We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
gall bladder -1.0044.130 gene
2 genes 14 genes 0 species
2 species UBERON:0002110021402
female gonad -0.0940.885 genes 6 genes 5 genes 5 species 6 species UBERON:000099256556
intestine 0.5050.813 genes 1 gene 12 genes 3 species 1 species UBERON:0000160311231
neurohypophysis -1.0032.070 gene
1 gene 15 genes 0 species
1 species UBERON:0002198011501
penis -1.0041.580 gene
2 genes 14 genes 0 species
2 species UBERON:0000989021402
embryo 1.0043.168 genes 0 gene
8 genes 8 species 0 species
UBERON:000092280880
adipose tissue -0.2042.132 genes 3 genes 11 genes 2 species 3 species UBERON:0001013231123
choroid plexus -1.0023.420 gene
1 gene 15 genes 0 species
1 species UBERON:0001886011501
smooth muscle tissue -1.0028.980 gene
3 genes 13 genes 0 species
3 species UBERON:0001135031303
right lobe of thyroid gland -1.0025.510 gene
1 gene 15 genes 0 species
1 species UBERON:0001119011501
trachea -1.0041.290 gene
2 genes 14 genes 0 species
2 species UBERON:0003126021402
dorsal root ganglion -1.0041.660 gene
1 gene 15 genes 0 species
1 species UBERON:0000044011501
intercostal muscle 1.0028.021 gene 0 gene
15 genes 1 species 0 species
UBERON:0001111101510
vertebral column -1.0046.040 gene
1 gene 15 genes 0 species
1 species UBERON:0001130011501
pericardium -1.0041.830 gene
1 gene 15 genes 0 species
1 species UBERON:0002407011501
pigmented layer of retina -1.0040.590 gene
1 gene 15 genes 0 species
1 species UBERON:0001782011501
retina 0.3352.842 genes 1 gene 13 genes 2 species 1 species UBERON:0000966211321
thymus -1.0043.590 gene
5 genes 11 genes 0 species
5 species UBERON:0002370051105
aorta 0.3341.772 genes 1 gene 13 genes 2 species 1 species UBERON:0000947211321
parotid gland -1.0041.810 gene
1 gene 15 genes 0 species
1 species UBERON:0001831011501
striatum 1.0074.802 genes 0 gene
14 genes 2 species 0 species
UBERON:0002435201420
tendon -1.0041.880 gene
1 gene 15 genes 0 species
1 species UBERON:0000043011501
cardiac atrium -1.0041.810 gene
2 genes 14 genes 0 species
2 species UBERON:0002081021402
head 1.0039.975 genes 0 gene
11 genes 5 species 0 species
UBERON:0000033501150
globus pallidus -1.0041.560 gene
1 gene 15 genes 0 species
1 species UBERON:0001875011501
lung 0.0944.666 genes 5 genes 5 genes 6 species 5 species UBERON:000204865565
Wulst, primary visual cortex 1.0079.353 genes 0 gene
13 genes 3 species 0 species
UBERON:0014756, UBERON:0002436301330
metanephros -1.0041.920 gene
1 gene 15 genes 0 species
1 species UBERON:0000081011501
inferior vagus X ganglion -1.0041.560 gene
1 gene 15 genes 0 species
1 species UBERON:0005363011501
stomach 0.0046.503 genes 3 genes 10 genes 3 species 3 species UBERON:0000945331033
skeletal muscle tissue -0.6450.102 genes 9 genes 5 genes 2 species 9 species UBERON:000113429529
neural tube 1.0079.822 genes 0 gene
14 genes 2 species 0 species
UBERON:0001049201420
testis 0.1389.849 genes 7 genes 0 gene
9 species 7 species UBERON:000047397097
eyeball of camera-type eye 1.0019.843 genes 0 gene
13 genes 3 species 0 species
UBERON:0010230301330
caudate nucleus 1.0052.441 gene 0 gene
15 genes 1 species 0 species
UBERON:0001873101510
medulla oblongata 1.0080.272 genes 0 gene
14 genes 2 species 0 species
UBERON:0001896201420
adrenal gland 0.2055.953 genes 2 genes 11 genes 3 species 2 species UBERON:0002369321132
left cardiac atrium -1.008.390 gene
1 gene 15 genes 0 species
1 species UBERON:0002079011501
gingiva -1.0039.270 gene
1 gene 15 genes 0 species
1 species UBERON:0001828011501
right cardiac atrium -1.008.440 gene
1 gene 15 genes 0 species
1 species UBERON:0002078011501
pituitary gland 1.0081.765 genes 0 gene
11 genes 5 species 0 species
UBERON:0000007501150
milk 1.0045.111 gene 0 gene
15 genes 1 species 0 species
UBERON:0001913101510
heart -0.5735.413 genes 11 genes 2 genes 3 species 11 species UBERON:00009483112311
autopod skin -1.0023.640 gene
1 gene 15 genes 0 species
1 species UBERON:0015790011501
liver -0.6334.193 genes 13 genes 0 gene
3 species 13 species UBERON:00021073130313
skin of leg -1.0028.730 gene
1 gene 15 genes 0 species
1 species UBERON:0001511011501
right testis -1.0027.000 gene
1 gene 15 genes 0 species
1 species UBERON:0004534011501
adrenal cortex 1.0041.812 genes 0 gene
14 genes 2 species 0 species
UBERON:0001235201420
retinal neural layer 1.0075.881 gene 0 gene
15 genes 1 species 0 species
UBERON:0003902101510
colon -0.5039.242 genes 6 genes 8 genes 2 species 6 species UBERON:000115526826
yolk sac -1.0027.960 gene
1 gene 15 genes 0 species
1 species UBERON:0001040011501
laryngeal cartilage -1.0013.830 gene
1 gene 15 genes 0 species
1 species UBERON:0001739011501
small intestine 0.0041.622 genes 2 genes 12 genes 2 species 2 species UBERON:0002108221222
tongue -1.0041.280 gene
3 genes 13 genes 0 species
3 species UBERON:0001723031303
saliva-secreting gland -1.0029.660 gene
3 genes 13 genes 0 species
3 species UBERON:0001044031303
hypothalamus 1.0071.495 genes 0 gene
11 genes 5 species 0 species
UBERON:0001898501150
synovial membrane of synovial joint -1.0035.380 gene
1 gene 15 genes 0 species
1 species UBERON:0002018011501
zygote 1.0077.201 gene 0 gene
15 genes 1 species 0 species
CL:0000365101510
peritoneum -1.0041.410 gene
1 gene 15 genes 0 species
1 species UBERON:0002358011501
cerebellar cortex 1.0073.383 genes 0 gene
13 genes 3 species 0 species
UBERON:0002129301330
mitral valve -1.0011.490 gene
1 gene 15 genes 0 species
1 species UBERON:0002135011501
bronchial epithelial cell -1.0041.600 gene
1 gene 15 genes 0 species
1 species CL:0002328011501
pancreas 0.0047.702 genes 2 genes 12 genes 2 species 2 species UBERON:0001264221222
metanephros cortex -1.0011.190 gene
2 genes 14 genes 0 species
2 species UBERON:0010533021402
substantia nigra 1.0052.451 gene 0 gene
15 genes 1 species 0 species
UBERON:0002038101510
heart right ventricle -1.0041.760 gene
2 genes 14 genes 0 species
2 species UBERON:0002080021402
ileum -1.0036.300 gene
4 genes 12 genes 0 species
4 species UBERON:0002116041204
skin of hip -1.0048.070 gene
1 gene 15 genes 0 species
1 species UBERON:0001554011501
pylorus -1.0041.490 gene
1 gene 15 genes 0 species
1 species UBERON:0001166011501
infraspinatus muscle, supracoracoideus muscle, supraspinatus muscle -1.0017.030 gene
1 gene 15 genes 0 species
1 species UBERON:0001477, UBERON:0014840, UBERON:0002383011501
left ovary -1.0030.270 gene
1 gene 15 genes 0 species
1 species UBERON:0002119011501
putamen 1.0051.591 gene 0 gene
15 genes 1 species 0 species
UBERON:0001874101510
cartilage tissue 0.0042.051 gene 1 gene 14 genes 1 species 1 species UBERON:0002418111411
mammary duct -1.0041.950 gene
1 gene 15 genes 0 species
1 species UBERON:0001765011501
bronchus 0.0041.231 gene 1 gene 14 genes 1 species 1 species UBERON:0002185111411
oviduct shell gland, uterus -0.4344.872 genes 5 genes 9 genes 2 species 5 species UBERON:0008975, UBERON:000099525925
hindbrain 1.0075.5413 genes 0 gene
3 genes 13 species 0 species
UBERON:00020281303130
left testis -1.0028.570 gene
1 gene 15 genes 0 species
1 species UBERON:0004533011501
midbrain 1.0073.022 genes 0 gene
14 genes 2 species 0 species
UBERON:0001891201420
gingival epithelium -1.0042.370 gene
1 gene 15 genes 0 species
1 species UBERON:0001949011501
tongue muscle -1.0012.560 gene
1 gene 15 genes 0 species
1 species UBERON:0000378011501
urinary bladder -0.5044.681 gene 3 genes 12 genes 1 species 3 species UBERON:0001255131213
heart left ventricle -0.3328.551 gene 2 genes 13 genes 1 species 2 species UBERON:0002084121312
limb 1.0031.483 genes 0 gene
13 genes 3 species 0 species
UBERON:0002101301330
fibroblast -1.0044.600 gene
3 genes 13 genes 0 species
3 species CL:0000057031303
left lobe of thyroid gland -1.0031.080 gene
1 gene 15 genes 0 species
1 species UBERON:0001120011501
spleen -1.0043.650 gene
9 genes 7 genes 0 species
9 species UBERON:000210609709
large intestine 0.0041.792 genes 2 genes 12 genes 2 species 2 species UBERON:0000059221222
kidney -0.0954.595 genes 6 genes 5 genes 5 species 6 species UBERON:000211356556
blood -0.7136.431 gene 6 genes 9 genes 1 species 6 species UBERON:000017816916
upper leg skin -1.0041.490 gene
1 gene 15 genes 0 species
1 species UBERON:0004262011501
amygdala 1.0079.252 genes 0 gene
14 genes 2 species 0 species
UBERON:0001876201420
lip -1.0038.530 gene
1 gene 15 genes 0 species
1 species UBERON:0001833011501
female reproductive system 1.0041.517 genes 0 gene
9 genes 7 species 0 species
UBERON:000047470970
embryonic head 1.0026.701 gene 0 gene
15 genes 1 species 0 species
UBERON:0008816101510
islet of Langerhans 1.0066.282 genes 0 gene
14 genes 2 species 0 species
UBERON:0000006201420
epithelium of bronchus 1.0034.811 gene 0 gene
15 genes 1 species 0 species
UBERON:0002031101510
forebrain 1.0065.3212 genes 0 gene
4 genes 12 species 0 species
UBERON:00018901204120
right ovary -1.0029.970 gene
1 gene 15 genes 0 species
1 species UBERON:0002118011501
neocortex 1.0042.5812 genes 0 gene
4 genes 12 species 0 species
UBERON:00019501204120
Ammon's horn 1.0076.284 genes 0 gene
12 genes 4 species 0 species
UBERON:0001954401240
duodenum -0.2040.152 genes 3 genes 11 genes 2 species 3 species UBERON:0002114231123
cerebellum 1.0070.8513 genes 0 gene
3 genes 13 species 0 species
UBERON:00020371303130
endocardial endothelium -1.0012.040 gene
1 gene 15 genes 0 species
1 species UBERON:0005316011501
ventricular zone 0.0059.131 gene 1 gene 14 genes 1 species 1 species UBERON:0003053111411
embryonic post-anal tail -1.0018.060 gene
2 genes 14 genes 0 species
2 species UBERON:0007144021402
lens of camera-type eye 1.0064.321 gene 0 gene
15 genes 1 species 0 species
UBERON:0000965101510
multi-cellular organism 1.0041.9916 genes 0 gene
0 gene
16 species 0 species
UBERON:00004681600160
oviduct epithelium -1.0042.010 gene
2 genes 14 genes 0 species
2 species UBERON:0004804021402
esophagus 0.0047.142 genes 2 genes 12 genes 2 species 2 species UBERON:0001043221222
brain 1.0076.7216 genes 0 gene
0 gene
16 species 0 species
UBERON:00009551600160
cardiac ventricle 0.0041.651 gene 1 gene 14 genes 1 species 1 species UBERON:0002082111411
brainstem 1.0077.393 genes 0 gene
13 genes 3 species 0 species
UBERON:0002298301330
amniotic fluid -1.0042.600 gene
1 gene 15 genes 0 species
1 species UBERON:0000173011501
right kidney -1.0015.290 gene
1 gene 15 genes 0 species
1 species UBERON:0004539011501
caecum -0.3341.141 gene 2 genes 13 genes 1 species 2 species UBERON:0001153121312
myocardium 0.0042.451 gene 1 gene 14 genes 1 species 1 species UBERON:0002349111411
trigeminal ganglion -1.0041.590 gene
1 gene 15 genes 0 species
1 species UBERON:0001675011501
olfactory bulb 1.0073.632 genes 0 gene
14 genes 2 species 0 species
UBERON:0002264201420
fundus of stomach -1.0039.570 gene
1 gene 15 genes 0 species
1 species UBERON:0001160011501
jejunum -1.0041.610 gene
5 genes 11 genes 0 species
5 species UBERON:0002115051105
cerebral cortex 1.0081.0012 genes 0 gene
4 genes 12 species 0 species
UBERON:00009561204120
ureter -1.0029.450 gene
1 gene 15 genes 0 species
1 species UBERON:0000056011501
adenohypophysis 1.0052.142 genes 0 gene
14 genes 2 species 0 species
UBERON:0002196201420
bone marrow -1.0040.350 gene
6 genes 10 genes 0 species
6 species UBERON:0002371061006
epiblast (generic) -1.0017.630 gene
1 gene 15 genes 0 species
1 species UBERON:0002532011501
thyroid gland -1.0030.940 gene
3 genes 13 genes 0 species
3 species UBERON:0002046031303

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