.642 genes 0 gene
16 genes 2 species 0 species
UBERON:0000044201620
aortic valve 1.0046.141 gene 0 gene
17 genes 1 species 0 species
UBERON:0002137101710
ciliary body -1.0049.460 gene
1 gene 17 genes 0 species
1 species UBERON:0001775011701
ear vesicle 1.0057.831 gene 0 gene
17 genes 1 species 0 species
UBERON:0003051101710
gall bladder 1.0056.652 genes 0 gene
16 genes 2 species 0 species
UBERON:0002110201620
atrioventricular valve 0.0039.641 gene 1 gene 16 genes 1 species 1 species UBERON:0002133111611
parathyroid gland, pharyngeal gill -1.0026.750 gene
1 gene 17 genes 0 species
1 species UBERON:0001132, UBERON:0000206011701
gingiva 1.0069.341 gene 0 gene
17 genes 1 species 0 species
UBERON:0001828101710
peritoneum 1.0069.401 gene 0 gene
17 genes 1 species 0 species
UBERON:0002358101710
zygote 1.0055.201 gene 0 gene
17 genes 1 species 0 species
CL:0000365101710
medulla oblongata 1.0072.703 genes 0 gene
15 genes 3 species 0 species
UBERON:0001896301530
pylorus 1.0062.571 gene 0 gene
17 genes 1 species 0 species
UBERON:0001166101710
caudate nucleus 1.0082.351 gene 0 gene
17 genes 1 species 0 species
UBERON:0001873101710
embryo 1.0071.7610 genes 0 gene
8 genes 10 species 0 species
UBERON:00009221008100
left ovary 1.0059.451 gene 0 gene
17 genes 1 species 0 species
UBERON:0002119101710

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