We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
chordate pharynx -1.0057.880 gene
1 gene 21 genes 0 species
1 species UBERON:0001042012101
postcranial axial skeleton -1.0053.710 gene
1 gene 21 genes 0 species
1 species UBERON:0002090012101
epithelial cell of pancreas -1.0068.010 gene
1 gene 21 genes 0 species
1 species CL:0000083012101
hindlimb, pelvic fin 1.0061.647 genes 0 gene
15 genes 7 species 0 species
UBERON:0002103, UBERON:0000152701570
hypothalamus 1.0072.986 genes 0 gene
16 genes 6 species 0 species
UBERON:0001898601660
nervous system 1.0061.0922 genes 0 gene
0 gene
21 species 0 species
UBERON:00010162200210
gingival epithelium -1.0042.370 gene
1 gene 21 genes 0 species
1 species UBERON:0001949012101
gastrula -0.3349.421 gene 2 genes 19 genes 1 species 1 species UBERON:0004734121911
midbrain 1.0041.442 genes 0 gene
20 genes 2 species 0 species
UBERON:0001891202020
retinal neural layer 1.0055.001 gene 0 gene
21 genes 1 species 0 species
UBERON:0003902102110
cornea -1.0074.990 gene
1 gene 21 genes 0 species
1 species UBERON:0000964012101
hindbrain 1.0039.0615 genes 0 gene
7 genes 15 species 0 species
UBERON:00020281507150
cranial nerve II -1.0059.980 gene
1 gene 21 genes 0 species
1 species UBERON:0000941012101
stomach 0.3344.734 genes 2 genes 16 genes 4 species 2 species UBERON:0000945421642
pituitary gland -0.4378.322 genes 5 genes 15 genes 2 species 5 species UBERON:0000007251525
inferior vagus X ganglion -1.0041.560 gene
1 gene 21 genes 0 species
1 species UBERON:0005363012101
female reproductive system 1.0041.519 genes 0 gene
13 genes 9 species 0 species
UBERON:0000474901390
kidney epithelium -1.0057.470 gene
1 gene 21 genes 0 species
1 species UBERON:0004819012101
pancreas 0.5057.973 genes 1 gene 18 genes 3 species 1 species UBERON:0001264311831
upper leg skin -1.0044.010 gene
1 gene 21 genes 0 species
1 species UBERON:0004262012101
limb, paired fin 1.0020.679 genes 0 gene
13 genes 9 species 0 species
UBERON:0002101, UBERON:0002534901390
face 1.0060.703 genes 0 gene
19 genes 3 species 0 species
UBERON:0001456301930
blood vessel 0.6058.314 genes 1 gene 17 genes 4 species 1 species UBERON:0001981411741
putamen 1.0058.411 gene 0 gene
21 genes 1 species 0 species
UBERON:0001874102110
telencephalon 1.0061.8215 genes 0 gene
7 genes 15 species 0 species
UBERON:00018931507150
eyeball of camera-type eye 1.0025.383 genes 0 gene
19 genes 3 species 0 species
UBERON:0010230301930
right ovary 1.0054.401 gene 0 gene
21 genes 1 species 0 species
UBERON:0002118102110
testis 0.3364.0414 genes 7 genes 1 gene 13 species 7 species UBERON:00004731471137
autopod skin 1.0030.381 gene 0 gene
21 genes 1 species 0 species
UBERON:0015790102110
multi-cellular organism 1.0053.9222 genes 0 gene
0 gene
21 species 0 species
UBERON:00004682200210
ventricular zone 1.0040.952 genes 0 gene
20 genes 2 species 0 species
UBERON:0003053202020
embryonic post-anal tail -1.0018.030 gene
2 genes 20 genes 0 species
2 species UBERON:0007144022002
peripheral nervous system 0.0059.591 gene 1 gene 20 genes 1 species 1 species UBERON:0000010112011
central nervous system 1.0066.1522 genes 0 gene
0 gene
21 species 0 species
UBERON:00010172200210
fibroblast -1.0027.150 gene
4 genes 18 genes 0 species
4 species CL:0000057041804
mesonephros 1.0020.902 genes 0 gene
20 genes 2 species 0 species
UBERON:0000080202020
head 1.0061.397 genes 0 gene
15 genes 6 species 0 species
UBERON:0000033701560
tongue muscle 1.0057.061 gene 0 gene
21 genes 1 species 0 species
UBERON:0000378102110
trigeminal ganglion -1.0041.590 gene
1 gene 21 genes 0 species
1 species UBERON:0001675012101
forebrain 1.0042.6215 genes 0 gene
7 genes 15 species 0 species
UBERON:00018901507150
vertebral column -1.0046.040 gene
1 gene 21 genes 0 species
1 species UBERON:0001130012101
caecum -0.3341.141 gene 2 genes 19 genes 1 species 2 species UBERON:0001153121912
diencephalon 1.0072.346 genes 0 gene
16 genes 6 species 0 species
UBERON:0001894601660
heart left ventricle, primary heart field 1.0092.594 genes 0 gene
18 genes 4 species 0 species
UBERON:0002084, UBERON:0004140401840
olfactory bulb 1.0065.152 genes 0 gene
20 genes 2 species 0 species
UBERON:0002264202020
lens of camera-type eye 1.0026.081 gene 0 gene
21 genes 1 species 0 species
UBERON:0000965102110
ear 0.0067.291 gene 1 gene 20 genes 1 species 1 species UBERON:0001690112011
brain 1.0086.8322 genes 0 gene
0 gene
21 species 0 species
UBERON:00009552200210
collection of basal ganglia 1.0055.543 genes 0 gene
19 genes 3 species 0 species
UBERON:0010011301930
smooth muscle tissue 1.0097.313 genes 0 gene
19 genes 3 species 0 species
UBERON:0001135301930
upper arm skin -1.0055.580 gene
1 gene 21 genes 0 species
1 species UBERON:0004263012101
heart right ventricle 0.0088.581 gene 1 gene 20 genes 1 species 1 species UBERON:0002080112011
lip 1.0057.591 gene 0 gene
21 genes 1 species 0 species
UBERON:0001833102110
gonad 1.0061.5217 genes 0 gene
5 genes 16 species 0 species
UBERON:00009911705160
skin of hip -1.0054.290 gene
1 gene 21 genes 0 species
1 species UBERON:0001554012101
female gonad 0.0755.328 genes 7 genes 7 genes 8 species 6 species UBERON:000099287786
internal ear -1.0084.490 gene
1 gene 21 genes 0 species
1 species UBERON:0001846012101
ileum -0.2051.222 genes 3 genes 17 genes 2 species 3 species UBERON:0002116231723
mitral valve 1.0067.351 gene 0 gene
21 genes 1 species 0 species
UBERON:0002135102110
cartilage tissue 0.0043.081 gene 1 gene 20 genes 1 species 1 species UBERON:0002418112011
thyroid gland -0.2076.182 genes 3 genes 17 genes 2 species 3 species UBERON:0002046231723
adenohypophysis 0.0036.991 gene 1 gene 20 genes 1 species 1 species UBERON:0002196112011
midbrain tegmentum -1.0060.850 gene
1 gene 21 genes 0 species
1 species UBERON:0001943012101
larva 1.0041.852 genes 0 gene
20 genes 1 species 0 species
UBERON:0002548202010
cerebellum 1.0078.9815 genes 0 gene
7 genes 15 species 0 species
UBERON:00020371507150
fundus of stomach 1.0049.771 gene 0 gene
21 genes 1 species 0 species
UBERON:0001160102110
cardiac ventricle 0.6056.214 genes 1 gene 17 genes 4 species 1 species UBERON:0002082411741
camera-type eye 1.0086.993 genes 0 gene
19 genes 3 species 0 species
UBERON:0000019301930
caudal tuberculum, substantia nigra 1.0061.261 gene 0 gene
21 genes 1 species 0 species
UBERON:2000633, UBERON:0002038102110
choroid plexus 0.0094.051 gene 1 gene 20 genes 1 species 1 species UBERON:0001886112011
thymus -0.2041.482 genes 3 genes 17 genes 2 species 3 species UBERON:0002370231723
forelimb, pectoral fin 1.0076.384 genes 0 gene
18 genes 4 species 0 species
UBERON:0002102, UBERON:0000151401840
tendon 1.0047.111 gene 0 gene
21 genes 1 species 0 species
UBERON:0000043102110
olfactory cortex -1.0056.240 gene
1 gene 21 genes 0 species
1 species UBERON:0002894012101
right cardiac atrium 1.0084.512 genes 0 gene
20 genes 2 species 0 species
UBERON:0002078202020
endocardial endothelium 1.0029.421 gene 0 gene
21 genes 1 species 0 species
UBERON:0005316102110
calcareous tooth -1.0063.140 gene
1 gene 21 genes 0 species
1 species UBERON:0001091012101
Ammon's horn 1.0074.924 genes 0 gene
18 genes 4 species 0 species
UBERON:0001954401840
epiblast (generic) -1.0017.630 gene
1 gene 21 genes 0 species
1 species UBERON:0002532012101
adrenal cortex 1.0041.812 genes 0 gene
20 genes 2 species 0 species
UBERON:0001235202020
brainstem 1.0054.722 genes 0 gene
20 genes 2 species 0 species
UBERON:0002298202020
aorta 1.0052.253 genes 0 gene
19 genes 3 species 0 species
UBERON:0000947301930
right kidney 1.0040.221 gene 0 gene
21 genes 1 species 0 species
UBERON:0004539102110
retina -0.2087.992 genes 3 genes 17 genes 2 species 3 species UBERON:0000966231723
intestine 0.5630.547 genes 2 genes 13 genes 7 species 1 species UBERON:0000160721371
esophagus 0.5064.683 genes 1 gene 18 genes 3 species 1 species UBERON:0001043311831
myocardium 0.0046.161 gene 1 gene 20 genes 1 species 1 species UBERON:0002349112011
blastula 0.2032.693 genes 2 genes 17 genes 3 species 1 species UBERON:0000307321731
right testis -1.0028.970 gene
1 gene 21 genes 0 species
1 species UBERON:0004534012101
blood -0.4336.332 genes 5 genes 15 genes 2 species 5 species UBERON:0000178251525
adipose tissue 0.6742.545 genes 1 gene 16 genes 5 species 1 species UBERON:0001013511651
embryonic head -1.001.750 gene
1 gene 21 genes 0 species
1 species UBERON:0008816012101
skeletal muscle tissue 1.0097.3013 genes 0 gene
9 genes 13 species 0 species
UBERON:00011341309130
integumental system 1.0062.049 genes 0 gene
13 genes 9 species 0 species
UBERON:0002416901390
cardiovascular system 1.0055.1419 genes 0 gene
3 genes 18 species 0 species
UBERON:00045351903180
spleen 0.1739.197 genes 5 genes 10 genes 7 species 4 species UBERON:0002106751074
kidney 0.9063.8320 genes 1 gene 1 gene 20 species 1 species UBERON:00021132011201
pericardium 0.3341.832 genes 1 gene 19 genes 1 species 1 species UBERON:0002407211911
lung, swim bladder 0.1445.708 genes 6 genes 8 genes 8 species 5 species UBERON:0002048, UBERON:000686086885
cardiac atrium 0.5070.163 genes 1 gene 18 genes 3 species 1 species UBERON:0002081311831
islet of Langerhans 0.0033.331 gene 1 gene 20 genes 1 species 1 species UBERON:0000006112011
neural tube 0.0029.221 gene 1 gene 20 genes 1 species 1 species UBERON:0001049112011
appendicular skeleton -1.0063.630 gene
1 gene 21 genes 0 species
1 species UBERON:0002091012101
pigmented layer of retina -1.0040.590 gene
1 gene 21 genes 0 species
1 species UBERON:0001782012101
cerebellar cortex 1.0077.134 genes 0 gene
18 genes 4 species 0 species
UBERON:0002129401840
cranial ganglion -1.0069.210 gene
1 gene 21 genes 0 species
1 species UBERON:0001714012101
heart 1.0089.4919 genes 0 gene
3 genes 18 species 0 species
UBERON:00009481903180
liver -0.1834.079 genes 13 genes 0 gene
9 species 12 species UBERON:00021079130912
cranium 1.0057.101 gene 0 gene
21 genes 1 species 0 species
UBERON:0003128102110
colon 0.3351.506 genes 3 genes 13 genes 6 species 3 species UBERON:0001155631363
left testis -1.0030.920 gene
1 gene 21 genes 0 species
1 species UBERON:0004533012101
muscle organ 0.8894.9615 genes 1 gene 6 genes 15 species 1 species UBERON:00016301516151
striatum 1.0068.562 genes 0 gene
20 genes 2 species 0 species
UBERON:0002435202020
neurohypophysis 1.0038.551 gene 0 gene
21 genes 1 species 0 species
UBERON:0002198102110
olfactory epithelium -1.0069.850 gene
1 gene 21 genes 0 species
1 species UBERON:0001997012101
meninx 1.0073.671 gene 0 gene
21 genes 1 species 0 species
UBERON:0002360102110
dorsal root ganglion -1.0072.590 gene
2 genes 20 genes 0 species
2 species UBERON:0000044022002
musculature 1.0065.3815 genes 0 gene
7 genes 15 species 0 species
UBERON:00010151507150
gall bladder -1.0041.430 gene
2 genes 20 genes 0 species
2 species UBERON:0002110022002
parathyroid gland, pharyngeal gill 0.0038.371 gene 1 gene 20 genes 1 species 1 species UBERON:0001132, UBERON:0000206112011
renal system 1.0075.3219 genes 0 gene
3 genes 19 species 0 species
UBERON:00010081903190
gingiva -1.0048.930 gene
1 gene 21 genes 0 species
1 species UBERON:0001828012101
peritoneum 1.0041.411 gene 0 gene
21 genes 1 species 0 species
UBERON:0002358102110
zygote -1.0012.870 gene
1 gene 21 genes 0 species
1 species CL:0000365012101
respiratory system 1.0055.5310 genes 0 gene
12 genes 10 species 0 species
UBERON:000100410012100
medulla oblongata -0.3380.291 gene 2 genes 19 genes 1 species 2 species UBERON:0001896121912
pylorus -1.0041.490 gene
1 gene 21 genes 0 species
1 species UBERON:0001166012101
caudate nucleus 1.0056.011 gene 0 gene
21 genes 1 species 0 species
UBERON:0001873102110
embryo 1.0043.8610 genes 0 gene
12 genes 9 species 0 species
UBERON:00009221001290
left ovary 1.0043.791 gene 0 gene
21 genes 1 species 0 species
UBERON:0002119102110

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