We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
gall bladder 0.0063.671 gene 1 gene 6 genes 1 species 1 species UBERON:000211011611
female gonad 0.4368.005 genes 2 genes 1 gene 5 species 2 species UBERON:000099252152
intestine 1.0046.084 genes 0 gene
4 genes 4 species 0 species
UBERON:000016040440
neurohypophysis -1.009.580 gene
1 gene 7 genes 0 species
1 species UBERON:000219801701
penis -1.0058.490 gene
1 gene 7 genes 0 species
1 species UBERON:000098901701
embryo 0.3314.312 genes 1 gene 5 genes 2 species 1 species UBERON:000092221521
adipose tissue 0.3362.972 genes 1 gene 5 genes 2 species 1 species UBERON:000101321521
choroid plexus -1.0023.420 gene
1 gene 7 genes 0 species
1 species UBERON:000188601701
smooth muscle tissue 0.0061.281 gene 1 gene 6 genes 1 species 1 species UBERON:000113511611
right lobe of thyroid gland 1.0055.201 gene 0 gene
7 genes 1 species 0 species
UBERON:000111910710
trachea -1.0061.940 gene
2 genes 6 genes 0 species
2 species UBERON:000312602602
dorsal root ganglion 1.0059.101 gene 0 gene
7 genes 1 species 0 species
UBERON:000004410710
intercostal muscle 1.0023.871 gene 0 gene
7 genes 1 species 0 species
UBERON:000111110710
vertebral column -1.0046.040 gene
1 gene 7 genes 0 species
1 species UBERON:000113001701
pericardium -1.0059.340 gene
1 gene 7 genes 0 species
1 species UBERON:000240701701
retina 0.0035.182 genes 2 genes 4 genes 2 species 2 species UBERON:000096622422
pigmented layer of retina 1.0060.951 gene 0 gene
7 genes 1 species 0 species
UBERON:000178210710
thymus 0.0058.772 genes 2 genes 4 genes 2 species 2 species UBERON:000237022422
aorta 0.0059.381 gene 1 gene 6 genes 1 species 1 species UBERON:000094711611
parotid gland -1.0059.200 gene
1 gene 7 genes 0 species
1 species UBERON:000183101701
striatum 1.0064.472 genes 0 gene
6 genes 2 species 0 species
UBERON:000243520620
tendon -1.0053.050 gene
1 gene 7 genes 0 species
1 species UBERON:000004301701
cardiac atrium 0.0059.121 gene 1 gene 6 genes 1 species 1 species UBERON:000208111611
head 1.0015.156 genes 0 gene
2 genes 6 species 0 species
UBERON:000003360260
globus pallidus -1.0059.050 gene
1 gene 7 genes 0 species
1 species UBERON:000187501701
lung 0.6777.675 genes 1 gene 2 genes 5 species 1 species UBERON:000204851251
Wulst, primary visual cortex 1.0058.972 genes 0 gene
6 genes 2 species 0 species
UBERON:0014756, UBERON:000243620620
metanephros 0.0069.761 gene 1 gene 6 genes 1 species 1 species UBERON:000008111611
inferior vagus X ganglion 1.0058.631 gene 0 gene
7 genes 1 species 0 species
UBERON:000536310710
stomach 0.5049.433 genes 1 gene 4 genes 3 species 1 species UBERON:000094531431
skeletal muscle tissue 0.0065.823 genes 3 genes 2 genes 3 species 3 species UBERON:000113433233
neural tube 1.0030.301 gene 0 gene
7 genes 1 species 0 species
UBERON:000104910710
testis 0.0057.954 genes 4 genes 0 gene
4 species 4 species UBERON:000047344044
eyeball of camera-type eye 1.0054.533 genes 0 gene
5 genes 3 species 0 species
UBERON:001023030530
caudate nucleus 1.0059.301 gene 0 gene
7 genes 1 species 0 species
UBERON:000187310710
medulla oblongata 1.0058.641 gene 0 gene
7 genes 1 species 0 species
UBERON:000189610710
adrenal gland -0.3371.802 genes 4 genes 2 genes 2 species 4 species UBERON:000236924224
left cardiac atrium -1.008.390 gene
1 gene 7 genes 0 species
1 species UBERON:000207901701
gingiva -1.0060.780 gene
1 gene 7 genes 0 species
1 species UBERON:000182801701
right cardiac atrium 0.008.441 gene 1 gene 6 genes 1 species 1 species UBERON:000207811611
pituitary gland 0.5060.633 genes 1 gene 4 genes 3 species 1 species UBERON:000000731431
milk 1.0023.541 gene 0 gene
7 genes 1 species 0 species
UBERON:000191310710
heart 0.7155.586 genes 1 gene 1 gene 6 species 1 species UBERON:000094861161
liver 0.2556.265 genes 3 genes 0 gene
5 species 3 species UBERON:000210753053
skin of leg 1.0053.021 gene 0 gene
7 genes 1 species 0 species
UBERON:000151110710
right testis 1.0063.841 gene 0 gene
7 genes 1 species 0 species
UBERON:000453410710
adrenal cortex 0.0059.511 gene 1 gene 6 genes 1 species 1 species UBERON:000123511611
retinal neural layer 1.0069.171 gene 0 gene
7 genes 1 species 0 species
UBERON:000390210710
colon 0.2054.363 genes 2 genes 3 genes 3 species 2 species UBERON:000115532332
yolk sac 1.0052.421 gene 0 gene
7 genes 1 species 0 species
UBERON:000104010710
laryngeal cartilage -1.0013.830 gene
1 gene 7 genes 0 species
1 species UBERON:000173901701
small intestine 0.5063.973 genes 1 gene 4 genes 3 species 1 species UBERON:000210831431
tongue -1.0058.590 gene
3 genes 5 genes 0 species
3 species UBERON:000172303503
hypothalamus 0.2060.743 genes 2 genes 3 genes 3 species 2 species UBERON:000189832332
saliva-secreting gland -0.3367.871 gene 2 genes 5 genes 1 species 2 species UBERON:000104412512
zygote 1.0050.311 gene 0 gene
7 genes 1 species 0 species
CL:000036510710
peritoneum 1.0058.681 gene 0 gene
7 genes 1 species 0 species
UBERON:000235810710
cerebellar cortex 1.0063.222 genes 0 gene
6 genes 2 species 0 species
UBERON:000212920620
mitral valve -1.0011.490 gene
1 gene 7 genes 0 species
1 species UBERON:000213501701
bronchial epithelial cell 1.0072.221 gene 0 gene
7 genes 1 species 0 species
CL:000232810710
pancreas 0.0047.962 genes 2 genes 4 genes 2 species 2 species UBERON:000126422422
metanephros cortex 1.0036.561 gene 0 gene
7 genes 1 species 0 species
UBERON:001053310710
substantia nigra 1.0054.781 gene 0 gene
7 genes 1 species 0 species
UBERON:000203810710
heart right ventricle -1.0062.790 gene
2 genes 6 genes 0 species
2 species UBERON:000208002602
ileum -1.0016.470 gene
3 genes 5 genes 0 species
3 species UBERON:000211603503
skin of hip -1.0058.140 gene
1 gene 7 genes 0 species
1 species UBERON:000155401701
pylorus -1.0058.480 gene
1 gene 7 genes 0 species
1 species UBERON:000116601701
infraspinatus muscle, supracoracoideus muscle, supraspinatus muscle -1.0017.030 gene
1 gene 7 genes 0 species
1 species UBERON:0001477, UBERON:0014840, UBERON:000238301701
left ovary 1.0070.581 gene 0 gene
7 genes 1 species 0 species
UBERON:000211910710
putamen 1.0053.891 gene 0 gene
7 genes 1 species 0 species
UBERON:000187410710
cartilage tissue -1.0065.740 gene
2 genes 6 genes 0 species
2 species UBERON:000241802602
mammary duct 1.0068.751 gene 0 gene
7 genes 1 species 0 species
UBERON:000176510710
bronchus 1.0059.941 gene 0 gene
7 genes 1 species 0 species
UBERON:000218510710
oviduct shell gland, uterus 1.0063.354 genes 0 gene
4 genes 4 species 0 species
UBERON:0008975, UBERON:000099540440
left testis 1.0063.671 gene 0 gene
7 genes 1 species 0 species
UBERON:000453310710
hindbrain 1.0048.884 genes 0 gene
4 genes 4 species 0 species
UBERON:000202840440
midbrain 1.0058.792 genes 0 gene
6 genes 2 species 0 species
UBERON:000189120620
gingival epithelium -1.0062.260 gene
1 gene 7 genes 0 species
1 species UBERON:000194901701
tongue muscle -1.0012.560 gene
1 gene 7 genes 0 species
1 species UBERON:000037801701
urinary bladder -0.5060.351 gene 3 genes 4 genes 1 species 3 species UBERON:000125513413
heart left ventricle -0.3361.621 gene 2 genes 5 genes 1 species 2 species UBERON:000208412512
limb 1.0044.242 genes 0 gene
6 genes 2 species 0 species
UBERON:000210120620
fibroblast -1.0032.150 gene
1 gene 7 genes 0 species
1 species CL:000005701701
left lobe of thyroid gland 1.0050.391 gene 0 gene
7 genes 1 species 0 species
UBERON:000112010710
spleen 0.6772.265 genes 1 gene 2 genes 5 species 1 species UBERON:000210651251
large intestine 0.5055.783 genes 1 gene 4 genes 3 species 1 species UBERON:000005931431
kidney 1.0064.788 genes 0 gene
0 gene
8 species 0 species
UBERON:000211380080
blood -0.3366.551 gene 2 genes 5 genes 1 species 2 species UBERON:000017812512
upper leg skin -1.0056.270 gene
1 gene 7 genes 0 species
1 species UBERON:000426201701
amygdala 1.0058.041 gene 0 gene
7 genes 1 species 0 species
UBERON:000187610710
lip -1.0012.270 gene
1 gene 7 genes 0 species
1 species UBERON:000183301701
female reproductive system 1.0063.486 genes 0 gene
2 genes 6 species 0 species
UBERON:000047460260
embryonic head -1.001.750 gene
1 gene 7 genes 0 species
1 species UBERON:000881601701
islet of Langerhans 0.0036.121 gene 1 gene 6 genes 1 species 1 species UBERON:000000611611
right ovary 1.0070.721 gene 0 gene
7 genes 1 species 0 species
UBERON:000211810710
forebrain 1.0042.626 genes 0 gene
2 genes 6 species 0 species
UBERON:000189060260
internal ear 1.0067.951 gene 0 gene
7 genes 1 species 0 species
UBERON:000184610710
Ammon's horn 0.3360.462 genes 1 gene 5 genes 2 species 1 species UBERON:000195421521
neocortex 1.0062.415 genes 0 gene
3 genes 5 species 0 species
UBERON:000195050350
duodenum 0.0062.832 genes 2 genes 4 genes 2 species 2 species UBERON:000211422422
cerebellum 0.3364.024 genes 2 genes 2 genes 4 species 2 species UBERON:000203742242
ventricular zone -1.0033.970 gene
2 genes 6 genes 0 species
2 species UBERON:000305302602
embryonic post-anal tail -1.0052.310 gene
2 genes 6 genes 0 species
2 species UBERON:000714402602
lens of camera-type eye 1.0038.461 gene 0 gene
7 genes 1 species 0 species
UBERON:000096510710
multi-cellular organism 1.0056.978 genes 0 gene
0 gene
8 species 0 species
UBERON:000046880080
oviduct epithelium 1.0058.741 gene 0 gene
7 genes 1 species 0 species
UBERON:000480410710
esophagus 0.5061.003 genes 1 gene 4 genes 3 species 1 species UBERON:000104331431
brain 0.7553.327 genes 1 gene 0 gene
7 species 1 species UBERON:000095571071
cardiac ventricle 1.0058.481 gene 0 gene
7 genes 1 species 0 species
UBERON:000208210710
amniotic fluid -1.0064.280 gene
1 gene 7 genes 0 species
1 species UBERON:000017301701
right kidney 1.0071.041 gene 0 gene
7 genes 1 species 0 species
UBERON:000453910710
caecum 0.0058.961 gene 1 gene 6 genes 1 species 1 species UBERON:000115311611
myocardium -1.0063.670 gene
1 gene 7 genes 0 species
1 species UBERON:000234901701
trigeminal ganglion 1.0058.921 gene 0 gene
7 genes 1 species 0 species
UBERON:000167510710
olfactory bulb 0.0043.371 gene 1 gene 6 genes 1 species 1 species UBERON:000226411611
fundus of stomach 1.0062.641 gene 0 gene
7 genes 1 species 0 species
UBERON:000116010710
jejunum -0.2062.072 genes 3 genes 3 genes 2 species 3 species UBERON:000211523323
cerebral cortex 0.7159.466 genes 1 gene 1 gene 6 species 1 species UBERON:000095661161
ureter -1.0011.880 gene
1 gene 7 genes 0 species
1 species UBERON:000005601701
adenohypophysis 0.0058.801 gene 1 gene 6 genes 1 species 1 species UBERON:000219611611
bone marrow 0.0083.632 genes 2 genes 4 genes 2 species 2 species UBERON:000237122422
epiblast (generic) 1.0046.211 gene 0 gene
7 genes 1 species 0 species
UBERON:000253210710
thyroid gland 0.0053.062 genes 2 genes 4 genes 2 species 2 species UBERON:000204622422

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