We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

Expression comparison

Compare expression of several genes. If genes belong to several species, comparisons will be performed in homologous organs. Please enter one Ensembl ID per line.

Examples: SRRM4 (brain specific genes) Hoxd12 (development pattern genes)

Results

Results are ordered by default by descendant "Conservation score", then ascendant "Genes with absence of expression", then descendant "Max expression score". The order could be changed by clicking on one column, then press shift and click on another column.

Anatomical entities Conservation score Max expression score Genes with presence of expression Genes with absence of expression Genes with no data Species with presence of expression Species with absence of expression See details Anatomical entity IDs Gene count with presence of expression Gene count with absence of expression Gene count with no data Species count with presence of expression Species count with absence of expression
chordate pharynx -1.0057.880 gene
1 gene 2 genes 0 species
1 species UBERON:000104201201
hindbrain 1.0071.623 genes 0 gene
0 gene
3 species 0 species
UBERON:000202830030
hypothalamus 1.0073.652 genes 0 gene
1 gene 2 species 0 species
UBERON:000189820120
uterine cervix 1.0045.171 gene 0 gene
2 genes 1 species 0 species
UBERON:000000210210
neocortex 1.0062.483 genes 0 gene
0 gene
3 species 0 species
UBERON:000195030030
midbrain 1.0071.881 gene 0 gene
2 genes 1 species 0 species
UBERON:000189110210
ileum 1.0074.522 genes 0 gene
1 gene 2 species 0 species
UBERON:000211620120
thyroid gland 1.0058.262 genes 0 gene
1 gene 2 species 0 species
UBERON:000204620120
retinal neural layer 1.0058.091 gene 0 gene
2 genes 1 species 0 species
UBERON:000390210210
musculature 1.0065.382 genes 0 gene
1 gene 2 species 0 species
UBERON:000101520120
limb 1.0069.532 genes 0 gene
1 gene 2 species 0 species
UBERON:000210120120
cornea -1.0074.990 gene
1 gene 2 genes 0 species
1 species UBERON:000096401201
lymph node 1.0065.781 gene 0 gene
2 genes 1 species 0 species
UBERON:000002910210
urinary bladder 1.0069.791 gene 0 gene
2 genes 1 species 0 species
UBERON:000125510210
telencephalon 1.0063.073 genes 0 gene
0 gene
3 species 0 species
UBERON:000189330030
cranium -1.0053.530 gene
1 gene 2 genes 0 species
1 species UBERON:000312801201
pancreas 1.0079.672 genes 0 gene
1 gene 2 species 0 species
UBERON:000126420120
testis 1.0078.233 genes 0 gene
0 gene
3 species 0 species
UBERON:000047330030
pituitary gland 1.0053.302 genes 0 gene
1 gene 2 species 0 species
UBERON:000000720120
cranial nerve II -1.0059.980 gene
1 gene 2 genes 0 species
1 species UBERON:000094101201
face 1.0060.701 gene 0 gene
2 genes 1 species 0 species
UBERON:000145610210
stomach 1.0089.652 genes 0 gene
1 gene 2 species 0 species
UBERON:000094520120
blood vessel -1.0058.310 gene
1 gene 2 genes 0 species
1 species UBERON:000198101201
collection of basal ganglia 1.0066.651 gene 0 gene
2 genes 1 species 0 species
UBERON:001001110210
heart left ventricle 1.0050.091 gene 0 gene
2 genes 1 species 0 species
UBERON:000208410210
diencephalon 1.0073.662 genes 0 gene
1 gene 2 species 0 species
UBERON:000189420120
embryonic post-anal tail 1.0067.201 gene 0 gene
2 genes 1 species 0 species
UBERON:000714410210
pharyngeal arch 1.0083.331 gene 0 gene
2 genes 1 species 0 species
UBERON:000253910210
middle ear -1.0063.630 gene
1 gene 2 genes 0 species
1 species UBERON:000175601201
multi-cellular organism 1.0097.703 genes 0 gene
0 gene
3 species 0 species
UBERON:000046830030
olfactory bulb 1.0061.851 gene 0 gene
2 genes 1 species 0 species
UBERON:000226410210
undifferentiated genital tubercle 1.0062.751 gene 0 gene
2 genes 1 species 0 species
UBERON:000587610210
forebrain 1.0069.083 genes 0 gene
0 gene
3 species 0 species
UBERON:000189030030
brain 1.0074.673 genes 0 gene
0 gene
3 species 0 species
UBERON:000095530030
fibroblast -1.0044.480 gene
1 gene 2 genes 0 species
1 species CL:000005701201
forelimb -1.0070.820 gene
1 gene 2 genes 0 species
1 species UBERON:000210201201
ureter -1.0067.840 gene
1 gene 2 genes 0 species
1 species UBERON:000005601201
lens of camera-type eye 1.0066.791 gene 0 gene
2 genes 1 species 0 species
UBERON:000096510210
amygdala 1.0069.981 gene 0 gene
2 genes 1 species 0 species
UBERON:000187610210
main bronchus -1.0064.990 gene
1 gene 2 genes 0 species
1 species UBERON:000218201201
central nervous system 1.0060.263 genes 0 gene
0 gene
3 species 0 species
UBERON:000101730030
lung 1.0075.162 genes 0 gene
1 gene 2 species 0 species
UBERON:000204820120
head 1.0074.091 gene 0 gene
2 genes 1 species 0 species
UBERON:000003310210
secondary palatal shelf -1.0056.220 gene
1 gene 2 genes 0 species
1 species UBERON:000561901201
ear 1.0067.291 gene 0 gene
2 genes 1 species 0 species
UBERON:000169010210
choroid plexus 1.0062.751 gene 0 gene
2 genes 1 species 0 species
UBERON:000188610210
Ammon's horn 1.0068.431 gene 0 gene
2 genes 1 species 0 species
UBERON:000195410210
cerebral cortex 1.0053.093 genes 0 gene
0 gene
3 species 0 species
UBERON:000095630030
nervous system 1.0053.683 genes 0 gene
0 gene
3 species 0 species
UBERON:000101630030
cardiac ventricle 0.0056.211 gene 1 gene 1 gene 1 species 1 species UBERON:000208211111
camera-type eye 1.0086.991 gene 0 gene
2 genes 1 species 0 species
UBERON:000001910210
urethra -1.0058.810 gene
1 gene 2 genes 0 species
1 species UBERON:000005701201
peripheral nervous system 1.0059.591 gene 0 gene
2 genes 1 species 0 species
UBERON:000001010210
postcranial axial skeleton 1.0058.711 gene 0 gene
2 genes 1 species 0 species
UBERON:000209010210
uterus 1.0064.212 genes 0 gene
1 gene 2 species 0 species
UBERON:000099520120
lip 1.0064.661 gene 0 gene
2 genes 1 species 0 species
UBERON:000183310210
bone element 1.0064.271 gene 0 gene
2 genes 1 species 0 species
UBERON:000147410210
female gonad 1.0081.993 genes 0 gene
0 gene
3 species 0 species
UBERON:000099230030
placenta 1.0064.821 gene 0 gene
2 genes 1 species 0 species
UBERON:000198710210
cerebellum 1.0078.023 genes 0 gene
0 gene
3 species 0 species
UBERON:000203730030
cochlea -1.0057.460 gene
1 gene 2 genes 0 species
1 species UBERON:000184401201
trachea -1.0062.480 gene
1 gene 2 genes 0 species
1 species UBERON:000312601201
calcareous tooth -1.0063.140 gene
1 gene 2 genes 0 species
1 species UBERON:000109101201
olfactory cortex -1.0056.240 gene
1 gene 2 genes 0 species
1 species UBERON:000289401201
primary visual cortex 1.0068.241 gene 0 gene
2 genes 1 species 0 species
UBERON:000243610210
midbrain tegmentum -1.0060.850 gene
1 gene 2 genes 0 species
1 species UBERON:000194301201
larynx -1.0061.750 gene
1 gene 2 genes 0 species
1 species UBERON:000173701201
esophagus 1.0073.222 genes 0 gene
1 gene 2 species 0 species
UBERON:000104320120
mammary gland 1.0054.861 gene 0 gene
2 genes 1 species 0 species
UBERON:000191110210
heart 1.0080.103 genes 0 gene
0 gene
3 species 0 species
UBERON:000094830030
respiratory system 1.0055.532 genes 0 gene
1 gene 2 species 0 species
UBERON:000100420120
brainstem 1.0081.811 gene 0 gene
2 genes 1 species 0 species
UBERON:000229810210
right kidney 1.0072.231 gene 0 gene
2 genes 1 species 0 species
UBERON:000453910210
intestine 1.0067.142 genes 0 gene
1 gene 2 species 0 species
UBERON:000016020120
retina 1.0060.741 gene 0 gene
2 genes 1 species 0 species
UBERON:000096610210
hindlimb 1.0061.642 genes 0 gene
1 gene 2 species 0 species
UBERON:000210320120
epiblast (generic) 1.0065.901 gene 0 gene
2 genes 1 species 0 species
UBERON:000253210210
bone marrow 1.0041.131 gene 0 gene
2 genes 1 species 0 species
UBERON:000237110210
pons -1.0056.230 gene
1 gene 2 genes 0 species
1 species UBERON:000098801201
jejunum 1.0082.152 genes 0 gene
1 gene 2 species 0 species
UBERON:000211520120
integumental system 1.0055.142 genes 0 gene
1 gene 2 species 0 species
UBERON:000241620120
cardiovascular system 1.0055.143 genes 0 gene
0 gene
3 species 0 species
UBERON:000453530030
saliva-secreting gland 1.0092.731 gene 0 gene
2 genes 1 species 0 species
UBERON:000104410210
gonad 1.0061.523 genes 0 gene
0 gene
3 species 0 species
UBERON:000099130030
yolk sac 1.0070.541 gene 0 gene
2 genes 1 species 0 species
UBERON:000104010210
neural tube 1.0070.251 gene 0 gene
2 genes 1 species 0 species
UBERON:000104910210
spleen 1.0076.232 genes 0 gene
1 gene 2 species 0 species
UBERON:000210620120
skeletal muscle tissue 1.0078.462 genes 0 gene
1 gene 2 species 0 species
UBERON:000113420120
internal ear 1.0051.941 gene 0 gene
2 genes 1 species 0 species
UBERON:000184610210
islet of Langerhans 1.0066.521 gene 0 gene
2 genes 1 species 0 species
UBERON:000000610210
cardiac atrium -1.0056.910 gene
1 gene 2 genes 0 species
1 species UBERON:000208101201
dorsal plus ventral thalamus 1.0062.751 gene 0 gene
2 genes 1 species 0 species
UBERON:000189710210
liver 1.0097.683 genes 0 gene
0 gene
3 species 0 species
UBERON:000210730030
duodenum 1.0081.722 genes 0 gene
1 gene 2 species 0 species
UBERON:000211420120
quadriceps femoris 1.0076.222 genes 0 gene
1 gene 2 species 0 species
UBERON:000137720120
endoderm 1.0081.661 gene 0 gene
2 genes 1 species 0 species
UBERON:000092510210
vagina 1.0061.271 gene 0 gene
2 genes 1 species 0 species
UBERON:000099610210
ventricular zone 1.0057.751 gene 0 gene
2 genes 1 species 0 species
UBERON:000305310210
metanephros -1.0077.690 gene
1 gene 2 genes 0 species
1 species UBERON:000008101201
thymus 1.0080.732 genes 0 gene
1 gene 2 species 0 species
UBERON:000237020120
colon 1.0082.142 genes 0 gene
1 gene 2 species 0 species
UBERON:000115520120
striatum 1.0067.691 gene 0 gene
2 genes 1 species 0 species
UBERON:000243510210
telencephalic ventricle 1.0057.111 gene 0 gene
2 genes 1 species 0 species
UBERON:000228510210
adrenal gland 1.0070.682 genes 0 gene
1 gene 2 species 0 species
UBERON:000236920120
appendicular skeleton -1.0063.630 gene
1 gene 2 genes 0 species
1 species UBERON:000209101201
cranial ganglion -1.0069.210 gene
1 gene 2 genes 0 species
1 species UBERON:000171401201
kidney 1.0075.493 genes 0 gene
0 gene
3 species 0 species
UBERON:000211330030
cerebellar cortex 1.0069.791 gene 0 gene
2 genes 1 species 0 species
UBERON:000212910210
meninx 1.0073.671 gene 0 gene
2 genes 1 species 0 species
UBERON:000236010210
dorsal root ganglion -1.0072.590 gene
1 gene 2 genes 0 species
1 species UBERON:000004401201
medulla oblongata -1.0080.290 gene
1 gene 2 genes 0 species
1 species UBERON:000189601201
renal system 1.0052.703 genes 0 gene
0 gene
3 species 0 species
UBERON:000100830030
tongue 1.0054.731 gene 0 gene
2 genes 1 species 0 species
UBERON:000172310210
zygote 1.0067.691 gene 0 gene
2 genes 1 species 0 species
CL:000036510210
olfactory epithelium 1.0053.361 gene 0 gene
2 genes 1 species 0 species
UBERON:000199710210
embryo 1.0061.091 gene 0 gene
2 genes 1 species 0 species
UBERON:000092210210

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