We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
spinal cord alar plate 1.0061.111 gene 0 gene
17 genes 1 species 0 species
UBERON:0004063101710
mammillary body 1.0066.221 gene 0 gene
17 genes 1 species 0 species
UBERON:0002206101710
chordate pharynx -1.0057.880 gene
1 gene 17 genes 0 species
1 species UBERON:0001042011701
optic fissure 1.0059.031 gene 0 gene
17 genes 1 species 0 species
UBERON:0005412101710
future diencephalon 1.0049.962 genes 0 gene
16 genes 2 species 0 species
UBERON:0006222201620
postcranial axial skeleton -1.0053.710 gene
1 gene 17 genes 0 species
1 species UBERON:0002090011701
semi-lunar valve 1.0049.451 gene 0 gene
17 genes 1 species 0 species
UBERON:0005623101710
brain blood vessel 1.0053.841 gene 0 gene
17 genes 1 species 0 species
UBERON:0003499101710
hindlimb, pelvic fin 1.0054.973 genes 0 gene
15 genes 3 species 0 species
UBERON:0002103, UBERON:0000152301530
hypothalamus 1.0061.517 genes 0 gene
11 genes 7 species 0 species
UBERON:0001898701170
paraxial mesoderm 0.0061.781 gene 1 gene 16 genes 1 species 1 species UBERON:0003077111611
nervous system 1.0061.0918 genes 0 gene
0 gene
18 species 0 species
UBERON:00010161800180
gastrula 0.3355.252 genes 1 gene 15 genes 2 species 1 species UBERON:0004734211521
cleaving embryo -1.0049.380 gene
2 genes 16 genes 0 species
2 species UBERON:0007010021602
midbrain 1.0078.223 genes 0 gene
15 genes 3 species 0 species
UBERON:0001891301530
retinal neural layer 1.0077.302 genes 0 gene
16 genes 2 species 0 species
UBERON:0003902201620
neuron 1.0058.812 genes 0 gene
16 genes 2 species 0 species
CL:0000540201620
cornea 1.0044.181 gene 0 gene
17 genes 1 species 0 species
UBERON:0000964101710
hindbrain 1.0082.5415 genes 0 gene
3 genes 15 species 0 species
UBERON:00020281503150
cranial nerve II -1.0059.980 gene
1 gene 17 genes 0 species
1 species UBERON:0000941011701
inner nuclear layer of retina 1.0062.471 gene 0 gene
17 genes 1 species 0 species
UBERON:0001791101710
stomach -0.6024.761 gene 4 genes 13 genes 1 species 4 species UBERON:0000945141314
pituitary gland -0.4352.712 genes 5 genes 11 genes 2 species 5 species UBERON:0000007251125
pancreas -0.5051.491 gene 3 genes 14 genes 1 species 3 species UBERON:0001264131413
extra-ocular muscle -1.0034.880 gene
1 gene 17 genes 0 species
1 species UBERON:0001601011701
limb, paired fin 1.0027.463 genes 0 gene
15 genes 3 species 0 species
UBERON:0002101, UBERON:0002534301530
spinal cord mantle layer 1.0054.521 gene 0 gene
17 genes 1 species 0 species
UBERON:0009583101710
manus, pectoral fin radial bone 1.0071.621 gene 0 gene
17 genes 1 species 0 species
UBERON:0002398, UBERON:2001586101710
face 1.0060.704 genes 0 gene
14 genes 4 species 0 species
UBERON:0001456401440
blood vessel 1.0058.312 genes 0 gene
16 genes 2 species 0 species
UBERON:0001981201620
pallium 1.0066.6611 genes 0 gene
7 genes 11 species 0 species
UBERON:00002031107110
putamen -1.0027.420 gene
1 gene 17 genes 0 species
1 species UBERON:0001874011701
telencephalon 1.0070.7511 genes 0 gene
7 genes 11 species 0 species
UBERON:00018931107110
utricle of membranous labyrinth 1.0069.861 gene 0 gene
17 genes 1 species 0 species
UBERON:0001853101710
eyeball of camera-type eye 1.0057.154 genes 0 gene
14 genes 4 species 0 species
UBERON:0010230401440
right ovary -1.0025.020 gene
1 gene 17 genes 0 species
1 species UBERON:0002118011701
male reproductive system 1.0036.2116 genes 0 gene
2 genes 16 species 0 species
UBERON:00000791602160
testis 0.7867.9816 genes 2 genes 0 gene
16 species 2 species UBERON:00004731620162
autopod skin -1.007.220 gene
1 gene 17 genes 0 species
1 species UBERON:0015790011701
multi-cellular organism 1.0063.7418 genes 0 gene
0 gene
18 species 0 species
UBERON:00004681800180
ventricular zone 1.0037.392 genes 0 gene
16 genes 2 species 0 species
UBERON:0003053201620
skin epidermis 1.0045.521 gene 0 gene
17 genes 1 species 0 species
UBERON:0001003101710
epithalamus 1.0071.432 genes 0 gene
16 genes 2 species 0 species
UBERON:0001899201620
embryonic post-anal tail -1.0018.030 gene
1 gene 17 genes 0 species
1 species UBERON:0007144011701
peripheral nervous system 1.0059.591 gene 0 gene
17 genes 1 species 0 species
UBERON:0000010101710
central nervous system 1.0059.0218 genes 0 gene
0 gene
18 species 0 species
UBERON:00010171800180
fibroblast -1.0026.440 gene
4 genes 14 genes 0 species
4 species CL:0000057041404
mesonephros 0.004.841 gene 1 gene 16 genes 1 species 1 species UBERON:0000080111611
iris 1.0053.311 gene 0 gene
17 genes 1 species 0 species
UBERON:0001769101710
head 1.0085.355 genes 0 gene
13 genes 5 species 0 species
UBERON:0000033501350
choroid plexus epithelium 1.0056.651 gene 0 gene
17 genes 1 species 0 species
UBERON:0003911101710
tongue muscle -1.0012.560 gene
1 gene 17 genes 0 species
1 species UBERON:0000378011701
trigeminal ganglion 1.0054.911 gene 0 gene
17 genes 1 species 0 species
UBERON:0001675101710
forebrain 1.0074.9512 genes 0 gene
6 genes 12 species 0 species
UBERON:00018901206120
vertebral column -1.0046.040 gene
1 gene 17 genes 0 species
1 species UBERON:0001130011701
caecum -1.0011.870 gene
2 genes 16 genes 0 species
2 species UBERON:0001153021602
diencephalon 1.0084.207 genes 0 gene
11 genes 7 species 0 species
UBERON:0001894701170
heart left ventricle, primary heart field -0.2061.682 genes 3 genes 13 genes 2 species 3 species UBERON:0002084, UBERON:0004140231323
olfactory bulb 1.0063.352 genes 0 gene
16 genes 2 species 0 species
UBERON:0002264201620
lens of camera-type eye 1.0067.391 gene 0 gene
17 genes 1 species 0 species
UBERON:0000965101710
ear 1.0048.141 gene 0 gene
17 genes 1 species 0 species
UBERON:0001690101710
brain 1.0081.3718 genes 0 gene
0 gene
18 species 0 species
UBERON:00009551800180
collection of basal ganglia 1.0063.882 genes 0 gene
16 genes 2 species 0 species
UBERON:0010011201620
smooth muscle tissue -0.5019.921 gene 3 genes 14 genes 1 species 3 species UBERON:0001135131413
heart right ventricle -1.008.980 gene
1 gene 17 genes 0 species
1 species UBERON:0002080011701
lip -1.0029.540 gene
1 gene 17 genes 0 species
1 species UBERON:0001833011701
ganglionic layer of retina 1.0071.411 gene 0 gene
17 genes 1 species 0 species
UBERON:0001792101710
gonad 1.0061.5216 genes 0 gene
2 genes 16 species 0 species
UBERON:00009911602160
female gonad -0.5049.113 genes 9 genes 6 genes 3 species 9 species UBERON:000099239639
internal ear 1.0084.491 gene 0 gene
17 genes 1 species 0 species
UBERON:0001846101710
ileum -0.6044.341 gene 4 genes 13 genes 1 species 4 species UBERON:0002116141314
mitral valve -1.0017.840 gene
1 gene 17 genes 0 species
1 species UBERON:0002135011701
cartilage tissue -1.008.620 gene
1 gene 17 genes 0 species
1 species UBERON:0002418011701
blastopore, primitive streak 1.0063.311 gene 0 gene
17 genes 1 species 0 species
UBERON:0000100, UBERON:0004341101710
thyroid gland -1.0076.180 gene
5 genes 13 genes 0 species
5 species UBERON:0002046051305
adenohypophysis 0.0044.011 gene 1 gene 16 genes 1 species 1 species UBERON:0002196111611
midbrain tegmentum 1.0067.381 gene 0 gene
17 genes 1 species 0 species
UBERON:0001943101710
larva 1.0076.661 gene 0 gene
17 genes 1 species 0 species
UBERON:0002548101710
bone element 1.0060.943 genes 0 gene
15 genes 3 species 0 species
UBERON:0001474301530
cerebellum 1.0095.1214 genes 0 gene
4 genes 14 species 0 species
UBERON:00020371404140
fundus of stomach -1.0021.040 gene
1 gene 17 genes 0 species
1 species UBERON:0001160011701
pineal body 1.0070.461 gene 0 gene
17 genes 1 species 0 species
UBERON:0001905101710
dermis 1.0050.971 gene 0 gene
17 genes 1 species 0 species
UBERON:0002067101710
cardiac ventricle 0.3362.352 genes 1 gene 15 genes 2 species 1 species UBERON:0002082211521
dorsal horn of spinal cord 1.0070.351 gene 0 gene
17 genes 1 species 0 species
UBERON:0002256101710
outflow tract 1.0031.221 gene 0 gene
17 genes 1 species 0 species
UBERON:0004145101710
camera-type eye 1.0063.644 genes 0 gene
14 genes 4 species 0 species
UBERON:0000019401440
caudal tuberculum, substantia nigra 1.0059.983 genes 0 gene
15 genes 3 species 0 species
UBERON:2000633, UBERON:0002038301530
choroid plexus 0.0058.101 gene 1 gene 16 genes 1 species 1 species UBERON:0001886111611
thymus -0.5033.061 gene 3 genes 14 genes 1 species 3 species UBERON:0002370131413
forelimb, pectoral fin 1.0070.821 gene 0 gene
17 genes 1 species 0 species
UBERON:0002102, UBERON:0000151101710
olfactory cortex 1.0068.741 gene 0 gene
17 genes 1 species 0 species
UBERON:0002894101710
epithelium of lens 1.0039.681 gene 0 gene
17 genes 1 species 0 species
UBERON:0001803101710
right cardiac atrium -1.008.440 gene
1 gene 17 genes 0 species
1 species UBERON:0002078011701
internal carotid artery 1.0078.681 gene 0 gene
17 genes 1 species 0 species
UBERON:0001532101710
1st arch mandibular component 1.0061.011 gene 0 gene
17 genes 1 species 0 species
UBERON:0007237101710
neural plate 1.0051.601 gene 0 gene
17 genes 1 species 0 species
UBERON:0003075101710
endocardial endothelium -1.0012.040 gene
1 gene 17 genes 0 species
1 species UBERON:0005316011701
calcareous tooth 1.0063.141 gene 0 gene
17 genes 1 species 0 species
UBERON:0001091101710
Ammon's horn -0.2049.492 genes 3 genes 13 genes 2 species 3 species UBERON:0001954231323
midbrain mantle layer 1.0092.681 gene 0 gene
17 genes 1 species 0 species
UBERON:0009581101710
epiblast (generic) 1.0062.791 gene 0 gene
17 genes 1 species 0 species
UBERON:0002532101710
adrenal cortex -1.006.010 gene
1 gene 17 genes 0 species
1 species UBERON:0001235011701
sternocleidomastoid -1.0037.320 gene
1 gene 17 genes 0 species
1 species UBERON:0001128011701
brainstem -0.3358.381 gene 2 genes 15 genes 1 species 2 species UBERON:0002298121512
aorta 0.0049.992 genes 2 genes 14 genes 2 species 2 species UBERON:0000947221422
right kidney -1.0015.290 gene
1 gene 17 genes 0 species
1 species UBERON:0004539011701
somite -1.0058.350 gene
1 gene 17 genes 0 species
1 species UBERON:0002329011701
retina 0.5088.073 genes 1 gene 14 genes 3 species 1 species UBERON:0000966311431
intestine -0.3328.761 gene 2 genes 15 genes 1 species 2 species UBERON:0000160121512
esophagus -1.0025.240 gene
4 genes 14 genes 0 species
4 species UBERON:0001043041404
blastula 1.0040.653 genes 0 gene
15 genes 3 species 0 species
UBERON:0000307301530
right testis 1.0064.941 gene 0 gene
17 genes 1 species 0 species
UBERON:0004534101710
blood -0.5057.112 genes 6 genes 10 genes 2 species 6 species UBERON:0000178261026
adipose tissue 0.0044.933 genes 3 genes 12 genes 3 species 3 species UBERON:0001013331233
kidney blood vessel -1.0063.320 gene
1 gene 17 genes 0 species
1 species UBERON:0003517011701
embryonic head 1.0035.172 genes 0 gene
16 genes 2 species 0 species
UBERON:0008816201620
skeletal muscle tissue -0.8238.581 gene 10 genes 7 genes 1 species 10 species UBERON:00011341107110
integumental system 1.0055.144 genes 0 gene
14 genes 4 species 0 species
UBERON:0002416401440
cardiovascular system 1.0055.146 genes 0 gene
12 genes 6 species 0 species
UBERON:0004535601260
spleen -0.8044.051 gene 9 genes 8 genes 1 species 9 species UBERON:000210619819
kidney -0.2752.614 genes 7 genes 7 genes 4 species 7 species UBERON:000211347747
lung, swim bladder -0.6444.002 genes 9 genes 7 genes 2 species 9 species UBERON:0002048, UBERON:000686029729
cardiac atrium 0.0066.421 gene 1 gene 16 genes 1 species 1 species UBERON:0002081111611
ventral horn of spinal cord 1.0044.231 gene 0 gene
17 genes 1 species 0 species
UBERON:0002257101710
islet of Langerhans 0.0042.461 gene 1 gene 16 genes 1 species 1 species UBERON:0000006111611
neural tube 1.0065.873 genes 0 gene
15 genes 3 species 0 species
UBERON:0001049301530
endocardial cushion 1.0051.251 gene 0 gene
17 genes 1 species 0 species
UBERON:0002062101710
cerebral hemisphere 1.0058.2410 genes 0 gene
8 genes 10 species 0 species
UBERON:00018691008100
appendicular skeleton 1.0063.631 gene 0 gene
17 genes 1 species 0 species
UBERON:0002091101710
pigmented layer of retina -1.0049.140 gene
1 gene 17 genes 0 species
1 species UBERON:0001782011701
1st arch maxillary component 1.0061.071 gene 0 gene
17 genes 1 species 0 species
UBERON:0007238101710
cerebellar cortex 1.0092.464 genes 0 gene
14 genes 4 species 0 species
UBERON:0002129401440
cranial ganglion 1.0069.211 gene 0 gene
17 genes 1 species 0 species
UBERON:0001714101710
heart -0.2546.206 genes 10 genes 2 genes 6 species 10 species UBERON:00009486102610
liver -0.4456.805 genes 13 genes 0 gene
5 species 13 species UBERON:00021075130513
cranium 1.0053.531 gene 0 gene
17 genes 1 species 0 species
UBERON:0003128101710
colon -0.7535.561 gene 7 genes 10 genes 1 species 7 species UBERON:0001155171017
left testis 1.0063.651 gene 0 gene
17 genes 1 species 0 species
UBERON:0004533101710
muscle organ 0.5022.683 genes 1 gene 14 genes 3 species 1 species UBERON:0001630311431
striatum 1.0054.601 gene 0 gene
17 genes 1 species 0 species
UBERON:0002435101710
myocardium of ventricle 1.0068.911 gene 0 gene
17 genes 1 species 0 species
UBERON:0001083101710
neurohypophysis 1.0037.252 genes 0 gene
16 genes 2 species 0 species
UBERON:0002198201620
presomitic mesoderm 0.0046.711 gene 1 gene 16 genes 1 species 1 species UBERON:0003059111611
olfactory epithelium 1.0053.591 gene 0 gene
17 genes 1 species 0 species
UBERON:0001997101710
meninx -1.0063.140 gene
1 gene 17 genes 0 species
1 species UBERON:0002360011701
dorsal root ganglion 1.0051.371 gene 0 gene
17 genes 1 species 0 species
UBERON:0000044101710
aortic valve 1.0054.111 gene 0 gene
17 genes 1 species 0 species
UBERON:0002137101710
ciliary body -1.0050.450 gene
1 gene 17 genes 0 species
1 species UBERON:0001775011701
ear vesicle 1.0058.181 gene 0 gene
17 genes 1 species 0 species
UBERON:0003051101710
musculature 1.0065.383 genes 0 gene
15 genes 3 species 0 species
UBERON:0001015301530
gall bladder -1.0021.990 gene
2 genes 16 genes 0 species
2 species UBERON:0002110021602
atrioventricular valve 1.0051.291 gene 0 gene
17 genes 1 species 0 species
UBERON:0002133101710
parathyroid gland, pharyngeal gill -1.0020.920 gene
1 gene 17 genes 0 species
1 species UBERON:0001132, UBERON:0000206011701
renal system 1.0075.324 genes 0 gene
14 genes 4 species 0 species
UBERON:0001008401440
zygote -1.0023.340 gene
1 gene 17 genes 0 species
1 species CL:0000365011701
respiratory system 1.0055.532 genes 0 gene
16 genes 2 species 0 species
UBERON:0001004201620
medulla oblongata 0.0051.481 gene 1 gene 16 genes 1 species 1 species UBERON:0001896111611
caudate nucleus -1.0029.680 gene
1 gene 17 genes 0 species
1 species UBERON:0001873011701
embryo 1.0070.368 genes 0 gene
10 genes 8 species 0 species
UBERON:0000922801080
left ovary -1.0025.110 gene
1 gene 17 genes 0 species
1 species UBERON:0002119011701

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