We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
tarsal skeleton 1.0054.541 gene 0 gene
16 genes 1 species 0 species
UBERON:0009879101610
thymus 1.0064.614 genes 0 gene
13 genes 3 species 0 species
UBERON:0002370401330
postcranial axial skeleton 1.0081.231 gene 0 gene
16 genes 1 species 0 species
UBERON:0002090101610
otic capsule 1.0065.601 gene 0 gene
16 genes 1 species 0 species
UBERON:0004637101610
hypothalamus 0.3385.904 genes 2 genes 11 genes 4 species 2 species UBERON:0001898421142
endocardial endothelium 1.0059.421 gene 0 gene
16 genes 1 species 0 species
UBERON:0005316101610
Ammon's horn 1.0076.076 genes 0 gene
11 genes 5 species 0 species
UBERON:0001954601150
gastrula 1.0079.012 genes 0 gene
15 genes 2 species 0 species
UBERON:0004734201520
pelvic girdle bone/zone 1.0074.991 gene 0 gene
16 genes 1 species 0 species
UBERON:0007830101610
epiblast (generic) 0.0063.921 gene 1 gene 15 genes 1 species 1 species UBERON:0002532111511
brainstem 0.3339.922 genes 1 gene 14 genes 2 species 1 species UBERON:0002298211421
midbrain 1.0072.193 genes 0 gene
14 genes 2 species 0 species
UBERON:0001891301420
retinal neural layer 0.0062.651 gene 1 gene 15 genes 1 species 1 species UBERON:0003902111511
aorta 1.0080.133 genes 0 gene
14 genes 3 species 0 species
UBERON:0000947301430
right kidney 1.0073.592 genes 0 gene
15 genes 1 species 0 species
UBERON:0004539201510
retina 0.3385.882 genes 1 gene 14 genes 2 species 1 species UBERON:0000966211421
intestine 1.0068.519 genes 0 gene
8 genes 8 species 0 species
UBERON:000016090880
orbitosphenoid 1.0081.231 gene 0 gene
16 genes 1 species 0 species
UBERON:0002478101610
esophagus 1.0074.395 genes 0 gene
12 genes 4 species 0 species
UBERON:0001043501240
blastula 1.0037.474 genes 0 gene
13 genes 4 species 0 species
UBERON:0000307401340
hindbrain 1.0077.2612 genes 0 gene
5 genes 11 species 0 species
UBERON:00020281205110
right testis 1.0060.441 gene 0 gene
16 genes 1 species 0 species
UBERON:0004534101610
blood 1.0072.725 genes 0 gene
12 genes 5 species 0 species
UBERON:0000178501250
adipose tissue 1.0062.525 genes 0 gene
12 genes 5 species 0 species
UBERON:0001013501250
stomach 1.0082.236 genes 0 gene
11 genes 5 species 0 species
UBERON:0000945601150
embryonic head 1.0061.211 gene 0 gene
16 genes 1 species 0 species
UBERON:0008816101610
pituitary gland 0.6094.554 genes 1 gene 12 genes 4 species 1 species UBERON:0000007411241
skeletal muscle tissue 0.4564.098 genes 3 genes 6 genes 8 species 3 species UBERON:000113483683
pancreas 1.0095.914 genes 0 gene
13 genes 3 species 0 species
UBERON:0001264401330
spleen 0.8076.779 genes 1 gene 7 genes 8 species 1 species UBERON:000210691781
kidney 0.8881.7116 genes 1 gene 0 gene
15 species 1 species UBERON:00021131610151
limb, paired fin 1.0087.8910 genes 0 gene
7 genes 9 species 0 species
UBERON:0002101, UBERON:0002534100790
lung epithelium 1.0089.131 gene 0 gene
16 genes 1 species 0 species
UBERON:0000115101610
manus, pectoral fin radial bone 1.0056.501 gene 0 gene
16 genes 1 species 0 species
UBERON:0002398, UBERON:2001586101610
Meckel's cartilage 1.0078.421 gene 0 gene
16 genes 1 species 0 species
UBERON:0003107101610
hyoid bone 1.0059.361 gene 0 gene
16 genes 1 species 0 species
UBERON:0001685101610
lung, swim bladder 0.8279.0510 genes 1 gene 6 genes 9 species 1 species UBERON:0002048, UBERON:0006860101691
cardiac atrium 0.0017.981 gene 1 gene 15 genes 1 species 1 species UBERON:0002081111511
islet of Langerhans 1.0058.873 genes 0 gene
14 genes 2 species 0 species
UBERON:0000006301420
putamen 1.0067.041 gene 0 gene
16 genes 1 species 0 species
UBERON:0001874101610
neural tube 1.0075.513 genes 0 gene
14 genes 2 species 0 species
UBERON:0001049301420
eyeball of camera-type eye 1.0032.244 genes 0 gene
13 genes 3 species 0 species
UBERON:0010230401330
right ovary 1.0077.051 gene 0 gene
16 genes 1 species 0 species
UBERON:0002118101610
testis 0.5367.5213 genes 4 genes 0 gene
12 species 4 species UBERON:00004731340124
autopod skin 1.0048.751 gene 0 gene
16 genes 1 species 0 species
UBERON:0015790101610
multi-cellular organism 1.0078.9217 genes 0 gene
0 gene
16 species 0 species
UBERON:00004681700160
ventricular zone 1.0068.313 genes 0 gene
14 genes 2 species 0 species
UBERON:0003053301420
embryonic post-anal tail 0.3367.652 genes 1 gene 14 genes 1 species 1 species UBERON:0007144211411
central nervous system 1.0063.6217 genes 0 gene
0 gene
16 species 0 species
UBERON:00010171700160
fibroblast 0.0056.362 genes 2 genes 13 genes 2 species 2 species CL:0000057221322
cerebellar cortex 0.6072.964 genes 1 gene 12 genes 4 species 1 species UBERON:0002129411241
basioccipital bone 1.0084.271 gene 0 gene
16 genes 1 species 0 species
UBERON:0001692101610
mesonephros 1.0019.252 genes 0 gene
15 genes 2 species 0 species
UBERON:0000080201520
head 1.0074.667 genes 0 gene
10 genes 6 species 0 species
UBERON:0000033701060
heart 1.0068.7515 genes 0 gene
2 genes 14 species 0 species
UBERON:00009481502140
liver 0.7665.4215 genes 2 genes 0 gene
14 species 2 species UBERON:00021071520142
tongue muscle 1.0069.461 gene 0 gene
16 genes 1 species 0 species
UBERON:0000378101610
forebrain 1.0068.1714 genes 0 gene
3 genes 13 species 0 species
UBERON:00018901403130
colon 0.7573.987 genes 1 gene 9 genes 6 species 1 species UBERON:000115571961
vertebral column -1.0046.040 gene
1 gene 16 genes 0 species
1 species UBERON:0001130011601
caecum 0.3367.442 genes 1 gene 14 genes 2 species 1 species UBERON:0001153211421
heart left ventricle, primary heart field 0.3370.272 genes 1 gene 14 genes 2 species 1 species UBERON:0002084, UBERON:0004140211421
olfactory bulb 0.0067.711 gene 1 gene 15 genes 1 species 1 species UBERON:0002264111511
left testis 1.0060.451 gene 0 gene
16 genes 1 species 0 species
UBERON:0004533101610
lens of camera-type eye 1.0067.572 genes 0 gene
15 genes 1 species 0 species
UBERON:0000965201510
brain 1.0082.3417 genes 0 gene
0 gene
16 species 0 species
UBERON:00009551700160
muscle organ 1.0087.9112 genes 0 gene
5 genes 11 species 0 species
UBERON:00016301205110
striatum 0.3355.052 genes 1 gene 14 genes 2 species 1 species UBERON:0002435211421
smooth muscle tissue 1.0076.252 genes 0 gene
15 genes 2 species 0 species
UBERON:0001135201520
neurohypophysis 1.0081.811 gene 0 gene
16 genes 1 species 0 species
UBERON:0002198101610
lip 0.0044.731 gene 1 gene 15 genes 1 species 1 species UBERON:0001833111511
female gonad 0.4595.888 genes 3 genes 6 genes 7 species 3 species UBERON:000099283673
ileum 0.6782.135 genes 1 gene 11 genes 5 species 1 species UBERON:0002116511151
gall bladder 1.0067.032 genes 0 gene
15 genes 2 species 0 species
UBERON:0002110201520
parathyroid gland, pharyngeal gill 1.0090.991 gene 0 gene
16 genes 1 species 0 species
UBERON:0001132, UBERON:0000206101610
thyroid gland 1.0066.523 genes 0 gene
14 genes 3 species 0 species
UBERON:0002046301430
scapula 1.0068.741 gene 0 gene
16 genes 1 species 0 species
UBERON:0006849101610
adenohypophysis 1.0093.902 genes 0 gene
15 genes 2 species 0 species
UBERON:0002196201520
nasolacrimal duct, posterior naris 1.0052.481 gene 0 gene
16 genes 1 species 0 species
UBERON:0002392, UBERON:2001426101610
zygote 0.0043.091 gene 1 gene 15 genes 1 species 1 species CL:0000365111511
larva 1.0089.571 gene 0 gene
16 genes 1 species 0 species
UBERON:0002548101610
bone element 1.0051.228 genes 0 gene
9 genes 7 species 0 species
UBERON:000147480970
cerebellum 1.0076.1812 genes 0 gene
5 genes 11 species 0 species
UBERON:00020371205110
fundus of stomach 1.0077.451 gene 0 gene
16 genes 1 species 0 species
UBERON:0001160101610
medulla oblongata -1.005.600 gene
1 gene 16 genes 0 species
1 species UBERON:0001896011601
caudate nucleus 1.0066.891 gene 0 gene
16 genes 1 species 0 species
UBERON:0001873101610
embryo 0.8086.779 genes 1 gene 7 genes 8 species 1 species UBERON:000092291781
left ovary 1.0075.021 gene 0 gene
16 genes 1 species 0 species
UBERON:0002119101610
caudal tuberculum, substantia nigra 1.0064.661 gene 0 gene
16 genes 1 species 0 species
UBERON:2000633, UBERON:0002038101610
choroid plexus -1.0023.420 gene
1 gene 16 genes 0 species
1 species UBERON:0001886011601

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