We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
female gonad 0.3389.158 genes 4 genes 2 genes 8 species 4 species UBERON:000099284284
intestine 0.6066.744 genes 1 gene 9 genes 4 species 1 species UBERON:000016041941
gonad 1.0061.5214 genes 0 gene
0 gene
11 species 0 species
UBERON:00009911400110
aortic valve 0.0051.251 gene 1 gene 12 genes 1 species 1 species UBERON:0002137111211
embryo 0.5091.006 genes 2 genes 6 genes 6 species 2 species UBERON:000092262662
adipose tissue 0.3357.192 genes 1 gene 11 genes 2 species 1 species UBERON:0001013211121
choroid plexus 1.0062.751 gene 0 gene
13 genes 1 species 0 species
UBERON:0001886101310
smooth muscle tissue 0.5083.303 genes 1 gene 10 genes 3 species 1 species UBERON:0001135311031
larynx -1.0061.750 gene
1 gene 13 genes 0 species
1 species UBERON:0001737011301
trachea 1.0056.491 gene 0 gene
13 genes 1 species 0 species
UBERON:0003126101310
dorsal root ganglion 0.0061.421 gene 1 gene 12 genes 1 species 1 species UBERON:0000044111211
epithelium of small intestine -1.0051.830 gene
2 genes 12 genes 0 species
1 species UBERON:0001902021201
integumental system 1.0055.146 genes 0 gene
8 genes 6 species 0 species
UBERON:000241660860
pes 1.0061.891 gene 0 gene
13 genes 1 species 0 species
UBERON:0002387101310
calcareous tooth -1.0063.140 gene
1 gene 13 genes 0 species
1 species UBERON:0001091011301
intercostal muscle 0.0070.541 gene 1 gene 12 genes 1 species 1 species UBERON:0001111111211
1st arch maxillary component 0.0065.801 gene 1 gene 12 genes 1 species 1 species UBERON:0007238111211
internal carotid artery -1.0054.180 gene
2 genes 12 genes 0 species
1 species UBERON:0001532021201
retina 0.3356.472 genes 1 gene 11 genes 2 species 1 species UBERON:0000966211121
pigmented layer of retina 0.0064.041 gene 1 gene 12 genes 1 species 1 species UBERON:0001782111211
1st arch mandibular component 0.0065.181 gene 1 gene 12 genes 1 species 1 species UBERON:0007237111211
thymus 0.2067.923 genes 2 genes 9 genes 3 species 2 species UBERON:000237032932
aorta 0.0075.432 genes 2 genes 10 genes 2 species 2 species UBERON:0000947221022
parotid gland -1.0068.180 gene
2 genes 12 genes 0 species
1 species UBERON:0001831021201
endocardial cushion 0.0059.391 gene 1 gene 12 genes 1 species 1 species UBERON:0002062111211
striatum 0.0067.241 gene 1 gene 12 genes 1 species 1 species UBERON:0002435111211
collection of basal ganglia 1.0066.651 gene 0 gene
13 genes 1 species 0 species
UBERON:0010011101310
cardiac atrium 0.3364.032 genes 1 gene 11 genes 2 species 1 species UBERON:0002081211121
metanephric ureteric bud 0.0062.871 gene 1 gene 12 genes 1 species 1 species UBERON:0005080111211
head 1.0077.496 genes 0 gene
8 genes 5 species 0 species
UBERON:000003360850
sternocleidomastoid 0.0065.391 gene 1 gene 12 genes 1 species 1 species UBERON:0001128111211
globus pallidus 0.0060.021 gene 1 gene 12 genes 1 species 1 species UBERON:0001875111211
ureter smooth muscle 0.0059.421 gene 1 gene 12 genes 1 species 1 species UBERON:0009919111211
cranial ganglion 1.0069.211 gene 0 gene
13 genes 1 species 0 species
UBERON:0001714101310
renal corpuscle 0.0061.691 gene 1 gene 12 genes 1 species 1 species UBERON:0001229111211
hindlimb 1.0054.972 genes 0 gene
12 genes 2 species 0 species
UBERON:0002103201220
lung 0.4088.127 genes 3 genes 4 genes 6 species 3 species UBERON:000204873463
cerebral hemisphere 0.7565.207 genes 1 gene 6 genes 6 species 1 species UBERON:000186971661
intestinal epithelium 1.0041.671 gene 0 gene
13 genes 1 species 0 species
UBERON:0001277101310
Wulst, primary visual cortex 0.0078.541 gene 1 gene 12 genes 1 species 1 species UBERON:0014756, UBERON:0002436111211
meninx 1.0073.671 gene 0 gene
13 genes 1 species 0 species
UBERON:0002360101310
metanephros 0.3361.052 genes 1 gene 11 genes 2 species 1 species UBERON:0000081211121
stomach 0.2070.923 genes 2 genes 9 genes 3 species 2 species UBERON:000094532932
ciliary body -1.0062.360 gene
2 genes 12 genes 0 species
1 species UBERON:0001775021201
male reproductive system 1.0061.9013 genes 0 gene
1 gene 10 species 0 species
UBERON:00000791301100
presomitic mesoderm 0.0056.911 gene 1 gene 12 genes 1 species 1 species UBERON:0003059111211
skeletal muscle tissue 0.4089.827 genes 3 genes 4 genes 6 species 3 species UBERON:000113473463
neural tube 0.0082.031 gene 1 gene 12 genes 1 species 1 species UBERON:0001049111211
testis 0.8699.5113 genes 1 gene 0 gene
10 species 1 species UBERON:00004731310101
eyeball of camera-type eye 0.5057.713 genes 1 gene 10 genes 3 species 1 species UBERON:0010230311031
vault of skull 0.0065.951 gene 1 gene 12 genes 1 species 1 species UBERON:0004339111211
renal system 1.0075.329 genes 0 gene
5 genes 9 species 0 species
UBERON:000100890590
medulla oblongata 1.0051.481 gene 0 gene
13 genes 1 species 0 species
UBERON:0001896101310
adrenal gland 0.2065.653 genes 2 genes 9 genes 3 species 2 species UBERON:000236932932
left cardiac atrium 1.0064.991 gene 0 gene
13 genes 1 species 0 species
UBERON:0002079101310
extra-ocular muscle 0.0069.161 gene 1 gene 12 genes 1 species 1 species UBERON:0001601111211
gastrula 0.0068.571 gene 1 gene 12 genes 1 species 1 species UBERON:0004734111211
right cardiac atrium 1.0063.741 gene 0 gene
13 genes 1 species 0 species
UBERON:0002078101310
cranial nerve II 1.0041.101 gene 0 gene
13 genes 1 species 0 species
UBERON:0000941101310
pituitary gland 0.0082.702 genes 2 genes 10 genes 2 species 2 species UBERON:0000007221022
cochlea 0.0057.491 gene 1 gene 12 genes 1 species 1 species UBERON:0001844111211
sciatic nerve 0.0062.381 gene 1 gene 12 genes 1 species 1 species UBERON:0001322111211
olfactory cortex 1.0056.241 gene 0 gene
13 genes 1 species 0 species
UBERON:0002894101310
heart 0.8383.4311 genes 1 gene 2 genes 8 species 1 species UBERON:0000948111281
autopod skin 0.0084.451 gene 1 gene 12 genes 1 species 1 species UBERON:0015790111211
liver 0.2973.049 genes 5 genes 0 gene
9 species 5 species UBERON:000210795095
adrenal cortex 1.0061.361 gene 0 gene
13 genes 1 species 0 species
UBERON:0001235101310
retinal neural layer 0.0055.911 gene 1 gene 12 genes 1 species 1 species UBERON:0003902111211
colon 0.3367.394 genes 2 genes 8 genes 4 species 2 species UBERON:000115542842
yolk sac 0.0065.501 gene 1 gene 12 genes 1 species 1 species UBERON:0001040111211
respiratory system 1.0055.538 genes 0 gene
6 genes 7 species 0 species
UBERON:000100480670
small intestine 0.5059.273 genes 1 gene 10 genes 3 species 1 species UBERON:0002108311031
tongue 0.0080.151 gene 1 gene 12 genes 1 species 1 species UBERON:0001723111211
saliva-secreting gland 0.3363.812 genes 1 gene 11 genes 2 species 1 species UBERON:0001044211121
hypothalamus 0.0070.682 genes 2 genes 10 genes 2 species 2 species UBERON:0001898221022
synovial membrane of synovial joint 1.0056.631 gene 0 gene
13 genes 1 species 0 species
UBERON:0002018101310
ear vesicle 0.0053.881 gene 1 gene 12 genes 1 species 1 species UBERON:0003051111211
utricle of membranous labyrinth 1.0058.321 gene 0 gene
13 genes 1 species 0 species
UBERON:0001853101310
zygote 0.0093.031 gene 1 gene 12 genes 1 species 1 species CL:0000365111211
metanephric mesenchyme 0.0061.811 gene 1 gene 12 genes 1 species 1 species UBERON:0003220111211
cerebellar cortex 0.0070.181 gene 1 gene 12 genes 1 species 1 species UBERON:0002129111211
myocardium of ventricle 0.3382.792 genes 1 gene 11 genes 2 species 1 species UBERON:0001083211121
submandibular gland -1.0066.000 gene
2 genes 12 genes 0 species
1 species UBERON:0001736021201
musculature 1.0065.388 genes 0 gene
6 genes 7 species 0 species
UBERON:000101580670
mitral valve 1.0046.641 gene 0 gene
13 genes 1 species 0 species
UBERON:0002135101310
metanephros cortex 1.0073.892 genes 0 gene
12 genes 2 species 0 species
UBERON:0010533201220
pancreas 0.6061.634 genes 1 gene 9 genes 3 species 1 species UBERON:000126441931
substantia nigra 0.0059.101 gene 1 gene 12 genes 1 species 1 species UBERON:0002038111211
cleaving embryo 0.0063.341 gene 1 gene 12 genes 1 species 1 species UBERON:0007010111211
camera-type eye 0.5061.853 genes 1 gene 10 genes 3 species 1 species UBERON:0000019311031
heart right ventricle 1.0075.452 genes 0 gene
12 genes 2 species 0 species
UBERON:0002080201220
ileum 0.0064.592 genes 2 genes 10 genes 2 species 2 species UBERON:0002116221022
olfactory epithelium 0.0066.371 gene 1 gene 12 genes 1 species 1 species UBERON:0001997111211
anterior leaflet of mitral valve, atrioventricular valve, tricuspid valve cusp 0.3359.142 genes 1 gene 11 genes 2 species 1 species UBERON:0014854, UBERON:0002133, UBERON:0005998211121
otic placode 1.0055.611 gene 0 gene
13 genes 1 species 0 species
UBERON:0003069101310
telencephalon 0.7569.357 genes 1 gene 6 genes 6 species 1 species UBERON:000189371661
cranium 1.0053.531 gene 0 gene
13 genes 1 species 0 species
UBERON:0003128101310
ear 0.3376.812 genes 1 gene 11 genes 2 species 1 species UBERON:0001690211121
cartilage tissue 1.0068.242 genes 0 gene
12 genes 2 species 0 species
UBERON:0002418201220
skin of external ear 0.0077.191 gene 1 gene 12 genes 1 species 1 species UBERON:0001459111211
face 1.0060.705 genes 0 gene
9 genes 5 species 0 species
UBERON:000145650950
cornea 0.0055.111 gene 1 gene 12 genes 1 species 1 species UBERON:0000964111211
peripheral nervous system 1.0059.591 gene 0 gene
13 genes 1 species 0 species
UBERON:0000010101310
oviduct shell gland, uterus 0.4391.805 genes 2 genes 7 genes 5 species 2 species UBERON:0008975, UBERON:000099552752
mammillary body 0.0059.701 gene 1 gene 12 genes 1 species 1 species UBERON:0002206111211
hindbrain 0.7182.916 genes 1 gene 7 genes 6 species 1 species UBERON:000202861761
iris 0.0066.451 gene 1 gene 12 genes 1 species 1 species UBERON:0001769111211
chordate pharynx -1.0057.880 gene
1 gene 13 genes 0 species
1 species UBERON:0001042011301
optic fissure 0.0063.701 gene 1 gene 12 genes 1 species 1 species UBERON:0005412111211
midbrain 0.0081.581 gene 1 gene 12 genes 1 species 1 species UBERON:0001891111211
appendicular skeleton 1.0063.631 gene 0 gene
13 genes 1 species 0 species
UBERON:0002091101310
nervous system 1.0053.6810 genes 0 gene
4 genes 9 species 0 species
UBERON:0001016100490
urinary bladder 0.3371.542 genes 1 gene 11 genes 2 species 1 species UBERON:0001255211121
central nervous system 0.8259.6110 genes 1 gene 3 genes 9 species 1 species UBERON:0001017101391
saccule of membranous labyrinth 1.0051.661 gene 0 gene
13 genes 1 species 0 species
UBERON:0001854101310
heart left ventricle 0.0073.492 genes 2 genes 10 genes 2 species 2 species UBERON:0002084221022
skin epidermis 0.3362.512 genes 1 gene 11 genes 2 species 1 species UBERON:0001003211121
limb 0.6077.544 genes 1 gene 9 genes 4 species 1 species UBERON:000210141941
metanephric collecting duct 1.0042.421 gene 0 gene
13 genes 1 species 0 species
UBERON:0004737101310
fibroblast 0.3376.102 genes 1 gene 11 genes 2 species 1 species CL:0000057211121
spleen 0.7168.036 genes 1 gene 7 genes 5 species 1 species UBERON:000210661751
large intestine 0.6063.224 genes 1 gene 9 genes 4 species 1 species UBERON:000005941941
kidney 0.5490.7610 genes 3 genes 1 gene 10 species 3 species UBERON:00021131031103
blood 0.4384.925 genes 2 genes 7 genes 5 species 2 species UBERON:000017852752
amygdala 0.0069.911 gene 1 gene 12 genes 1 species 1 species UBERON:0001876111211
lip 1.0081.852 genes 0 gene
12 genes 1 species 0 species
UBERON:0001833201210
embryonic head 1.0057.162 genes 0 gene
12 genes 2 species 0 species
UBERON:0008816201220
outflow tract 0.3367.882 genes 1 gene 11 genes 2 species 1 species UBERON:0004145211121
dermis 0.0056.421 gene 1 gene 12 genes 1 species 1 species UBERON:0002067111211
islet of Langerhans 1.0079.882 genes 0 gene
12 genes 1 species 0 species
UBERON:0000006201210
dentate gyrus of hippocampal formation 0.0064.771 gene 1 gene 12 genes 1 species 1 species UBERON:0001885111211
mouth 1.0065.704 genes 0 gene
10 genes 3 species 0 species
UBERON:0000165401030
epithelium of bronchus 1.0084.471 gene 0 gene
13 genes 1 species 0 species
UBERON:0002031101310
forebrain 0.7575.637 genes 1 gene 6 genes 6 species 1 species UBERON:000189071661
carotid body 0.0050.991 gene 1 gene 12 genes 1 species 1 species UBERON:0001629111211
ventral horn of spinal cord 0.0054.261 gene 1 gene 12 genes 1 species 1 species UBERON:0002257111211
internal ear 1.0051.441 gene 0 gene
13 genes 1 species 0 species
UBERON:0001846101310
neocortex 0.7564.447 genes 1 gene 6 genes 6 species 1 species UBERON:000195071661
Ammon's horn 0.0074.511 gene 1 gene 12 genes 1 species 1 species UBERON:0001954111211
cardiovascular system 1.0055.1412 genes 0 gene
2 genes 9 species 0 species
UBERON:0004535120290
duodenum 0.0061.202 genes 2 genes 10 genes 2 species 2 species UBERON:0002114221022
cerebellum 0.2087.626 genes 4 genes 4 genes 6 species 4 species UBERON:000203764464
primitive streak 0.0065.671 gene 1 gene 12 genes 1 species 1 species UBERON:0004341111211
blood vessel 1.0058.312 genes 0 gene
12 genes 2 species 0 species
UBERON:0001981201220
bone element 0.5058.593 genes 1 gene 10 genes 3 species 1 species UBERON:0001474311031
brain blood vessel 0.0062.001 gene 1 gene 12 genes 1 species 1 species UBERON:0003499111211
embryonic post-anal tail -0.3380.521 gene 2 genes 11 genes 1 species 2 species UBERON:0007144121112
ventricular zone 0.0078.041 gene 1 gene 12 genes 1 species 1 species UBERON:0003053111211
lens of camera-type eye 0.0069.241 gene 1 gene 12 genes 1 species 1 species UBERON:0000965111211
seminiferous tubule of testis 1.0084.872 genes 0 gene
12 genes 1 species 0 species
UBERON:0001343201210
semi-lunar valve 0.0056.731 gene 1 gene 12 genes 1 species 1 species UBERON:0005623111211
epithelium of lens 0.0039.681 gene 1 gene 12 genes 1 species 1 species UBERON:0001803111211
postcranial axial skeleton -1.0053.710 gene
1 gene 13 genes 0 species
1 species UBERON:0002090011301
motor neuron -1.0042.030 gene
1 gene 13 genes 0 species
1 species CL:0000100011301
multi-cellular organism 1.0076.7314 genes 0 gene
0 gene
11 species 0 species
UBERON:00004681400110
somite 1.0041.231 gene 0 gene
13 genes 1 species 0 species
UBERON:0002329101310
oviduct epithelium 1.0082.131 gene 0 gene
13 genes 1 species 0 species
UBERON:0004804101310
choroid plexus epithelium 0.0070.721 gene 1 gene 12 genes 1 species 1 species UBERON:0003911111211
esophagus 0.0070.822 genes 2 genes 10 genes 2 species 2 species UBERON:0001043221022
brain 0.4385.9410 genes 4 genes 0 gene
9 species 4 species UBERON:0000955104094
cardiac ventricle 0.3365.842 genes 1 gene 11 genes 2 species 1 species UBERON:0002082211121
brainstem -0.3356.061 gene 2 genes 11 genes 1 species 2 species UBERON:0002298121112
right kidney 0.0075.131 gene 1 gene 12 genes 1 species 1 species UBERON:0004539111211
diencephalon 1.0053.912 genes 0 gene
12 genes 2 species 0 species
UBERON:0001894201220
trigeminal ganglion 0.0065.441 gene 1 gene 12 genes 1 species 1 species UBERON:0001675111211
olfactory bulb 0.3371.042 genes 1 gene 11 genes 2 species 1 species UBERON:0002264211121
pineal body 0.0062.041 gene 1 gene 12 genes 1 species 1 species UBERON:0001905111211
jejunum 0.2062.593 genes 2 genes 9 genes 3 species 2 species UBERON:000211532932
cerebral cortex 0.7570.977 genes 1 gene 6 genes 6 species 1 species UBERON:000095671661
midbrain tegmentum 1.0060.851 gene 0 gene
13 genes 1 species 0 species
UBERON:0001943101310
ureter 0.0054.241 gene 1 gene 12 genes 1 species 1 species UBERON:0000056111211
manus 1.0064.341 gene 0 gene
13 genes 1 species 0 species
UBERON:0002398101310
forelimb 1.0070.822 genes 0 gene
12 genes 2 species 0 species
UBERON:0002102201220
bone marrow 0.5055.103 genes 1 gene 10 genes 3 species 1 species UBERON:0002371311031
epiblast (generic) 0.0068.871 gene 1 gene 12 genes 1 species 1 species UBERON:0002532111211
thyroid gland -0.3378.021 gene 2 genes 11 genes 1 species 2 species UBERON:0002046121112
main bronchus -1.0064.990 gene
1 gene 13 genes 0 species
1 species UBERON:0002182011301

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