We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
mammillary body -1.0041.270 gene
1 gene 16 genes 0 species
1 species UBERON:0002206011601
optic fissure -1.0040.620 gene
1 gene 16 genes 0 species
1 species UBERON:0005412011601
epithelial cell of pancreas 1.0052.801 gene 0 gene
16 genes 1 species 0 species
CL:0000083101610
semi-lunar valve 1.0066.851 gene 0 gene
16 genes 1 species 0 species
UBERON:0005623101610
inferior olivary complex 1.0049.111 gene 0 gene
16 genes 1 species 0 species
UBERON:0002127101610
brain blood vessel 1.0056.941 gene 0 gene
16 genes 1 species 0 species
UBERON:0003499101610
hypothalamus 1.0068.805 genes 0 gene
12 genes 5 species 0 species
UBERON:0001898501250
gingival epithelium 1.0061.191 gene 0 gene
16 genes 1 species 0 species
UBERON:0001949101610
gastrula 0.3382.472 genes 1 gene 14 genes 2 species 1 species UBERON:0004734211421
otic placode -1.0047.580 gene
1 gene 16 genes 0 species
1 species UBERON:0003069011601
cleaving embryo 1.0050.231 gene 0 gene
16 genes 1 species 0 species
UBERON:0007010101610
midbrain 1.0054.082 genes 0 gene
15 genes 2 species 0 species
UBERON:0001891201520
retinal neural layer 1.0067.591 gene 0 gene
16 genes 1 species 0 species
UBERON:0003902101610
cornea 1.0056.631 gene 0 gene
16 genes 1 species 0 species
UBERON:0000964101610
hindbrain 1.0056.2612 genes 0 gene
5 genes 12 species 0 species
UBERON:00020281205120
cranial nerve II 0.0073.051 gene 1 gene 15 genes 1 species 1 species UBERON:0000941111511
stomach 1.0072.785 genes 0 gene
12 genes 5 species 0 species
UBERON:0000945501250
pituitary gland 1.0078.406 genes 0 gene
11 genes 6 species 0 species
UBERON:0000007601160
inferior vagus X ganglion 1.0044.961 gene 0 gene
16 genes 1 species 0 species
UBERON:0005363101610
female reproductive system 1.0081.0014 genes 0 gene
3 genes 14 species 0 species
UBERON:00004741403140
epithelium of esophagus 1.0053.231 gene 0 gene
16 genes 1 species 0 species
UBERON:0001976101610
pancreas 1.0060.204 genes 0 gene
13 genes 4 species 0 species
UBERON:0001264401340
kidney epithelium 0.0048.461 gene 1 gene 15 genes 1 species 1 species UBERON:0004819111511
upper leg skin 1.0061.661 gene 0 gene
16 genes 1 species 0 species
UBERON:0004262101610
extra-ocular muscle 1.0055.981 gene 0 gene
16 genes 1 species 0 species
UBERON:0001601101610
limb, paired fin 1.0046.008 genes 0 gene
9 genes 8 species 0 species
UBERON:0002101, UBERON:000253480980
manus, pectoral fin radial bone -1.0046.240 gene
1 gene 16 genes 0 species
1 species UBERON:0002398, UBERON:2001586011601
putamen 1.0071.001 gene 0 gene
16 genes 1 species 0 species
UBERON:0001874101610
telencephalon 1.0058.3313 genes 0 gene
4 genes 13 species 0 species
UBERON:00018931304130
utricle of membranous labyrinth 1.0061.161 gene 0 gene
16 genes 1 species 0 species
UBERON:0001853101610
eyeball of camera-type eye 1.0069.595 genes 0 gene
12 genes 5 species 0 species
UBERON:0010230501250
right ovary 1.0080.721 gene 0 gene
16 genes 1 species 0 species
UBERON:0002118101610
testis 0.7662.0915 genes 2 genes 0 gene
15 species 2 species UBERON:00004731520152
male reproductive system 1.0055.1515 genes 0 gene
2 genes 15 species 0 species
UBERON:00000791502150
autopod skin 1.0044.831 gene 0 gene
16 genes 1 species 0 species
UBERON:0015790101610
multi-cellular organism 1.0080.0817 genes 0 gene
0 gene
17 species 0 species
UBERON:00004681700170
ventricular zone 1.0075.292 genes 0 gene
15 genes 2 species 0 species
UBERON:0003053201520
skin epidermis 1.0038.632 genes 0 gene
15 genes 2 species 0 species
UBERON:0001003201520
embryonic post-anal tail 1.0056.512 genes 0 gene
15 genes 2 species 0 species
UBERON:0007144201520
peripheral nervous system 1.0049.992 genes 0 gene
15 genes 2 species 0 species
UBERON:0000010201520
central nervous system 1.0070.7617 genes 0 gene
0 gene
17 species 0 species
UBERON:00010171700170
fibroblast 1.0097.733 genes 0 gene
14 genes 3 species 0 species
CL:0000057301430
mesonephros 1.0036.443 genes 0 gene
14 genes 3 species 0 species
UBERON:0000080301430
iris 1.0054.091 gene 0 gene
16 genes 1 species 0 species
UBERON:0001769101610
head 1.0068.338 genes 0 gene
9 genes 8 species 0 species
UBERON:000003380980
choroid plexus epithelium 1.0095.782 genes 0 gene
15 genes 2 species 0 species
UBERON:0003911201520
tongue muscle -1.0035.880 gene
1 gene 16 genes 0 species
1 species UBERON:0000378011601
trigeminal ganglion 1.0095.072 genes 0 gene
15 genes 2 species 0 species
UBERON:0001675201520
forebrain 1.0059.0213 genes 0 gene
4 genes 13 species 0 species
UBERON:00018901304130
vertebral column -1.0046.040 gene
1 gene 16 genes 0 species
1 species UBERON:0001130011601
caecum 0.0041.141 gene 1 gene 15 genes 1 species 1 species UBERON:0001153111511
diencephalon 1.0074.976 genes 0 gene
11 genes 6 species 0 species
UBERON:0001894601160
olfactory bulb 1.0083.003 genes 0 gene
14 genes 3 species 0 species
UBERON:0002264301430
heart left ventricle, primary heart field 0.0070.452 genes 2 genes 13 genes 2 species 2 species UBERON:0002084, UBERON:0004140221322
lens of camera-type eye 1.0054.601 gene 0 gene
16 genes 1 species 0 species
UBERON:0000965101610
ear 1.0057.773 genes 0 gene
14 genes 3 species 0 species
UBERON:0001690301430
brain 1.0069.5817 genes 0 gene
0 gene
17 species 0 species
UBERON:00009551700170
collection of basal ganglia 1.0072.212 genes 0 gene
15 genes 2 species 0 species
UBERON:0010011201520
male germ cell 1.0049.304 genes 0 gene
13 genes 4 species 0 species
CL:0000015401340
upper arm skin -1.0049.030 gene
1 gene 16 genes 0 species
1 species UBERON:0004263011601
smooth muscle tissue 0.0078.352 genes 2 genes 13 genes 2 species 2 species UBERON:0001135221322
heart right ventricle -1.0064.700 gene
3 genes 14 genes 0 species
3 species UBERON:0002080031403
lip 1.0069.791 gene 0 gene
16 genes 1 species 0 species
UBERON:0001833101610
skin of hip -1.0056.430 gene
1 gene 16 genes 0 species
1 species UBERON:0001554011601
female gonad 1.0086.5511 genes 0 gene
6 genes 11 species 0 species
UBERON:00009921106110
internal ear 1.0067.952 genes 0 gene
15 genes 2 species 0 species
UBERON:0001846201520
ileum 0.5064.773 genes 1 gene 13 genes 3 species 1 species UBERON:0002116311331
mitral valve 1.0025.441 gene 0 gene
16 genes 1 species 0 species
UBERON:0002135101610
cartilage tissue 1.0084.713 genes 0 gene
14 genes 3 species 0 species
UBERON:0002418301430
blastopore, primitive streak -1.0040.630 gene
1 gene 16 genes 0 species
1 species UBERON:0000100, UBERON:0004341011601
thyroid gland 0.0078.932 genes 2 genes 13 genes 2 species 2 species UBERON:0002046221322
adenohypophysis 1.0079.243 genes 0 gene
14 genes 3 species 0 species
UBERON:0002196301430
larva 1.0054.491 gene 0 gene
16 genes 1 species 0 species
UBERON:0002548101610
bone element 1.0090.005 genes 0 gene
12 genes 5 species 0 species
UBERON:0001474501250
cerebellum 1.0074.8612 genes 0 gene
5 genes 12 species 0 species
UBERON:00020371205120
fundus of stomach 1.0068.301 gene 0 gene
16 genes 1 species 0 species
UBERON:0001160101610
pineal body 1.0045.511 gene 0 gene
16 genes 1 species 0 species
UBERON:0001905101610
dermis 1.0055.581 gene 0 gene
16 genes 1 species 0 species
UBERON:0002067101610
cardiac ventricle 1.0055.212 genes 0 gene
15 genes 2 species 0 species
UBERON:0002082201520
outflow tract 1.0054.192 genes 0 gene
15 genes 2 species 0 species
UBERON:0004145201520
saccule of membranous labyrinth -1.0047.220 gene
1 gene 16 genes 0 species
1 species UBERON:0001854011601
caudal tuberculum, substantia nigra 1.0066.792 genes 0 gene
15 genes 2 species 0 species
UBERON:2000633, UBERON:0002038201520
camera-type eye 1.0051.155 genes 0 gene
12 genes 5 species 0 species
UBERON:0000019501250
choroid plexus 0.3365.082 genes 1 gene 14 genes 2 species 1 species UBERON:0001886211421
thymus 0.2051.823 genes 2 genes 12 genes 3 species 2 species UBERON:0002370321232
tendon 1.0046.631 gene 0 gene
16 genes 1 species 0 species
UBERON:0000043101610
motor neuron 1.0042.031 gene 0 gene
16 genes 1 species 0 species
CL:0000100101610
epithelium of lens 1.0039.681 gene 0 gene
16 genes 1 species 0 species
UBERON:0001803101610
right cardiac atrium 1.0034.512 genes 0 gene
15 genes 2 species 0 species
UBERON:0002078201520
internal carotid artery -1.0040.890 gene
1 gene 16 genes 0 species
1 species UBERON:0001532011601
1st arch mandibular component -1.0041.150 gene
1 gene 16 genes 0 species
1 species UBERON:0007237011601
Ammon's horn 1.0068.233 genes 0 gene
14 genes 3 species 0 species
UBERON:0001954301430
epiblast (generic) 1.0050.001 gene 0 gene
16 genes 1 species 0 species
UBERON:0002532101610
adrenal cortex 1.0044.522 genes 0 gene
15 genes 2 species 0 species
UBERON:0001235201520
sternocleidomastoid 1.0049.741 gene 0 gene
16 genes 1 species 0 species
UBERON:0001128101610
brainstem 1.0053.243 genes 0 gene
14 genes 3 species 0 species
UBERON:0002298301430
aorta 0.0042.312 genes 2 genes 13 genes 2 species 2 species UBERON:0000947221322
right kidney 1.0035.991 gene 0 gene
16 genes 1 species 0 species
UBERON:0004539101610
retina 0.6055.294 genes 1 gene 12 genes 4 species 1 species UBERON:0000966411241
somite -1.0041.230 gene
1 gene 16 genes 0 species
1 species UBERON:0002329011601
intestine 1.0067.158 genes 0 gene
9 genes 8 species 0 species
UBERON:000016080980
esophagus 1.0077.844 genes 0 gene
13 genes 4 species 0 species
UBERON:0001043401340
myocardium -1.0043.250 gene
1 gene 16 genes 0 species
1 species UBERON:0002349011601
blastula 0.5046.773 genes 1 gene 13 genes 3 species 1 species UBERON:0000307311331
right testis 1.0068.541 gene 0 gene
16 genes 1 species 0 species
UBERON:0004534101610
blood 0.3362.584 genes 2 genes 11 genes 4 species 2 species UBERON:0000178421142
adipose tissue 0.2052.623 genes 2 genes 12 genes 3 species 2 species UBERON:0001013321232
embryonic head 1.0030.351 gene 0 gene
16 genes 1 species 0 species
UBERON:0008816101610
skeletal muscle tissue -0.2755.094 genes 7 genes 6 genes 4 species 7 species UBERON:000113447647
spleen 1.0071.2310 genes 0 gene
7 genes 10 species 0 species
UBERON:00021061007100
kidney 0.7653.9615 genes 2 genes 0 gene
15 species 2 species UBERON:00021131520152
intestinal epithelium 1.0053.871 gene 0 gene
16 genes 1 species 0 species
UBERON:0001277101610
pericardium 1.0091.042 genes 0 gene
15 genes 2 species 0 species
UBERON:0002407201520
lung, swim bladder 1.0077.9811 genes 0 gene
6 genes 11 species 0 species
UBERON:0002048, UBERON:00068601106110
cardiac atrium 1.0058.004 genes 0 gene
13 genes 4 species 0 species
UBERON:0002081401340
ventral horn of spinal cord 1.0050.761 gene 0 gene
16 genes 1 species 0 species
UBERON:0002257101610
islet of Langerhans 1.0078.022 genes 0 gene
15 genes 2 species 0 species
UBERON:0000006201520
neural tube 1.0045.852 genes 0 gene
15 genes 2 species 0 species
UBERON:0001049201520
pleura 1.0073.201 gene 0 gene
16 genes 1 species 0 species
UBERON:0000977101610
endocardial cushion 1.0077.141 gene 0 gene
16 genes 1 species 0 species
UBERON:0002062101610
cerebral hemisphere 1.0059.4913 genes 0 gene
4 genes 13 species 0 species
UBERON:00018691304130
pigmented layer of retina 0.0049.921 gene 1 gene 15 genes 1 species 1 species UBERON:0001782111511
1st arch maxillary component -1.0041.060 gene
1 gene 16 genes 0 species
1 species UBERON:0007238011601
cerebellar cortex 1.0078.914 genes 0 gene
13 genes 4 species 0 species
UBERON:0002129401340
heart 0.6083.8612 genes 3 genes 2 genes 12 species 3 species UBERON:00009481232123
liver 0.7670.3415 genes 2 genes 0 gene
15 species 2 species UBERON:00021071520152
colon 0.7562.667 genes 1 gene 9 genes 7 species 1 species UBERON:000115571971
left testis 1.0067.881 gene 0 gene
16 genes 1 species 0 species
UBERON:0004533101610
muscle organ 1.0050.959 genes 0 gene
8 genes 9 species 0 species
UBERON:000163090890
striatum 1.0053.522 genes 0 gene
15 genes 2 species 0 species
UBERON:0002435201520
myocardium of ventricle -1.0049.930 gene
1 gene 16 genes 0 species
1 species UBERON:0001083011601
neurohypophysis 1.0069.142 genes 0 gene
15 genes 2 species 0 species
UBERON:0002198201520
presomitic mesoderm -1.0044.380 gene
1 gene 16 genes 0 species
1 species UBERON:0003059011601
olfactory epithelium 1.0055.351 gene 0 gene
16 genes 1 species 0 species
UBERON:0001997101610
meninx 1.0078.941 gene 0 gene
16 genes 1 species 0 species
UBERON:0002360101610
dorsal root ganglion 1.0061.432 genes 0 gene
15 genes 2 species 0 species
UBERON:0000044201520
aortic valve 1.0042.311 gene 0 gene
16 genes 1 species 0 species
UBERON:0002137101610
ciliary body 0.0051.741 gene 1 gene 15 genes 1 species 1 species UBERON:0001775111511
ear vesicle 1.0067.761 gene 0 gene
16 genes 1 species 0 species
UBERON:0003051101610
gall bladder 1.0075.662 genes 0 gene
15 genes 2 species 0 species
UBERON:0002110201520
atrioventricular valve 1.0071.562 genes 0 gene
15 genes 2 species 0 species
UBERON:0002133201520
parathyroid gland, pharyngeal gill 1.0068.421 gene 0 gene
16 genes 1 species 0 species
UBERON:0001132, UBERON:0000206101610
gingiva 1.0060.511 gene 0 gene
16 genes 1 species 0 species
UBERON:0001828101610
peritoneum 1.0041.411 gene 0 gene
16 genes 1 species 0 species
UBERON:0002358101610
zygote -1.0045.730 gene
1 gene 16 genes 0 species
1 species CL:0000365011601
medulla oblongata 1.0071.952 genes 0 gene
15 genes 2 species 0 species
UBERON:0001896201520
pylorus -1.0041.490 gene
1 gene 16 genes 0 species
1 species UBERON:0001166011601
caudate nucleus 1.0072.591 gene 0 gene
16 genes 1 species 0 species
UBERON:0001873101610
embryo 1.0052.859 genes 0 gene
8 genes 9 species 0 species
UBERON:000092290890
left ovary 1.0081.711 gene 0 gene
16 genes 1 species 0 species
UBERON:0002119101610

Do not show this banner again